RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 LINC00308Q8TCZ7 52 aa8.71□□□□□ -1.01
RFC5-201ENST00000392542 NOTCH3Q9UM47 2321 aa8.71□□□□□ -1.02
RFC5-201ENST00000392542 TRGV4A0A0C4DH28 118 aa8.71□□□□□ -1.02
RFC5-201ENST00000392542 TRBV10-2A0A0K0K1G8 114 aa8.71□□□□□ -1.02
RFC5-201ENST00000392542 COX6CP09669 75 aa8.71□□□□□ -1.02
RFC5-201ENST00000392542 ZNF625Q96I27 306 aaPredicted RBP8.7□□□□□ -1.02
RFC5-201ENST00000392542 PLA2G2AP14555 144 aa8.7□□□□□ -1.02
RFC5-201ENST00000392542 MTORP42345 2549 aa8.69□□□□□ -1.02
RFC5-201ENST00000392542 FHL2Q14192 279 aa8.69□□□□□ -1.02
RFC5-201ENST00000392542 PRIMA1Q86XR5 153 aa8.69□□□□□ -1.02
RFC5-201ENST00000392542 HERV-K104P63124 156 aa8.69□□□□□ -1.02
RFC5-201ENST00000392542 NTN5Q8WTR8 489 aaPredicted RBP8.69□□□□□ -1.02
RFC5-201ENST00000392542 COPS9Q8WXC6 57 aa8.69□□□□□ -1.02
RFC5-201ENST00000392542 A0A0U1RRA0 63 aa8.68□□□□□ -1.02
RFC5-201ENST00000392542 J3QKU1 62 aa8.68□□□□□ -1.02
RFC5-201ENST00000392542 MEIG1Q5JSS6 88 aa8.68□□□□□ -1.02
RFC5-201ENST00000392542 SOSTDC1Q6X4U4 206 aa8.68□□□□□ -1.02
RFC5-201ENST00000392542 TMEM262E9PQX1 116 aa8.67□□□□□ -1.02
RFC5-201ENST00000392542 LST1O00453 97 aa8.67□□□□□ -1.02
RFC5-201ENST00000392542 GAGE6Q13070 117 aa8.67□□□□□ -1.02
RFC5-201ENST00000392542 CLEC2BQ92478 149 aa8.67□□□□□ -1.02
RFC5-201ENST00000392542 ITPR2Q14571 2701 aa8.67□□□□□ -1.02
RFC5-201ENST00000392542 KRTAP10-3P60369 221 aa8.66□□□□□ -1.02
RFC5-201ENST00000392542 TRBV6-8A0A0A6YYG3 113 aa8.66□□□□□ -1.02
RFC5-201ENST00000392542 H3BT86 120 aa8.66□□□□□ -1.02
RFC5-201ENST00000392542 XGP55808 180 aa8.66□□□□□ -1.02
RFC5-201ENST00000392542 C2CD3Q4AC94 2353 aa8.66□□□□□ -1.02
RFC5-201ENST00000392542 MT-ATP8P03928 68 aa8.65□□□□□ -1.02
RFC5-201ENST00000392542 C2orf82Q6UX34 121 aa8.65□□□□□ -1.02
RFC5-201ENST00000392542 PF4P02776 101 aa8.65□□□□□ -1.02
RFC5-201ENST00000392542 PPDPFQ9H3Y8 114 aa8.65□□□□□ -1.02
RFC5-201ENST00000392542 LINC00482Q8N8I6 264 aa8.64□□□□□ -1.03
RFC5-201ENST00000392542 KIR2DL5BQ8NHK3 375 aa8.64□□□□□ -1.03
RFC5-201ENST00000392542 UBE2WQ96B02 151 aa8.64□□□□□ -1.03
RFC5-201ENST00000392542 IGLV4-60A0A075B6I1 120 aa8.64□□□□□ -1.03
RFC5-201ENST00000392542 COX7B2Q8TF08 81 aa8.64□□□□□ -1.03
RFC5-201ENST00000392542 CHCHD5Q9BSY4 110 aa8.64□□□□□ -1.03
RFC5-201ENST00000392542 LINC00612Q8N6U2 182 aa8.63□□□□□ -1.03
RFC5-201ENST00000392542 SMR3AQ99954 134 aa8.63□□□□□ -1.03
RFC5-201ENST00000392542 TEX49A0A1B0GTD5 131 aa8.63□□□□□ -1.03
RFC5-201ENST00000392542 CRLF1O75462 422 aa8.63□□□□□ -1.03
RFC5-201ENST00000392542 IGKV3OR2-268A0A0C4DH90 116 aa8.62□□□□□ -1.03
RFC5-201ENST00000392542 DEFB130BP0DP73 79 aa8.62□□□□□ -1.03
RFC5-201ENST00000392542 DEFB130AP0DP74 79 aa8.62□□□□□ -1.03
RFC5-201ENST00000392542 UNC79Q9P2D8 2635 aa8.62□□□□□ -1.03
RFC5-201ENST00000392542 COX7A2LO14548 114 aa8.62□□□□□ -1.03
RFC5-201ENST00000392542 SHISA2Q6UWI4 295 aa8.62□□□□□ -1.03
RFC5-201ENST00000392542 IGHV3OR16-9A0A0B4J2B5 98 aa8.61□□□□□ -1.03
RFC5-201ENST00000392542 TOMM7Q9P0U1 55 aa8.61□□□□□ -1.03
RFC5-201ENST00000392542 X6R8D5 127 aa8.6□□□□□ -1.03
RFC5-201ENST00000392542 HIVEP2P31629 2446 aa8.6□□□□□ -1.03
RFC5-201ENST00000392542 TRAV8-4A0A0B4J246 113 aa8.6□□□□□ -1.03
RFC5-201ENST00000392542 A0A087WZ39 114 aa8.59□□□□□ -1.03
RFC5-201ENST00000392542 A0A1B0GV72 72 aa8.59□□□□□ -1.03
RFC5-201ENST00000392542 GYPEP15421 78 aa8.59□□□□□ -1.03
RFC5-201ENST00000392542 HELZ2Q9BYK8 2649 aaKnown RBP8.59□□□□□ -1.03
RFC5-201ENST00000392542 SMIM9A6NGZ8 99 aa8.59□□□□□ -1.03
RFC5-201ENST00000392542 MIR7-3HGQ8N6C7 128 aa8.59□□□□□ -1.03
RFC5-201ENST00000392542 LY6G6DO95868 133 aa8.58□□□□□ -1.04
RFC5-201ENST00000392542 FAM222AQ5U5X8 452 aa8.58□□□□□ -1.04
RFC5-201ENST00000392542 LINC00959A0A1B0GUT2 108 aa8.58□□□□□ -1.04
RFC5-201ENST00000392542 CKS1BP61024 79 aa8.58□□□□□ -1.04
RFC5-201ENST00000392542 DEFB121Q5J5C9 76 aa8.58□□□□□ -1.04
RFC5-201ENST00000392542 KMT2BQ9UMN6 2715 aaPredicted RBP8.57□□□□□ -1.04
RFC5-201ENST00000392542 TRAV13-2A0A0B4J235 113 aa8.57□□□□□ -1.04
RFC5-201ENST00000392542 C5orf38Q86SI9 138 aa8.57□□□□□ -1.04
RFC5-201ENST00000392542 C9orf66Q5T8R8 295 aa8.56□□□□□ -1.04
RFC5-201ENST00000392542 PRO0255Q9UI72 69 aa8.56□□□□□ -1.04
RFC5-201ENST00000392542 CRPP02741 224 aa8.56□□□□□ -1.04
RFC5-201ENST00000392542 LINC00158P58513 81 aa8.56□□□□□ -1.04
RFC5-201ENST00000392542 CITED1Q99966 193 aa8.56□□□□□ -1.04
RFC5-201ENST00000392542 FASNP49327 2511 aaKnown RBP8.56□□□□□ -1.04
RFC5-201ENST00000392542 A0A1B0GUV1 79 aa8.55□□□□□ -1.04
RFC5-201ENST00000392542 IBA57-AS1B1ANH7 110 aa8.55□□□□□ -1.04
RFC5-201ENST00000392542 TRACP01848 142 aa8.55□□□□□ -1.04
RFC5-201ENST00000392542 SND1-IT1Q9HBX3 110 aa8.55□□□□□ -1.04
RFC5-201ENST00000392542 SPATA3Q8NHX4 192 aa8.55□□□□□ -1.04
RFC5-201ENST00000392542 IGKV2-28A0A075B6P5 120 aa8.54□□□□□ -1.04
RFC5-201ENST00000392542 LYRM9A8MSI8 78 aa8.54□□□□□ -1.04
RFC5-201ENST00000392542 IGKV2D-28P01615 120 aa8.54□□□□□ -1.04
RFC5-201ENST00000392542 RPL28P46779 137 aaKnown RBP8.54□□□□□ -1.04
RFC5-201ENST00000392542 LINC00337Q8N6G1 96 aa8.54□□□□□ -1.04
RFC5-201ENST00000392542 SS18Q15532 418 aa8.54□□□□□ -1.04
RFC5-201ENST00000392542 FN1P02751 2386 aaKnown RBP8.54□□□□□ -1.04
RFC5-201ENST00000392542 SNCGO76070 127 aa8.53□□□□□ -1.04
RFC5-201ENST00000392542 CCL18P55774 89 aa8.53□□□□□ -1.04
RFC5-201ENST00000392542 FAM240AA0A1B0GVK7 77 aa8.53□□□□□ -1.04
RFC5-201ENST00000392542 PAX4O43316 350 aa8.53□□□□□ -1.04
RFC5-201ENST00000392542 FAM218AQ96MZ4 157 aa8.53□□□□□ -1.04
RFC5-201ENST00000392542 GCN1Q92616 2671 aaKnown RBP8.52□□□□□ -1.05
RFC5-201ENST00000392542 A0A096LPF7 62 aa8.52□□□□□ -1.05
RFC5-201ENST00000392542 XCL1P47992 114 aa8.52□□□□□ -1.05
RFC5-201ENST00000392542 C15orf53Q8NAA6 179 aa8.52□□□□□ -1.05
RFC5-201ENST00000392542 PFN2P35080 140 aa8.51□□□□□ -1.05
RFC5-201ENST00000392542 DEFB135Q30KP9 77 aa8.51□□□□□ -1.05
RFC5-201ENST00000392542 C6orf226Q5I0X4 101 aa8.51□□□□□ -1.05
RFC5-201ENST00000392542 LINC01561Q8N1V8 128 aa8.51□□□□□ -1.05
RFC5-201ENST00000392542 INAFM1C9JVW0 142 aa8.51□□□□□ -1.05
RFC5-201ENST00000392542 MRPL23Q16540 153 aaKnown RBP8.51□□□□□ -1.05
RFC5-201ENST00000392542 APOC4P55056 127 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms