RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 TSPAN13O95857 204 aa13.78□□□□□ -0.2
CXXC4-201ENST00000394767 SND1-IT1Q9HBX3 110 aa13.78□□□□□ -0.2
CXXC4-201ENST00000394767 SPATA3Q8NHX4 192 aa13.78□□□□□ -0.2
CXXC4-201ENST00000394767 UBE2D4Q9Y2X8 147 aa13.78□□□□□ -0.2
CXXC4-201ENST00000394767 F8WEM9 126 aa13.77□□□□□ -0.2
CXXC4-201ENST00000394767 LOC400499M0QZD8 3231 aa13.77□□□□□ -0.21
CXXC4-201ENST00000394767 CDPF1Q6NVV7 123 aa13.77□□□□□ -0.21
CXXC4-201ENST00000394767 C12orf74Q32Q52 190 aa13.77□□□□□ -0.21
CXXC4-201ENST00000394767 X6R8D5 127 aa13.77□□□□□ -0.21
CXXC4-201ENST00000394767 CEND1Q8N111 149 aa13.76□□□□□ -0.21
CXXC4-201ENST00000394767 ITPR2Q14571 2701 aa13.76□□□□□ -0.21
CXXC4-201ENST00000394767 SPATA12Q7Z6I5 190 aa13.75□□□□□ -0.21
CXXC4-201ENST00000394767 TAL2Q16559 108 aa13.75□□□□□ -0.21
CXXC4-201ENST00000394767 PRO1854Q9UHT4 67 aa13.75□□□□□ -0.21
CXXC4-201ENST00000394767 NBEAQ8NFP9 2946 aa13.75□□□□□ -0.21
CXXC4-201ENST00000394767 MIR7-3HGQ8N6C7 128 aa13.75□□□□□ -0.21
CXXC4-201ENST00000394767 LINC00959A0A1B0GUT2 108 aa13.74□□□□□ -0.21
CXXC4-201ENST00000394767 K7ERU9 68 aa13.74□□□□□ -0.21
CXXC4-201ENST00000394767 PTH2Q96A98 100 aa13.74□□□□□ -0.21
CXXC4-201ENST00000394767 ZNF22P17026 224 aaPredicted RBP13.74□□□□□ -0.21
CXXC4-201ENST00000394767 MUC4Q99102 2169 aa13.74□□□□□ -0.21
CXXC4-201ENST00000394767 KRTAP10-11P60412 298 aa13.74□□□□□ -0.21
CXXC4-201ENST00000394767 CD164L2Q6UWJ8 174 aa13.74□□□□□ -0.21
CXXC4-201ENST00000394767 IFITM1P13164 125 aa13.74□□□□□ -0.21
CXXC4-201ENST00000394767 MUSTN1Q8IVN3 82 aa13.72□□□□□ -0.21
CXXC4-201ENST00000394767 LINC00526Q96FQ7 95 aa13.72□□□□□ -0.21
CXXC4-201ENST00000394767 CDC42SE2Q9NRR3 84 aa13.72□□□□□ -0.21
CXXC4-201ENST00000394767 BVES-AS1Q5T3Y7 98 aa13.71□□□□□ -0.21
CXXC4-201ENST00000394767 ETDCA0A1B0GVM5 59 aa13.71□□□□□ -0.22
CXXC4-201ENST00000394767 LYPD5Q6UWN5 251 aa13.7□□□□□ -0.22
CXXC4-201ENST00000394767 K7EIL1 84 aa13.7□□□□□ -0.22
CXXC4-201ENST00000394767 MRPS36P82909 103 aaKnown RBP13.7□□□□□ -0.22
CXXC4-201ENST00000394767 SNHG12Q9BXW3 62 aa13.7□□□□□ -0.22
CXXC4-201ENST00000394767 SYCNQ0VAF6 134 aa13.69□□□□□ -0.22
CXXC4-201ENST00000394767 UFSP1Q6NVU6 142 aa13.69□□□□□ -0.22
CXXC4-201ENST00000394767 K7ERJ3 54 aa13.69□□□□□ -0.22
CXXC4-201ENST00000394767 CARD19Q96LW7 228 aa13.69□□□□□ -0.22
CXXC4-201ENST00000394767 LINC00694P0DN24 101 aa13.68□□□□□ -0.22
CXXC4-201ENST00000394767 B9D2Q9BPU9 175 aa13.68□□□□□ -0.22
CXXC4-201ENST00000394767 CHCHD7Q9BUK0 85 aa13.68□□□□□ -0.22
CXXC4-201ENST00000394767 NCR3O14931 201 aa13.68□□□□□ -0.22
CXXC4-201ENST00000394767 Q6ZVH6 145 aa13.68□□□□□ -0.22
CXXC4-201ENST00000394767 TMEM126AQ9H061 195 aa13.68□□□□□ -0.22
CXXC4-201ENST00000394767 A4D1N5 150 aa13.68□□□□□ -0.22
CXXC4-201ENST00000394767 WFDC10BQ8IUB3 73 aa13.68□□□□□ -0.22
CXXC4-201ENST00000394767 C2orf82Q6UX34 121 aa13.67□□□□□ -0.22
CXXC4-201ENST00000394767 IGLV4-60A0A075B6I1 120 aa13.67□□□□□ -0.22
CXXC4-201ENST00000394767 Q8NAQ8 132 aa13.66□□□□□ -0.22
CXXC4-201ENST00000394767 KIF25-AS1Q9Y6Z4 181 aa13.66□□□□□ -0.22
CXXC4-201ENST00000394767 POM121L12Q8N7R1 296 aa13.66□□□□□ -0.22
CXXC4-201ENST00000394767 TMEM223A0PJW6 202 aa13.66□□□□□ -0.22
CXXC4-201ENST00000394767 C9JAW5 83 aa13.64□□□□□ -0.23
CXXC4-201ENST00000394767 A8MZ25 164 aa13.64□□□□□ -0.23
CXXC4-201ENST00000394767 TACC2O95359 2948 aa13.64□□□□□ -0.23
CXXC4-201ENST00000394767 UBE2D1P51668 147 aa13.64□□□□□ -0.23
CXXC4-201ENST00000394767 IGIPA6NJ69 53 aa13.64□□□□□ -0.23
CXXC4-201ENST00000394767 NPSP0C0P6 89 aa13.64□□□□□ -0.23
CXXC4-201ENST00000394767 ITPR1Q14643 2758 aa13.63□□□□□ -0.23
CXXC4-201ENST00000394767 XAGE1AQ9HD64 81 aa13.63□□□□□ -0.23
CXXC4-201ENST00000394767 CFC1BP0CG36 223 aa13.63□□□□□ -0.23
CXXC4-201ENST00000394767 CFC1P0CG37 223 aa13.63□□□□□ -0.23
CXXC4-201ENST00000394767 A0A0J9YXY3 114 aa13.62□□□□□ -0.23
CXXC4-201ENST00000394767 MRPL52Q86TS9 123 aaKnown RBP13.61□□□□□ -0.23
CXXC4-201ENST00000394767 C19orf73Q9NVV2 129 aa13.61□□□□□ -0.23
CXXC4-201ENST00000394767 UBE2AP49459 152 aa13.61□□□□□ -0.23
CXXC4-201ENST00000394767 DEFB105AQ8NG35 78 aa13.6□□□□□ -0.23
CXXC4-201ENST00000394767 URB1-AS1Q96HZ7 61 aa13.59□□□□□ -0.23
CXXC4-201ENST00000394767 UTP20O75691 2785 aaKnown RBP13.59□□□□□ -0.23
CXXC4-201ENST00000394767 LINC00242Q5T6M2 205 aa13.59□□□□□ -0.23
CXXC4-201ENST00000394767 SCGB1A1P11684 91 aa13.59□□□□□ -0.23
CXXC4-201ENST00000394767 UBR5O95071 2799 aaPredicted RBP13.58□□□□□ -0.23
CXXC4-201ENST00000394767 LINC00315P59091 139 aa13.58□□□□□ -0.24
CXXC4-201ENST00000394767 HIGD1BQ9P298 99 aa13.58□□□□□ -0.24
CXXC4-201ENST00000394767 TRBV20-1A0A075B6N2 111 aa13.57□□□□□ -0.24
CXXC4-201ENST00000394767 LRBAP50851 2863 aa13.57□□□□□ -0.24
CXXC4-201ENST00000394767 ESRGQ1W209 222 aa13.57□□□□□ -0.24
CXXC4-201ENST00000394767 C9orf118A6NHY6 69 aa13.57□□□□□ -0.24
CXXC4-201ENST00000394767 IBA57-AS1B1ANH7 110 aa13.57□□□□□ -0.24
CXXC4-201ENST00000394767 IGLV4-69A0A075B6H9 119 aa13.56□□□□□ -0.24
CXXC4-201ENST00000394767 CSNK1G2-AS1Q8NCQ2 148 aa13.56□□□□□ -0.24
CXXC4-201ENST00000394767 DLEU1O43261 78 aa13.56□□□□□ -0.24
CXXC4-201ENST00000394767 FXYD2P54710 66 aa13.56□□□□□ -0.24
CXXC4-201ENST00000394767 IGKV2D-26A0A0A0MRZ7 120 aa13.56□□□□□ -0.24
CXXC4-201ENST00000394767 EGFEM1PQ0D2K5 195 aa13.55□□□□□ -0.24
CXXC4-201ENST00000394767 A0A1B0GUV1 79 aa13.55□□□□□ -0.24
CXXC4-201ENST00000394767 Q9UF83 564 aa13.55□□□□□ -0.24
CXXC4-201ENST00000394767 CSDC2Q9Y534 153 aaKnown RBP13.55□□□□□ -0.24
CXXC4-201ENST00000394767 FAM19A5Q7Z5A7 132 aaPredicted RBP13.54□□□□□ -0.24
CXXC4-201ENST00000394767 MUC7Q8TAX7 377 aa13.54□□□□□ -0.24
CXXC4-201ENST00000394767 C1orf134Q5TEV5 83 aa13.54□□□□□ -0.24
CXXC4-201ENST00000394767 LINC00310P59036 64 aa13.53□□□□□ -0.24
CXXC4-201ENST00000394767 MTURNQ8N3F0 131 aa13.53□□□□□ -0.24
CXXC4-201ENST00000394767 A8MTW9 85 aa13.53□□□□□ -0.24
CXXC4-201ENST00000394767 A0A087WZ39 114 aa13.53□□□□□ -0.24
CXXC4-201ENST00000394767 NOTCH1P46531 2555 aa13.53□□□□□ -0.24
CXXC4-201ENST00000394767 CFAP47Q6ZTR5 3102 aa13.53□□□□□ -0.24
CXXC4-201ENST00000394767 CYSRT1A8MQ03 144 aa13.52□□□□□ -0.25
CXXC4-201ENST00000394767 SPANXCQ9NY87 97 aa13.52□□□□□ -0.25
CXXC4-201ENST00000394767 WWC2-AS2Q96NR7 200 aa13.52□□□□□ -0.25
CXXC4-201ENST00000394767 APCP25054 2843 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms