RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 PYGO1Q9Y3Y4 419 aa11.13□□□□□ -0.63
UPK3A-202ENST00000396082 K7EMI3 77 aa11.12□□□□□ -0.63
UPK3A-202ENST00000396082 SPAG11BQ08648 103 aa11.12□□□□□ -0.63
UPK3A-202ENST00000396082 C2orf66Q6UXQ4 117 aa11.12□□□□□ -0.63
UPK3A-202ENST00000396082 IGLV4-3A0A075B6K6 122 aa11.11□□□□□ -0.63
UPK3A-202ENST00000396082 A0A096LNI7 61 aa11.11□□□□□ -0.63
UPK3A-202ENST00000396082 TGIF2-C20orf24A0A0A6YYL0 155 aa11.11□□□□□ -0.63
UPK3A-202ENST00000396082 Q6ZN92 141 aa11.11□□□□□ -0.63
UPK3A-202ENST00000396082 TEX43Q6ZNM6 134 aa11.11□□□□□ -0.63
UPK3A-202ENST00000396082 C2orf88Q9BSF0 95 aa11.11□□□□□ -0.63
UPK3A-202ENST00000396082 RPS10P5Q9NQ39 176 aa11.11□□□□□ -0.63
UPK3A-202ENST00000396082 SRRM2Q9UQ35 2752 aaKnown RBP11.11□□□□□ -0.63
UPK3A-202ENST00000396082 KRTAP10-4P60372 401 aaPredicted RBP11.1□□□□□ -0.63
UPK3A-202ENST00000396082 RHEBQ15382 184 aa11.1□□□□□ -0.63
UPK3A-202ENST00000396082 Q6ZRU5 148 aa11.1□□□□□ -0.63
UPK3A-202ENST00000396082 STPG4Q8N801 248 aa11.1□□□□□ -0.63
UPK3A-202ENST00000396082 ORAOV1Q8WV07 137 aa11.1□□□□□ -0.63
UPK3A-202ENST00000396082 PLAC8Q9NZF1 115 aa11.1□□□□□ -0.63
UPK3A-202ENST00000396082 LINC00474Q9P2X8 69 aa11.1□□□□□ -0.63
UPK3A-202ENST00000396082 CARHSP1Q9Y2V2 147 aaKnown RBP11.1□□□□□ -0.63
UPK3A-202ENST00000396082 IGHV3OR16-9A0A0B4J2B5 98 aa11.09□□□□□ -0.63
UPK3A-202ENST00000396082 J3QL48 77 aa11.09□□□□□ -0.63
UPK3A-202ENST00000396082 COX19Q49B96 90 aa11.09□□□□□ -0.63
UPK3A-202ENST00000396082 C10orf91Q5T1B1 145 aa11.09□□□□□ -0.63
UPK3A-202ENST00000396082 OR10D4PQ8NGN7 298 aa11.09□□□□□ -0.63
UPK3A-202ENST00000396082 C2orf48Q96LS8 159 aa11.09□□□□□ -0.63
UPK3A-202ENST00000396082 GNB1LQ9BYB4 327 aa11.09□□□□□ -0.63
UPK3A-202ENST00000396082 G0S2P27469 103 aa11.08□□□□□ -0.64
UPK3A-202ENST00000396082 C7orf33Q8WU49 177 aa11.08□□□□□ -0.64
UPK3A-202ENST00000396082 LOC107984640A0A0U1RRK4 108 aa11.07□□□□□ -0.64
UPK3A-202ENST00000396082 VCX2Q9H322 139 aa11.07□□□□□ -0.64
UPK3A-202ENST00000396082 MT-ND6P03923 174 aa11.06□□□□□ -0.64
UPK3A-202ENST00000396082 GAGE2BQ13066 116 aa11.06□□□□□ -0.64
UPK3A-202ENST00000396082 NDUFA5Q16718 116 aa11.06□□□□□ -0.64
UPK3A-202ENST00000396082 LINC00242Q5T6M2 205 aa11.05□□□□□ -0.64
UPK3A-202ENST00000396082 ZC2HC1BQ5TFG8 222 aa11.05□□□□□ -0.64
UPK3A-202ENST00000396082 DMBT1Q9UGM3 2413 aaPredicted RBP11.05□□□□□ -0.64
UPK3A-202ENST00000396082 NDUFA1O15239 70 aa11.04□□□□□ -0.64
UPK3A-202ENST00000396082 APOC3P02656 99 aa11.04□□□□□ -0.64
UPK3A-202ENST00000396082 NPSP0C0P6 89 aa11.04□□□□□ -0.64
UPK3A-202ENST00000396082 UBE2D1P51668 147 aa11.04□□□□□ -0.64
UPK3A-202ENST00000396082 PTTG1IPP53801 180 aa11.04□□□□□ -0.64
UPK3A-202ENST00000396082 RPL18AQ02543 176 aaKnown RBP11.04□□□□□ -0.64
UPK3A-202ENST00000396082 FABP9Q0Z7S8 132 aa11.04□□□□□ -0.64
UPK3A-202ENST00000396082 PAPPA-AS1Q5QFB9 102 aa11.04□□□□□ -0.64
UPK3A-202ENST00000396082 MRPL18Q9H0U6 180 aaKnown RBP11.04□□□□□ -0.64
UPK3A-202ENST00000396082 A0A087WZ39 114 aa11.03□□□□□ -0.64
UPK3A-202ENST00000396082 IGIPA6NJ69 53 aa11.03□□□□□ -0.64
UPK3A-202ENST00000396082 F8WDY8 70 aa11.03□□□□□ -0.64
UPK3A-202ENST00000396082 AMELXQ99217 191 aa11.03□□□□□ -0.64
UPK3A-202ENST00000396082 ALKBH7Q9BT30 221 aaPredicted RBP11.03□□□□□ -0.64
UPK3A-202ENST00000396082 KRTAP29-1A8MX34 341 aaPredicted RBP11.02□□□□□ -0.65
UPK3A-202ENST00000396082 LINC00173Q6ZV60 143 aa11.02□□□□□ -0.65
UPK3A-202ENST00000396082 TOMM6Q96B49 74 aa11.02□□□□□ -0.65
UPK3A-202ENST00000396082 SMCO4Q9NRQ5 59 aa11.02□□□□□ -0.65
UPK3A-202ENST00000396082 MYCBP2O75592 4640 aa11.02□□□□□ -0.65
UPK3A-202ENST00000396082 A0A0J9YXV3 536 aa11.01□□□□□ -0.65
UPK3A-202ENST00000396082 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.01□□□□□ -0.65
UPK3A-202ENST00000396082 SNAPINO95295 136 aa11.01□□□□□ -0.65
UPK3A-202ENST00000396082 HNRNPA3P51991 378 aaKnown RBP11.01□□□□□ -0.65
UPK3A-202ENST00000396082 RNF151Q2KHN1 245 aa11.01□□□□□ -0.65
UPK3A-202ENST00000396082 FA2HQ7L5A8 372 aa11.01□□□□□ -0.65
UPK3A-202ENST00000396082 SVBPQ8N300 66 aa11.01□□□□□ -0.65
UPK3A-202ENST00000396082 TIMM17AQ99595 171 aa11.01□□□□□ -0.65
UPK3A-202ENST00000396082 MRPL35Q9NZE8 188 aaKnown RBP11.01□□□□□ -0.65
UPK3A-202ENST00000396082 SCGB3A1Q96QR1 104 aa11□□□□□ -0.65
UPK3A-202ENST00000396082 SEC11AP67812 179 aa10.99□□□□□ -0.65
UPK3A-202ENST00000396082 ERASQ7Z444 233 aa10.99□□□□□ -0.65
UPK3A-202ENST00000396082 LINC01549A6NIU2 74 aa10.98□□□□□ -0.65
UPK3A-202ENST00000396082 OXTP01178 125 aa10.98□□□□□ -0.65
UPK3A-202ENST00000396082 UNQ6190/PRO20217Q6UXQ8 127 aa10.98□□□□□ -0.65
UPK3A-202ENST00000396082 LINC01561Q8N1V8 128 aa10.98□□□□□ -0.65
UPK3A-202ENST00000396082 GEMIN7Q9H840 131 aaKnown RBP10.98□□□□□ -0.65
UPK3A-202ENST00000396082 TRAPPC1Q9Y5R8 145 aa10.98□□□□□ -0.65
UPK3A-202ENST00000396082 PRSS2P07478 247 aa10.97□□□□□ -0.65
UPK3A-202ENST00000396082 HERVK_113P63121 156 aa10.97□□□□□ -0.65
UPK3A-202ENST00000396082 C10orf25Q5T742 122 aa10.97□□□□□ -0.65
UPK3A-202ENST00000396082 PACRGQ96M98 296 aaPredicted RBP10.97□□□□□ -0.65
UPK3A-202ENST00000396082 TOMM7Q9P0U1 55 aa10.96□□□□□ -0.65
UPK3A-202ENST00000396082 C6orf48Q9UBA6 75 aa10.96□□□□□ -0.65
UPK3A-202ENST00000396082 LINC01546A6NGU7 62 aa10.95□□□□□ -0.66
UPK3A-202ENST00000396082 PRR3P79522 188 aaKnown RBP10.95□□□□□ -0.66
UPK3A-202ENST00000396082 KIAA0087Q14695 138 aa10.95□□□□□ -0.66
UPK3A-202ENST00000396082 C9orf116Q5BN46 136 aaPredicted RBP10.95□□□□□ -0.66
UPK3A-202ENST00000396082 FAM19A3Q7Z5A8 133 aa10.95□□□□□ -0.66
UPK3A-202ENST00000396082 C2orf82Q6UX34 121 aa10.94□□□□□ -0.66
UPK3A-202ENST00000396082 TRBV30A0A0K0K1B3 111 aa10.93□□□□□ -0.66
UPK3A-202ENST00000396082 A0A1W2PNN7 141 aa10.93□□□□□ -0.66
UPK3A-202ENST00000396082 CKS1BP61024 79 aa10.93□□□□□ -0.66
UPK3A-202ENST00000396082 GAGE2EQ4V326 116 aa10.93□□□□□ -0.66
UPK3A-202ENST00000396082 GAGE2DQ9UEU5 116 aa10.93□□□□□ -0.66
UPK3A-202ENST00000396082 CDKN2A-AS1Q9UH64 79 aa10.93□□□□□ -0.66
UPK3A-202ENST00000396082 TLX1NBP0CAT3 122 aa10.92□□□□□ -0.66
UPK3A-202ENST00000396082 C6orf226Q5I0X4 101 aa10.92□□□□□ -0.66
UPK3A-202ENST00000396082 LINC00469Q8N7U9 141 aa10.92□□□□□ -0.66
UPK3A-202ENST00000396082 PKHD1L1Q86WI1 4243 aa10.92□□□□□ -0.66
UPK3A-202ENST00000396082 Q6ZRP5 223 aa10.91□□□□□ -0.66
UPK3A-202ENST00000396082 Q8IZM0 81 aa10.91□□□□□ -0.66
UPK3A-202ENST00000396082 C18orf32Q8TCD1 76 aa10.91□□□□□ -0.66
UPK3A-202ENST00000396082 PMVKQ15126 192 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms