RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 DYNC1H1Q14204 4646 aaKnown RBP12.06□□□□□ -0.48
TNFSF13-205ENST00000396545 LOC100131303A0A0U1RQF7 123 aa12.05□□□□□ -0.48
TNFSF13-205ENST00000396545 SMAGPQ0VAQ4 97 aa12.05□□□□□ -0.48
TNFSF13-205ENST00000396545 PAX4O43316 350 aa12.05□□□□□ -0.48
TNFSF13-205ENST00000396545 TAL2Q16559 108 aa12.05□□□□□ -0.48
TNFSF13-205ENST00000396545 Q6ZR54 194 aa12.05□□□□□ -0.48
TNFSF13-205ENST00000396545 TAX1BP3O14907 124 aa12.04□□□□□ -0.48
TNFSF13-205ENST00000396545 ZNF25P17030 456 aaPredicted RBP12.04□□□□□ -0.48
TNFSF13-205ENST00000396545 UBE2DNLQ8IWF7 75 aa12.04□□□□□ -0.48
TNFSF13-205ENST00000396545 COX11Q9Y6N1 276 aa12.04□□□□□ -0.48
TNFSF13-205ENST00000396545 TINCRA0A1B0GVN0 87 aa12.03□□□□□ -0.48
TNFSF13-205ENST00000396545 SH2D6Q7Z4S9 175 aa12.03□□□□□ -0.48
TNFSF13-205ENST00000396545 ZNF815PA8K554 130 aa12.02□□□□□ -0.49
TNFSF13-205ENST00000396545 H7C423 109 aa12.02□□□□□ -0.49
TNFSF13-205ENST00000396545 LEPROTO15243 131 aa12.02□□□□□ -0.49
TNFSF13-205ENST00000396545 GYPEP15421 78 aa12.02□□□□□ -0.49
TNFSF13-205ENST00000396545 HTN3P15516 51 aa12.02□□□□□ -0.49
TNFSF13-205ENST00000396545 UBE2D1P51668 147 aa12.02□□□□□ -0.49
TNFSF13-205ENST00000396545 TSPEAR-AS2P59090 65 aa12.02□□□□□ -0.49
TNFSF13-205ENST00000396545 RNASE13Q5GAN3 156 aaKnown RBP12.02□□□□□ -0.49
TNFSF13-205ENST00000396545 TMEM243Q9BU79 118 aa12.02□□□□□ -0.49
TNFSF13-205ENST00000396545 TM2D2Q9BX73 214 aa12.02□□□□□ -0.49
TNFSF13-205ENST00000396545 F5H768 121 aa12.01□□□□□ -0.49
TNFSF13-205ENST00000396545 H3BNG1 76 aa12.01□□□□□ -0.49
TNFSF13-205ENST00000396545 TRAV26-1A0A087WT03 109 aa12.01□□□□□ -0.49
TNFSF13-205ENST00000396545 A6NDN8 102 aa12.01□□□□□ -0.49
TNFSF13-205ENST00000396545 DGAT2L7PQ6IED9 249 aa12.01□□□□□ -0.49
TNFSF13-205ENST00000396545 FAM19A3Q7Z5A8 133 aa12.01□□□□□ -0.49
TNFSF13-205ENST00000396545 CEND1Q8N111 149 aa12.01□□□□□ -0.49
TNFSF13-205ENST00000396545 J3QQQ9 107 aa12□□□□□ -0.49
TNFSF13-205ENST00000396545 ATP6V0E2Q8NHE4 81 aa12□□□□□ -0.49
TNFSF13-205ENST00000396545 IGLV5-45A0A087WSX0 123 aa11.99□□□□□ -0.49
TNFSF13-205ENST00000396545 TIRAPP58753 221 aa11.99□□□□□ -0.49
TNFSF13-205ENST00000396545 MRPL23Q16540 153 aaKnown RBP11.99□□□□□ -0.49
TNFSF13-205ENST00000396545 Q6ZVH6 145 aa11.99□□□□□ -0.49
TNFSF13-205ENST00000396545 PLEKHB2Q96CS7 222 aa11.99□□□□□ -0.49
TNFSF13-205ENST00000396545 VSIG2Q96IQ7 327 aa11.99□□□□□ -0.49
TNFSF13-205ENST00000396545 ABCA13Q86UQ4 5058 aa11.98□□□□□ -0.49
TNFSF13-205ENST00000396545 TRBV6-8A0A0A6YYG3 113 aa11.98□□□□□ -0.49
TNFSF13-205ENST00000396545 GCSHP23434 173 aa11.98□□□□□ -0.49
TNFSF13-205ENST00000396545 FXYD2P54710 66 aa11.98□□□□□ -0.49
TNFSF13-205ENST00000396545 CDC42SE2Q9NRR3 84 aa11.98□□□□□ -0.49
TNFSF13-205ENST00000396545 H3BRM9 83 aa11.97□□□□□ -0.49
TNFSF13-205ENST00000396545 LGALS3P17931 250 aaKnown RBP11.97□□□□□ -0.49
TNFSF13-205ENST00000396545 C15orf53Q8NAA6 179 aa11.96□□□□□ -0.49
TNFSF13-205ENST00000396545 OR5A1Q8NGJ0 315 aa11.96□□□□□ -0.49
TNFSF13-205ENST00000396545 ICOSQ9Y6W8 199 aa11.96□□□□□ -0.49
TNFSF13-205ENST00000396545 A0A0J9YY99 117 aa11.96□□□□□ -0.5
TNFSF13-205ENST00000396545 UBE2L6O14933 153 aa11.96□□□□□ -0.5
TNFSF13-205ENST00000396545 HIST1H4GQ99525 98 aa11.96□□□□□ -0.5
TNFSF13-205ENST00000396545 IGHV1-58A0A0C4DH39 117 aa11.95□□□□□ -0.5
TNFSF13-205ENST00000396545 C1orf134Q5TEV5 83 aa11.95□□□□□ -0.5
TNFSF13-205ENST00000396545 AMMECR1LQ6DCA0 310 aa11.95□□□□□ -0.5
TNFSF13-205ENST00000396545 SCGB1D4Q6XE38 83 aa11.95□□□□□ -0.5
TNFSF13-205ENST00000396545 GEMIN7Q9H840 131 aaKnown RBP11.95□□□□□ -0.5
TNFSF13-205ENST00000396545 SPANXB1Q9NS25 103 aaPredicted RBP11.95□□□□□ -0.5
TNFSF13-205ENST00000396545 K7EP13 123 aa11.94□□□□□ -0.5
TNFSF13-205ENST00000396545 IGHV3-30-3P0DP02 117 aa11.94□□□□□ -0.5
TNFSF13-205ENST00000396545 LINC00242Q5T6M2 205 aa11.94□□□□□ -0.5
TNFSF13-205ENST00000396545 TMEM101Q96IK0 257 aa11.94□□□□□ -0.5
TNFSF13-205ENST00000396545 HERVK_113P63121 156 aa11.93□□□□□ -0.5
TNFSF13-205ENST00000396545 LINC00469Q8N7U9 141 aa11.93□□□□□ -0.5
TNFSF13-205ENST00000396545 IGHV3-64A0A075B6Q5 118 aa11.92□□□□□ -0.5
TNFSF13-205ENST00000396545 C9orf118A6NHY6 69 aa11.92□□□□□ -0.5
TNFSF13-205ENST00000396545 PTTG1IPP53801 180 aa11.92□□□□□ -0.5
TNFSF13-205ENST00000396545 CDKN2A-AS1Q9UH64 79 aa11.92□□□□□ -0.5
TNFSF13-205ENST00000396545 TRAV8-3A0A0A6YYJ7 113 aa11.91□□□□□ -0.5
TNFSF13-205ENST00000396545 SMIM13P0DJ93 91 aa11.91□□□□□ -0.5
TNFSF13-205ENST00000396545 COX6A2Q02221 97 aa11.91□□□□□ -0.5
TNFSF13-205ENST00000396545 GAGE6Q13070 117 aa11.91□□□□□ -0.5
TNFSF13-205ENST00000396545 HSPG2P98160 4391 aa11.9□□□□□ -0.5
TNFSF13-205ENST00000396545 A0A1B0GWB2 263 aa11.9□□□□□ -0.5
TNFSF13-205ENST00000396545 A0A096LPF7 62 aa11.89□□□□□ -0.51
TNFSF13-205ENST00000396545 SPINK8P0C7L1 97 aa11.89□□□□□ -0.51
TNFSF13-205ENST00000396545 C10orf126Q8N4M7 172 aa11.89□□□□□ -0.51
TNFSF13-205ENST00000396545 CHCHD5Q9BSY4 110 aa11.89□□□□□ -0.51
TNFSF13-205ENST00000396545 IGLV5-39A0A0G2JS06 123 aa11.88□□□□□ -0.51
TNFSF13-205ENST00000396545 NBDYA0A0U1RRE5 68 aa11.88□□□□□ -0.51
TNFSF13-205ENST00000396545 NHP2Q9NX24 153 aaKnown RBP11.88□□□□□ -0.51
TNFSF13-205ENST00000396545 IGLV4-60A0A075B6I1 120 aa11.88□□□□□ -0.51
TNFSF13-205ENST00000396545 TRAV13-1A0A0B4J241 112 aa11.88□□□□□ -0.51
TNFSF13-205ENST00000396545 SRSF9Q13242 221 aaKnown RBP eCLIP11.88□□□□□ -0.51
TNFSF13-205ENST00000396545 UBE2V1Q13404 147 aa11.88□□□□□ -0.51
TNFSF13-205ENST00000396545 KRTAP4-5Q9BYR2 181 aa11.88□□□□□ -0.51
TNFSF13-205ENST00000396545 A0A0J9YXY3 114 aa11.87□□□□□ -0.51
TNFSF13-205ENST00000396545 A0A1B0GUV1 79 aa11.87□□□□□ -0.51
TNFSF13-205ENST00000396545 IGHV3-30P01768 117 aa11.87□□□□□ -0.51
TNFSF13-205ENST00000396545 IGHV3-30-5P0DP03 117 aa11.87□□□□□ -0.51
TNFSF13-205ENST00000396545 TNP2Q05952 138 aa11.87□□□□□ -0.51
TNFSF13-205ENST00000396545 LELP1Q5T871 98 aa11.87□□□□□ -0.51
TNFSF13-205ENST00000396545 LRP1BQ9NZR2 4599 aa11.87□□□□□ -0.51
TNFSF13-205ENST00000396545 K7ERJ3 54 aa11.86□□□□□ -0.51
TNFSF13-205ENST00000396545 VAMP3Q15836 100 aa11.86□□□□□ -0.51
TNFSF13-205ENST00000396545 TMEM238LA0A1B0GVL6 79 aa11.85□□□□□ -0.51
TNFSF13-205ENST00000396545 A6NJY4 79 aa11.85□□□□□ -0.51
TNFSF13-205ENST00000396545 C6orf223Q8N319 242 aa11.85□□□□□ -0.51
TNFSF13-205ENST00000396545 RAB37Q96AX2 223 aa11.85□□□□□ -0.51
TNFSF13-205ENST00000396545 NDUFA12Q9UI09 145 aa11.85□□□□□ -0.51
TNFSF13-205ENST00000396545 LINC00588Q9Y4M8 146 aa11.85□□□□□ -0.51
TNFSF13-205ENST00000396545 SMIM1B2RUZ4 78 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms