RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 MIFP14174 115 aa10.34□□□□□ -0.75
SHROOM1-203ENST00000378679 HERV-K104P63124 156 aa10.34□□□□□ -0.75
SHROOM1-203ENST00000378679 TM2D2Q9BX73 214 aa10.34□□□□□ -0.75
SHROOM1-203ENST00000378679 LINC01620Q4KN68 170 aa10.33□□□□□ -0.76
SHROOM1-203ENST00000378679 C11orf45Q8TAV5 145 aa10.33□□□□□ -0.76
SHROOM1-203ENST00000378679 GHRHP01286 108 aa10.33□□□□□ -0.76
SHROOM1-203ENST00000378679 C1orf158Q8N1D5 194 aa10.33□□□□□ -0.76
SHROOM1-203ENST00000378679 TSHBP01222 138 aa10.33□□□□□ -0.76
SHROOM1-203ENST00000378679 FSHBP01225 129 aa10.33□□□□□ -0.76
SHROOM1-203ENST00000378679 IGHV4-28A0A0C4DH34 117 aa10.32□□□□□ -0.76
SHROOM1-203ENST00000378679 COX7B2Q8TF08 81 aa10.32□□□□□ -0.76
SHROOM1-203ENST00000378679 FAM236AA0A1B0GUQ0 79 aa10.32□□□□□ -0.76
SHROOM1-203ENST00000378679 FAM236BA0A1B0GV22 79 aa10.32□□□□□ -0.76
SHROOM1-203ENST00000378679 RMI2Q96E14 147 aa10.32□□□□□ -0.76
SHROOM1-203ENST00000378679 LOC100131303A0A0U1RQF7 123 aa10.31□□□□□ -0.76
SHROOM1-203ENST00000378679 TINCRA0A1B0GVN0 87 aa10.31□□□□□ -0.76
SHROOM1-203ENST00000378679 RPL32P62910 135 aaKnown RBP10.31□□□□□ -0.76
SHROOM1-203ENST00000378679 UNC79Q9P2D8 2635 aa10.31□□□□□ -0.76
SHROOM1-203ENST00000378679 KIR2DL5BQ8NHK3 375 aa10.31□□□□□ -0.76
SHROOM1-203ENST00000378679 MUC4Q99102 2169 aa10.3□□□□□ -0.76
SHROOM1-203ENST00000378679 TRBV6-8A0A0A6YYG3 113 aa10.3□□□□□ -0.76
SHROOM1-203ENST00000378679 IGHV4-30-4P0DP06 118 aa10.3□□□□□ -0.76
SHROOM1-203ENST00000378679 ZNF22P17026 224 aaPredicted RBP10.3□□□□□ -0.76
SHROOM1-203ENST00000378679 PRB2P02812 416 aaPredicted RBP10.3□□□□□ -0.76
SHROOM1-203ENST00000378679 TRAV13-2A0A0B4J235 113 aa10.3□□□□□ -0.76
SHROOM1-203ENST00000378679 LINC00269Q8N2A0 174 aa10.3□□□□□ -0.76
SHROOM1-203ENST00000378679 CAMK2N2Q96S95 79 aa10.29□□□□□ -0.76
SHROOM1-203ENST00000378679 SND1-IT1Q9HBX3 110 aa10.29□□□□□ -0.76
SHROOM1-203ENST00000378679 LAMTOR3Q9UHA4 124 aa10.29□□□□□ -0.76
SHROOM1-203ENST00000378679 A0A096LNT2 108 aa10.28□□□□□ -0.76
SHROOM1-203ENST00000378679 PIK3CD-AS1Q5SR53 167 aa10.28□□□□□ -0.76
SHROOM1-203ENST00000378679 DEFB131BA0A096LNP1 70 aa10.28□□□□□ -0.76
SHROOM1-203ENST00000378679 NKAPP1Q8N9T2 125 aa10.27□□□□□ -0.77
SHROOM1-203ENST00000378679 PYGO1Q9Y3Y4 419 aa10.27□□□□□ -0.77
SHROOM1-203ENST00000378679 CUBNO60494 3623 aa10.26□□□□□ -0.77
SHROOM1-203ENST00000378679 A8MZ25 164 aa10.26□□□□□ -0.77
SHROOM1-203ENST00000378679 SPAG11BQ08648 103 aa10.26□□□□□ -0.77
SHROOM1-203ENST00000378679 OVOL2Q9BRP0 275 aa10.26□□□□□ -0.77
SHROOM1-203ENST00000378679 IGKV3D-7A0A0C4DH55 119 aa10.26□□□□□ -0.77
SHROOM1-203ENST00000378679 CRYBG3Q68DQ2 2970 aa10.26□□□□□ -0.77
SHROOM1-203ENST00000378679 KLK9Q2XQG4 91 aa10.26□□□□□ -0.77
SHROOM1-203ENST00000378679 MIR7-3HGQ8N6C7 128 aa10.25□□□□□ -0.77
SHROOM1-203ENST00000378679 NDUFV3P56181 108 aaKnown RBP10.25□□□□□ -0.77
SHROOM1-203ENST00000378679 REG3AQ06141 175 aa10.25□□□□□ -0.77
SHROOM1-203ENST00000378679 SPENQ96T58 3664 aaKnown RBP10.25□□□□□ -0.77
SHROOM1-203ENST00000378679 DCHS2Q6V1P9 2916 aa10.25□□□□□ -0.77
SHROOM1-203ENST00000378679 A0A0J9YXY3 114 aa10.24□□□□□ -0.77
SHROOM1-203ENST00000378679 CCDC179H3BU77 68 aa10.24□□□□□ -0.77
SHROOM1-203ENST00000378679 SPATA25Q9BR10 227 aa10.24□□□□□ -0.77
SHROOM1-203ENST00000378679 IGIPA6NJ69 53 aa10.23□□□□□ -0.77
SHROOM1-203ENST00000378679 TMEM223A0PJW6 202 aa10.23□□□□□ -0.77
SHROOM1-203ENST00000378679 ITPR1Q14643 2758 aa10.23□□□□□ -0.77
SHROOM1-203ENST00000378679 BAALC-AS2P0C853 105 aa10.23□□□□□ -0.77
SHROOM1-203ENST00000378679 NFE4Q86UQ8 179 aa10.23□□□□□ -0.77
SHROOM1-203ENST00000378679 UBE2D3P61077 147 aa10.22□□□□□ -0.77
SHROOM1-203ENST00000378679 UBE2D2P62837 147 aa10.22□□□□□ -0.77
SHROOM1-203ENST00000378679 FHL3Q13643 280 aa10.22□□□□□ -0.77
SHROOM1-203ENST00000378679 UBE2D4Q9Y2X8 147 aa10.22□□□□□ -0.77
SHROOM1-203ENST00000378679 RBMY1FQ15415 496 aaKnown RBP10.22□□□□□ -0.77
SHROOM1-203ENST00000378679 CHCHD10Q8WYQ3 142 aaPredicted RBP10.21□□□□□ -0.77
SHROOM1-203ENST00000378679 GCN1Q92616 2671 aaKnown RBP10.21□□□□□ -0.77
SHROOM1-203ENST00000378679 H7C423 109 aa10.21□□□□□ -0.78
SHROOM1-203ENST00000378679 NDUFA1O15239 70 aa10.21□□□□□ -0.78
SHROOM1-203ENST00000378679 TIRAPP58753 221 aa10.2□□□□□ -0.78
SHROOM1-203ENST00000378679 Q6ZSN1 163 aa10.2□□□□□ -0.78
SHROOM1-203ENST00000378679 STAB1Q9NY15 2570 aa10.2□□□□□ -0.78
SHROOM1-203ENST00000378679 IGLV2-18A0A075B6J9 118 aa10.2□□□□□ -0.78
SHROOM1-203ENST00000378679 KIF25-AS1Q9Y6Z4 181 aa10.2□□□□□ -0.78
SHROOM1-203ENST00000378679 UTP20O75691 2785 aaKnown RBP10.2□□□□□ -0.78
SHROOM1-203ENST00000378679 TEX15Q9BXT5 2789 aa10.19□□□□□ -0.78
SHROOM1-203ENST00000378679 BEAN1Q3B7T3 259 aa10.19□□□□□ -0.78
SHROOM1-203ENST00000378679 KPRPQ5T749 579 aaPredicted RBP10.19□□□□□ -0.78
SHROOM1-203ENST00000378679 FAM19A4Q96LR4 140 aa10.19□□□□□ -0.78
SHROOM1-203ENST00000378679 TRBV10-2A0A0K0K1G8 114 aa10.18□□□□□ -0.78
SHROOM1-203ENST00000378679 TRIAP1O43715 76 aa10.18□□□□□ -0.78
SHROOM1-203ENST00000378679 CXCL5P42830 114 aa10.18□□□□□ -0.78
SHROOM1-203ENST00000378679 RETNQ9HD89 108 aa10.18□□□□□ -0.78
SHROOM1-203ENST00000378679 MIAQ16674 131 aa10.18□□□□□ -0.78
SHROOM1-203ENST00000378679 HIGD2BQ4VC39 106 aa10.18□□□□□ -0.78
SHROOM1-203ENST00000378679 CELSR1Q9NYQ6 3014 aa10.18□□□□□ -0.78
SHROOM1-203ENST00000378679 RPL18AQ02543 176 aaKnown RBP10.17□□□□□ -0.78
SHROOM1-203ENST00000378679 ZANQ9Y493 2812 aa10.17□□□□□ -0.78
SHROOM1-203ENST00000378679 HAMPP81172 84 aa10.17□□□□□ -0.78
SHROOM1-203ENST00000378679 MRPS36P82909 103 aaKnown RBP10.16□□□□□ -0.78
SHROOM1-203ENST00000378679 CDC42SE2Q9NRR3 84 aa10.16□□□□□ -0.78
SHROOM1-203ENST00000378679 INAFM2P0DMQ5 153 aa10.16□□□□□ -0.78
SHROOM1-203ENST00000378679 TMEM126AQ9H061 195 aa10.16□□□□□ -0.78
SHROOM1-203ENST00000378679 SETXQ7Z333 2677 aaKnown RBP10.16□□□□□ -0.78
SHROOM1-203ENST00000378679 COL6A5A8TX70 2615 aa10.15□□□□□ -0.78
SHROOM1-203ENST00000378679 FHL2Q14192 279 aa10.15□□□□□ -0.78
SHROOM1-203ENST00000378679 LINC00315P59091 139 aa10.15□□□□□ -0.79
SHROOM1-203ENST00000378679 C11orf72Q8NBR9 251 aa10.15□□□□□ -0.79
SHROOM1-203ENST00000378679 A0A1B0GX51 115 aa10.14□□□□□ -0.79
SHROOM1-203ENST00000378679 LINC00694P0DN24 101 aa10.14□□□□□ -0.79
SHROOM1-203ENST00000378679 UBE2D1P51668 147 aa10.14□□□□□ -0.79
SHROOM1-203ENST00000378679 A0A0J9YWU9 116 aa10.14□□□□□ -0.79
SHROOM1-203ENST00000378679 NANOS2P60321 138 aaKnown RBP10.14□□□□□ -0.79
SHROOM1-203ENST00000378679 KLK5Q9Y337 293 aaPredicted RBP10.14□□□□□ -0.79
SHROOM1-203ENST00000378679 TSPEAR-AS2P59090 65 aa10.13□□□□□ -0.79
SHROOM1-203ENST00000378679 CHCHD7Q9BUK0 85 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms