RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 TMEM242Q9NWH2 141 aa10.71□□□□□ -0.69
EXOSC3-202ENST00000396521 F8WDY8 70 aa10.7□□□□□ -0.7
EXOSC3-202ENST00000396521 PPP1R17O96001 155 aa10.7□□□□□ -0.7
EXOSC3-202ENST00000396521 C1orf137Q5JT78 98 aa10.7□□□□□ -0.7
EXOSC3-202ENST00000396521 SLC7A5P1Q8MH63 180 aa10.7□□□□□ -0.7
EXOSC3-202ENST00000396521 VCYO14598 125 aa10.69□□□□□ -0.7
EXOSC3-202ENST00000396521 IMMP2LQ96T52 175 aa10.69□□□□□ -0.7
EXOSC3-202ENST00000396521 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.68□□□□□ -0.7
EXOSC3-202ENST00000396521 AMN1Q8IY45 258 aa10.68□□□□□ -0.7
EXOSC3-202ENST00000396521 A0A1B0GXF2 115 aa10.67□□□□□ -0.7
EXOSC3-202ENST00000396521 FCER1GP30273 86 aa10.67□□□□□ -0.7
EXOSC3-202ENST00000396521 RPL18AQ02543 176 aaKnown RBP10.67□□□□□ -0.7
EXOSC3-202ENST00000396521 IGLV1-50A0A075B6I6 118 aa10.66□□□□□ -0.7
EXOSC3-202ENST00000396521 IGLV7-43P04211 117 aa10.66□□□□□ -0.7
EXOSC3-202ENST00000396521 OR10D4PQ8NGN7 298 aa10.66□□□□□ -0.7
EXOSC3-202ENST00000396521 TMEM18Q96B42 140 aa10.66□□□□□ -0.7
EXOSC3-202ENST00000396521 TRAV9-1A0A075B6T8 112 aa10.65□□□□□ -0.7
EXOSC3-202ENST00000396521 KIR2DL4Q99706 377 aa10.65□□□□□ -0.7
EXOSC3-202ENST00000396521 MRPL35Q9NZE8 188 aaKnown RBP10.65□□□□□ -0.7
EXOSC3-202ENST00000396521 RAB4AP20338 218 aa10.64□□□□□ -0.71
EXOSC3-202ENST00000396521 FAM104BQ5XKR9 115 aa10.64□□□□□ -0.71
EXOSC3-202ENST00000396521 PHF5AQ7RTV0 110 aaKnown RBP10.64□□□□□ -0.71
EXOSC3-202ENST00000396521 PRR26Q8N8Z3 221 aa10.64□□□□□ -0.71
EXOSC3-202ENST00000396521 TIMM21Q9BVV7 248 aa10.64□□□□□ -0.71
EXOSC3-202ENST00000396521 UBE2D4Q9Y2X8 147 aa10.64□□□□□ -0.71
EXOSC3-202ENST00000396521 A0A087WZ39 114 aa10.63□□□□□ -0.71
EXOSC3-202ENST00000396521 TRAV13-1A0A0B4J241 112 aa10.63□□□□□ -0.71
EXOSC3-202ENST00000396521 A0A0U1RQV1 116 aa10.63□□□□□ -0.71
EXOSC3-202ENST00000396521 H0Y9J4 135 aa10.63□□□□□ -0.71
EXOSC3-202ENST00000396521 SPAG11BQ08648 103 aa10.63□□□□□ -0.71
EXOSC3-202ENST00000396521 SMKR1H3BMG3 65 aa10.62□□□□□ -0.71
EXOSC3-202ENST00000396521 TCAPO15273 167 aa10.62□□□□□ -0.71
EXOSC3-202ENST00000396521 MRPL51Q4U2R6 128 aaKnown RBP10.62□□□□□ -0.71
EXOSC3-202ENST00000396521 C5orf38Q86SI9 138 aa10.62□□□□□ -0.71
EXOSC3-202ENST00000396521 CKS2P33552 79 aa10.61□□□□□ -0.71
EXOSC3-202ENST00000396521 RPL13AP40429 203 aaKnown RBP10.61□□□□□ -0.71
EXOSC3-202ENST00000396521 SUMO2P61956 95 aaKnown RBP10.61□□□□□ -0.71
EXOSC3-202ENST00000396521 LPAP08519 4548 aa10.61□□□□□ -0.71
EXOSC3-202ENST00000396521 TLX1NBP0CAT3 122 aa10.6□□□□□ -0.71
EXOSC3-202ENST00000396521 OPRPNQ99935 248 aaPredicted RBP10.6□□□□□ -0.71
EXOSC3-202ENST00000396521 D6R8Y8 96 aa10.59□□□□□ -0.71
EXOSC3-202ENST00000396521 NDUFA1O15239 70 aa10.59□□□□□ -0.71
EXOSC3-202ENST00000396521 PPBPP02775 128 aa10.58□□□□□ -0.72
EXOSC3-202ENST00000396521 COX19Q49B96 90 aa10.58□□□□□ -0.72
EXOSC3-202ENST00000396521 ORMDL3Q8N138 153 aa10.58□□□□□ -0.72
EXOSC3-202ENST00000396521 UBE2D1P51668 147 aa10.57□□□□□ -0.72
EXOSC3-202ENST00000396521 ORAOV1Q8WV07 137 aa10.57□□□□□ -0.72
EXOSC3-202ENST00000396521 C20orf78Q9BR46 151 aa10.57□□□□□ -0.72
EXOSC3-202ENST00000396521 IGHV3OR16-9A0A0B4J2B5 98 aa10.56□□□□□ -0.72
EXOSC3-202ENST00000396521 RNASE13Q5GAN3 156 aaKnown RBP10.56□□□□□ -0.72
EXOSC3-202ENST00000396521 TMEM136Q6ZRR5 245 aa10.56□□□□□ -0.72
EXOSC3-202ENST00000396521 Q6ZUT4 128 aa10.56□□□□□ -0.72
EXOSC3-202ENST00000396521 NRACQ8N912 160 aa10.56□□□□□ -0.72
EXOSC3-202ENST00000396521 PRELID3AQ96N28 172 aa10.56□□□□□ -0.72
EXOSC3-202ENST00000396521 TGIF2-C20orf24A0A0A6YYL0 155 aa10.55□□□□□ -0.72
EXOSC3-202ENST00000396521 TNFRSF6BO95407 300 aa10.55□□□□□ -0.72
EXOSC3-202ENST00000396521 RPL32P62910 135 aaKnown RBP10.55□□□□□ -0.72
EXOSC3-202ENST00000396521 SMCO4Q9NRQ5 59 aa10.55□□□□□ -0.72
EXOSC3-202ENST00000396521 SPANXA1Q9NS26 97 aa10.55□□□□□ -0.72
EXOSC3-202ENST00000396521 NPYP01303 97 aa10.54□□□□□ -0.72
EXOSC3-202ENST00000396521 PRR4Q16378 134 aa10.54□□□□□ -0.72
EXOSC3-202ENST00000396521 CBLN2Q8IUK8 224 aa10.54□□□□□ -0.72
EXOSC3-202ENST00000396521 GNB1LQ9BYB4 327 aa10.54□□□□□ -0.72
EXOSC3-202ENST00000396521 TRBV24-1A0A075B6N3 115 aa10.53□□□□□ -0.72
EXOSC3-202ENST00000396521 KRTAP1-4P0C5Y4 121 aa10.53□□□□□ -0.72
EXOSC3-202ENST00000396521 MRPS36P82909 103 aaKnown RBP10.53□□□□□ -0.72
EXOSC3-202ENST00000396521 LAMTOR2Q9Y2Q5 125 aa10.53□□□□□ -0.72
EXOSC3-202ENST00000396521 UBE2BP63146 152 aa10.52□□□□□ -0.73
EXOSC3-202ENST00000396521 SMIM2Q9BVW6 85 aa10.52□□□□□ -0.73
EXOSC3-202ENST00000396521 MAP1LC3AQ9H492 121 aa10.52□□□□□ -0.73
EXOSC3-202ENST00000396521 FAM168BA1KXE4 195 aa10.51□□□□□ -0.73
EXOSC3-202ENST00000396521 FAM19A5Q7Z5A7 132 aaPredicted RBP10.51□□□□□ -0.73
EXOSC3-202ENST00000396521 MRPL18Q9H0U6 180 aaKnown RBP10.51□□□□□ -0.73
EXOSC3-202ENST00000396521 TRBV30A0A0K0K1B3 111 aa10.5□□□□□ -0.73
EXOSC3-202ENST00000396521 M0QXV9 152 aa10.5□□□□□ -0.73
EXOSC3-202ENST00000396521 FABP9Q0Z7S8 132 aa10.5□□□□□ -0.73
EXOSC3-202ENST00000396521 KIAA1644Q3SXP7 199 aa10.5□□□□□ -0.73
EXOSC3-202ENST00000396521 GAGE2EQ4V326 116 aa10.5□□□□□ -0.73
EXOSC3-202ENST00000396521 UNQ6190/PRO20217Q6UXQ8 127 aa10.5□□□□□ -0.73
EXOSC3-202ENST00000396521 C6orf48Q9UBA6 75 aa10.5□□□□□ -0.73
EXOSC3-202ENST00000396521 GAGE2DQ9UEU5 116 aa10.5□□□□□ -0.73
EXOSC3-202ENST00000396521 C10orf25Q5T742 122 aa10.49□□□□□ -0.73
EXOSC3-202ENST00000396521 KRTAP11-1Q8IUC1 163 aa10.49□□□□□ -0.73
EXOSC3-202ENST00000396521 TRAPPC1Q9Y5R8 145 aa10.49□□□□□ -0.73
EXOSC3-202ENST00000396521 MUC2Q02817 5179 aa10.49□□□□□ -0.73
EXOSC3-202ENST00000396521 LOC389332A0A1B0GUA5 103 aa10.48□□□□□ -0.73
EXOSC3-202ENST00000396521 IFITM10A6NMD0 228 aa10.48□□□□□ -0.73
EXOSC3-202ENST00000396521 NDUFC2-KCTD14E9PQ53 114 aa10.48□□□□□ -0.73
EXOSC3-202ENST00000396521 RAB5AP20339 215 aa10.47□□□□□ -0.73
EXOSC3-202ENST00000396521 ZNF861PO60384 105 aa10.46□□□□□ -0.73
EXOSC3-202ENST00000396521 RPL39P62891 51 aaKnown RBP10.46□□□□□ -0.73
EXOSC3-202ENST00000396521 FAM104AQ969W3 186 aa10.46□□□□□ -0.73
EXOSC3-202ENST00000396521 PACRGQ96M98 296 aaPredicted RBP10.46□□□□□ -0.73
EXOSC3-202ENST00000396521 YPEL4Q96NS1 127 aa10.46□□□□□ -0.73
EXOSC3-202ENST00000396521 ATP6V1G1O75348 118 aa10.45□□□□□ -0.74
EXOSC3-202ENST00000396521 KIAA0087Q14695 138 aa10.45□□□□□ -0.74
EXOSC3-202ENST00000396521 LINC01561Q8N1V8 128 aa10.45□□□□□ -0.74
EXOSC3-202ENST00000396521 NUPR1O60356 82 aa10.44□□□□□ -0.74
EXOSC3-202ENST00000396521 KRTAP7-1Q8IUC3 87 aa10.44□□□□□ -0.74
EXOSC3-202ENST00000396521 Q8N8P6 123 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms