RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 LYRM7Q5U5X0 104 aa8.51□□□□□ -1.05
SPTBN1-203ENST00000389980 SPINK8P0C7L1 97 aa8.5□□□□□ -1.05
SPTBN1-203ENST00000389980 NANOS2P60321 138 aaKnown RBP8.5□□□□□ -1.05
SPTBN1-203ENST00000389980 PMVKQ15126 192 aa8.5□□□□□ -1.05
SPTBN1-203ENST00000389980 STAB2Q8WWQ8 2551 aa8.5□□□□□ -1.05
SPTBN1-203ENST00000389980 PYGO1Q9Y3Y4 419 aa8.49□□□□□ -1.05
SPTBN1-203ENST00000389980 PRKDCP78527 4128 aaKnown RBP8.49□□□□□ -1.05
SPTBN1-203ENST00000389980 TMEM262E9PQX1 116 aa8.49□□□□□ -1.05
SPTBN1-203ENST00000389980 Q6ZUT4 128 aa8.49□□□□□ -1.05
SPTBN1-203ENST00000389980 SH2D6Q7Z4S9 175 aa8.49□□□□□ -1.05
SPTBN1-203ENST00000389980 IGLV4-69A0A075B6H9 119 aa8.48□□□□□ -1.05
SPTBN1-203ENST00000389980 TRBV6-8A0A0A6YYG3 113 aa8.48□□□□□ -1.05
SPTBN1-203ENST00000389980 GAGE6Q13070 117 aa8.48□□□□□ -1.05
SPTBN1-203ENST00000389980 TMEM243Q9BU79 118 aa8.48□□□□□ -1.05
SPTBN1-203ENST00000389980 CDIP1Q9H305 208 aa8.48□□□□□ -1.05
SPTBN1-203ENST00000389980 MEGF8Q7Z7M0 2845 aa8.48□□□□□ -1.05
SPTBN1-203ENST00000389980 C11orf86A6NJI1 115 aa8.48□□□□□ -1.05
SPTBN1-203ENST00000389980 C11orf45Q8TAV5 145 aa8.48□□□□□ -1.05
SPTBN1-203ENST00000389980 DGAT2L7PQ6IED9 249 aa8.47□□□□□ -1.05
SPTBN1-203ENST00000389980 PGPEP1Q9NXJ5 209 aa8.47□□□□□ -1.05
SPTBN1-203ENST00000389980 K7ERJ3 54 aa8.46□□□□□ -1.05
SPTBN1-203ENST00000389980 UBE2L6O14933 153 aa8.46□□□□□ -1.05
SPTBN1-203ENST00000389980 PPDPFLQ8WWR9 84 aa8.46□□□□□ -1.05
SPTBN1-203ENST00000389980 AMELXQ99217 191 aa8.46□□□□□ -1.05
SPTBN1-203ENST00000389980 CHCHD5Q9BSY4 110 aa8.46□□□□□ -1.06
SPTBN1-203ENST00000389980 A0A0J9YXV3 536 aa8.45□□□□□ -1.06
SPTBN1-203ENST00000389980 M0QXV9 152 aa8.45□□□□□ -1.06
SPTBN1-203ENST00000389980 HIST1H4GQ99525 98 aa8.45□□□□□ -1.06
SPTBN1-203ENST00000389980 TRBV20-1A0A075B6N2 111 aa8.44□□□□□ -1.06
SPTBN1-203ENST00000389980 MRPL23Q16540 153 aaKnown RBP8.44□□□□□ -1.06
SPTBN1-203ENST00000389980 PAPPA-AS1Q5QFB9 102 aa8.44□□□□□ -1.06
SPTBN1-203ENST00000389980 TMEM170BQ5T4T1 132 aa8.44□□□□□ -1.06
SPTBN1-203ENST00000389980 TIMM21Q9BVV7 248 aa8.44□□□□□ -1.06
SPTBN1-203ENST00000389980 ICOSQ9Y6W8 199 aa8.44□□□□□ -1.06
SPTBN1-203ENST00000389980 ZFAND6Q6FIF0 208 aa8.44□□□□□ -1.06
SPTBN1-203ENST00000389980 IGLV4-60A0A075B6I1 120 aa8.43□□□□□ -1.06
SPTBN1-203ENST00000389980 DEFB131BA0A096LNP1 70 aa8.43□□□□□ -1.06
SPTBN1-203ENST00000389980 MRPS36P82909 103 aaKnown RBP8.43□□□□□ -1.06
SPTBN1-203ENST00000389980 TEN1Q86WV5 123 aa8.43□□□□□ -1.06
SPTBN1-203ENST00000389980 CDC42SE2Q9NRR3 84 aa8.43□□□□□ -1.06
SPTBN1-203ENST00000389980 MYMXA0A1B0GTQ4 84 aa8.42□□□□□ -1.06
SPTBN1-203ENST00000389980 ANAPC13Q9BS18 74 aa8.42□□□□□ -1.06
SPTBN1-203ENST00000389980 Q8N3U1 123 aa8.42□□□□□ -1.06
SPTBN1-203ENST00000389980 TMEM101Q96IK0 257 aa8.42□□□□□ -1.06
SPTBN1-203ENST00000389980 CSDC2Q9Y534 153 aaKnown RBP8.42□□□□□ -1.06
SPTBN1-203ENST00000389980 IGHV3-64A0A075B6Q5 118 aa8.41□□□□□ -1.06
SPTBN1-203ENST00000389980 TRAV13-1A0A0B4J241 112 aa8.41□□□□□ -1.06
SPTBN1-203ENST00000389980 Q6Q795 121 aa8.41□□□□□ -1.06
SPTBN1-203ENST00000389980 NFE4Q86UQ8 179 aa8.41□□□□□ -1.06
SPTBN1-203ENST00000389980 PLEKHB2Q96CS7 222 aa8.41□□□□□ -1.06
SPTBN1-203ENST00000389980 B9D2Q9BPU9 175 aa8.41□□□□□ -1.06
SPTBN1-203ENST00000389980 IGKV3OR2-268A0A0C4DH90 116 aa8.41□□□□□ -1.06
SPTBN1-203ENST00000389980 ZNF815PA8K554 130 aa8.41□□□□□ -1.06
SPTBN1-203ENST00000389980 H7C423 109 aa8.41□□□□□ -1.06
SPTBN1-203ENST00000389980 MT-ATP8P03928 68 aa8.41□□□□□ -1.06
SPTBN1-203ENST00000389980 UBE2D1P51668 147 aa8.41□□□□□ -1.06
SPTBN1-203ENST00000389980 ZNF22P17026 224 aaPredicted RBP8.4□□□□□ -1.06
SPTBN1-203ENST00000389980 XGP55808 180 aa8.4□□□□□ -1.06
SPTBN1-203ENST00000389980 TSPEAR-AS2P59090 65 aa8.4□□□□□ -1.06
SPTBN1-203ENST00000389980 SMCPP49901 116 aaPredicted RBP8.39□□□□□ -1.07
SPTBN1-203ENST00000389980 KRTAP21-3Q3LHN1 58 aa8.39□□□□□ -1.07
SPTBN1-203ENST00000389980 HERVK_113P61574 105 aa8.39□□□□□ -1.07
SPTBN1-203ENST00000389980 COX6A2Q02221 97 aa8.39□□□□□ -1.07
SPTBN1-203ENST00000389980 LYPD5Q6UWN5 251 aa8.39□□□□□ -1.07
SPTBN1-203ENST00000389980 SCGB1D4Q6XE38 83 aa8.38□□□□□ -1.07
SPTBN1-203ENST00000389980 TINCRA0A1B0GVN0 87 aa8.38□□□□□ -1.07
SPTBN1-203ENST00000389980 H3BNG1 76 aa8.38□□□□□ -1.07
SPTBN1-203ENST00000389980 LINC00242Q5T6M2 205 aa8.38□□□□□ -1.07
SPTBN1-203ENST00000389980 CLPSL2Q6UWE3 100 aa8.38□□□□□ -1.07
SPTBN1-203ENST00000389980 TRAV10A0A0B4J240 114 aa8.37□□□□□ -1.07
SPTBN1-203ENST00000389980 TMEM223A0PJW6 202 aa8.37□□□□□ -1.07
SPTBN1-203ENST00000389980 LELP1Q5T871 98 aa8.37□□□□□ -1.07
SPTBN1-203ENST00000389980 LINC01600Q96MT4 127 aa8.37□□□□□ -1.07
SPTBN1-203ENST00000389980 CDKN2A-AS1Q9UH64 79 aa8.37□□□□□ -1.07
SPTBN1-203ENST00000389980 CSMD3Q7Z407 3707 aa8.36□□□□□ -1.07
SPTBN1-203ENST00000389980 CARD19Q96LW7 228 aa8.36□□□□□ -1.07
SPTBN1-203ENST00000389980 LYSTQ99698 3801 aa8.36□□□□□ -1.07
SPTBN1-203ENST00000389980 TRAV8-3A0A0A6YYJ7 113 aa8.35□□□□□ -1.07
SPTBN1-203ENST00000389980 A0A1B0GUV1 79 aa8.35□□□□□ -1.07
SPTBN1-203ENST00000389980 ESRGQ1W209 222 aa8.35□□□□□ -1.07
SPTBN1-203ENST00000389980 SS18L2Q9UHA2 77 aa8.35□□□□□ -1.07
SPTBN1-203ENST00000389980 J3QQQ9 107 aa8.35□□□□□ -1.07
SPTBN1-203ENST00000389980 PSMB2P49721 201 aa8.35□□□□□ -1.07
SPTBN1-203ENST00000389980 GAGE2BQ13066 116 aa8.35□□□□□ -1.07
SPTBN1-203ENST00000389980 GAGE2EQ4V326 116 aa8.35□□□□□ -1.07
SPTBN1-203ENST00000389980 SPANXDQ9BXN6 97 aa8.35□□□□□ -1.07
SPTBN1-203ENST00000389980 GAGE2DQ9UEU5 116 aa8.35□□□□□ -1.07
SPTBN1-203ENST00000389980 TENM2Q9NT68 2774 aa8.34□□□□□ -1.07
SPTBN1-203ENST00000389980 SCGB1C2P0DMR2 95 aa8.34□□□□□ -1.07
SPTBN1-203ENST00000389980 LGALS3P17931 250 aaKnown RBP8.34□□□□□ -1.07
SPTBN1-203ENST00000389980 ANGP03950 147 aaKnown RBP8.34□□□□□ -1.08
SPTBN1-203ENST00000389980 TIRAPP58753 221 aa8.34□□□□□ -1.08
SPTBN1-203ENST00000389980 SRSF9Q13242 221 aaKnown RBP eCLIP8.34□□□□□ -1.08
SPTBN1-203ENST00000389980 WFDC10BQ8IUB3 73 aa8.34□□□□□ -1.08
SPTBN1-203ENST00000389980 LINC00269Q8N2A0 174 aa8.34□□□□□ -1.08
SPTBN1-203ENST00000389980 DNAH7Q8WXX0 4024 aa8.33□□□□□ -1.08
SPTBN1-203ENST00000389980 DYNC2H1Q8NCM8 4307 aaKnown RBP8.33□□□□□ -1.08
SPTBN1-203ENST00000389980 HERVK_113P63121 156 aa8.33□□□□□ -1.08
SPTBN1-203ENST00000389980 IGLV5-45A0A087WSX0 123 aa8.32□□□□□ -1.08
SPTBN1-203ENST00000389980 LINC00959A0A1B0GUT2 108 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms