RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 IGLV8-61A0A075B6I0 122 aa3.78□□□□□ -1.8
SSX1-201ENST00000376919 TRAV9-1A0A075B6T8 112 aa3.78□□□□□ -1.8
SSX1-201ENST00000376919 I3L3M4 83 aa3.78□□□□□ -1.8
SSX1-201ENST00000376919 K7EP13 123 aa3.78□□□□□ -1.8
SSX1-201ENST00000376919 PPBPP02775 128 aa3.78□□□□□ -1.8
SSX1-201ENST00000376919 CFC1BP0CG36 223 aa3.78□□□□□ -1.8
SSX1-201ENST00000376919 CFC1P0CG37 223 aa3.78□□□□□ -1.8
SSX1-201ENST00000376919 RAB5AP20339 215 aa3.78□□□□□ -1.8
SSX1-201ENST00000376919 TAL2Q16559 108 aa3.78□□□□□ -1.8
SSX1-201ENST00000376919 MRPL51Q4U2R6 128 aaKnown RBP3.78□□□□□ -1.8
SSX1-201ENST00000376919 FAM104BQ5XKR9 115 aa3.78□□□□□ -1.8
SSX1-201ENST00000376919 CLPSL2Q6UWE3 100 aa3.78□□□□□ -1.8
SSX1-201ENST00000376919 NKAPP1Q8N9T2 125 aa3.78□□□□□ -1.8
SSX1-201ENST00000376919 UBE2WQ96B02 151 aa3.78□□□□□ -1.8
SSX1-201ENST00000376919 RMI2Q96E14 147 aa3.78□□□□□ -1.8
SSX1-201ENST00000376919 RNF185Q96GF1 192 aa3.78□□□□□ -1.8
SSX1-201ENST00000376919 TMEM101Q96IK0 257 aa3.78□□□□□ -1.8
SSX1-201ENST00000376919 TMEM242Q9NWH2 141 aa3.78□□□□□ -1.8
SSX1-201ENST00000376919 KLK12Q9UKR0 248 aa3.78□□□□□ -1.8
SSX1-201ENST00000376919 IGKV2D-24A0A075B6R9 120 aa3.77□□□□□ -1.81
SSX1-201ENST00000376919 TRAV8-3A0A0A6YYJ7 113 aa3.77□□□□□ -1.81
SSX1-201ENST00000376919 IGKV3OR2-268A0A0C4DH90 116 aa3.77□□□□□ -1.81
SSX1-201ENST00000376919 A0A1B0GXF2 115 aa3.77□□□□□ -1.81
SSX1-201ENST00000376919 HLA-DQA1P01909 254 aa3.77□□□□□ -1.81
SSX1-201ENST00000376919 RPS10P46783 165 aaKnown RBP3.77□□□□□ -1.81
SSX1-201ENST00000376919 SMAGPQ0VAQ4 97 aa3.77□□□□□ -1.81
SSX1-201ENST00000376919 COX19Q49B96 90 aa3.77□□□□□ -1.81
SSX1-201ENST00000376919 MPV17L2Q567V2 206 aa3.77□□□□□ -1.81
SSX1-201ENST00000376919 Q6ZR54 194 aa3.77□□□□□ -1.81
SSX1-201ENST00000376919 TMEM136Q6ZRR5 245 aa3.77□□□□□ -1.81
SSX1-201ENST00000376919 NIT1Q86X76 327 aa3.77□□□□□ -1.81
SSX1-201ENST00000376919 SLC7A5P1Q8MH63 180 aa3.77□□□□□ -1.81
SSX1-201ENST00000376919 PRELID3AQ96N28 172 aa3.77□□□□□ -1.81
SSX1-201ENST00000376919 TMEM70Q9BUB7 260 aa3.77□□□□□ -1.81
SSX1-201ENST00000376919 CHCHD7Q9BUK0 85 aa3.77□□□□□ -1.81
SSX1-201ENST00000376919 KRTAP1-5Q9BYS1 174 aa3.77□□□□□ -1.81
SSX1-201ENST00000376919 MAP1LC3AQ9H492 121 aa3.77□□□□□ -1.81
SSX1-201ENST00000376919 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.76□□□□□ -1.81
SSX1-201ENST00000376919 TRBV6-5A0A0K0K1A5 114 aa3.76□□□□□ -1.81
SSX1-201ENST00000376919 LOC389332A0A1B0GUA5 103 aa3.76□□□□□ -1.81
SSX1-201ENST00000376919 IGKV2-29A2NJV5 120 aaPredicted RBP3.76□□□□□ -1.81
SSX1-201ENST00000376919 TCAPO15273 167 aa3.76□□□□□ -1.81
SSX1-201ENST00000376919 NPYP01303 97 aa3.76□□□□□ -1.81
SSX1-201ENST00000376919 MT-ND6P03923 174 aa3.76□□□□□ -1.81
SSX1-201ENST00000376919 Q0VG73 95 aa3.76□□□□□ -1.81
SSX1-201ENST00000376919 IQCJQ1A5X6 159 aa3.76□□□□□ -1.81
SSX1-201ENST00000376919 C10orf91Q5T1B1 145 aa3.76□□□□□ -1.81
SSX1-201ENST00000376919 NTM-AS1Q6ZSK4 140 aa3.76□□□□□ -1.81
SSX1-201ENST00000376919 Q8N976 141 aa3.76□□□□□ -1.81
SSX1-201ENST00000376919 C20orf78Q9BR46 151 aa3.76□□□□□ -1.81
SSX1-201ENST00000376919 SMIM2Q9BVW6 85 aa3.76□□□□□ -1.81
SSX1-201ENST00000376919 TGIF2-C20orf24A0A0A6YYL0 155 aa3.75□□□□□ -1.81
SSX1-201ENST00000376919 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
SSX1-201ENST00000376919 IBA57-AS1B1ANH7 110 aa3.75□□□□□ -1.81
SSX1-201ENST00000376919 PHOX2AO14813 284 aa3.75□□□□□ -1.81
SSX1-201ENST00000376919 GAS8-AS1O95177 125 aa3.75□□□□□ -1.81
SSX1-201ENST00000376919 RBX1P62877 108 aa3.75□□□□□ -1.81
SSX1-201ENST00000376919 CTAG1AP78358 180 aa3.75□□□□□ -1.81
SSX1-201ENST00000376919 FABP9Q0Z7S8 132 aa3.75□□□□□ -1.81
SSX1-201ENST00000376919 MRPL55Q7Z7F7 128 aaKnown RBP3.75□□□□□ -1.81
SSX1-201ENST00000376919 LINC00269Q8N2A0 174 aa3.75□□□□□ -1.81
SSX1-201ENST00000376919 OR5A1Q8NGJ0 315 aa3.75□□□□□ -1.81
SSX1-201ENST00000376919 SMCO4Q9NRQ5 59 aa3.75□□□□□ -1.81
SSX1-201ENST00000376919 LAMTOR2Q9Y2Q5 125 aa3.75□□□□□ -1.81
SSX1-201ENST00000376919 TRAPPC1Q9Y5R8 145 aa3.75□□□□□ -1.81
SSX1-201ENST00000376919 DNAH6Q9C0G6 4158 aa3.75□□□□□ -1.81
SSX1-201ENST00000376919 DNAH10Q8IVF4 4471 aa3.74□□□□□ -1.81
SSX1-201ENST00000376919 IGLV10-54A0A075B6I4 117 aa3.74□□□□□ -1.81
SSX1-201ENST00000376919 TRBV27A0A0K0K1C4 114 aa3.74□□□□□ -1.81
SSX1-201ENST00000376919 H7C423 109 aa3.74□□□□□ -1.81
SSX1-201ENST00000376919 RTL8CO15255 209 aa3.74□□□□□ -1.81
SSX1-201ENST00000376919 FGF6P10767 208 aa3.74□□□□□ -1.81
SSX1-201ENST00000376919 ZNF25P17030 456 aaPredicted RBP3.74□□□□□ -1.81
SSX1-201ENST00000376919 REG3AQ06141 175 aa3.74□□□□□ -1.81
SSX1-201ENST00000376919 KIAA0087Q14695 138 aa3.74□□□□□ -1.81
SSX1-201ENST00000376919 MIAQ16674 131 aa3.74□□□□□ -1.81
SSX1-201ENST00000376919 GNB1LQ9BYB4 327 aa3.74□□□□□ -1.81
SSX1-201ENST00000376919 CBY1Q9Y3M2 126 aa3.74□□□□□ -1.81
SSX1-201ENST00000376919 TRBV24-1A0A075B6N3 115 aa3.73□□□□□ -1.81
SSX1-201ENST00000376919 LECT2O14960 151 aa3.73□□□□□ -1.81
SSX1-201ENST00000376919 SERF1AO75920 110 aa3.73□□□□□ -1.81
SSX1-201ENST00000376919 IFI27P40305 119 aaPredicted RBP3.73□□□□□ -1.81
SSX1-201ENST00000376919 POLR2KP53803 58 aaKnown RBP3.73□□□□□ -1.81
SSX1-201ENST00000376919 ORMDL2Q53FV1 153 aa3.73□□□□□ -1.81
SSX1-201ENST00000376919 FA2HQ7L5A8 372 aa3.73□□□□□ -1.81
SSX1-201ENST00000376919 NXT2Q9NPJ8 142 aaKnown RBP3.73□□□□□ -1.81
SSX1-201ENST00000376919 DNAH2Q9P225 4427 aa3.73□□□□□ -1.81
SSX1-201ENST00000376919 FRAS1Q86XX4 4008 aa3.72□□□□□ -1.81
SSX1-201ENST00000376919 IGLV4-60A0A075B6I1 120 aa3.72□□□□□ -1.81
SSX1-201ENST00000376919 TRAV8-4A0A0B4J246 113 aa3.72□□□□□ -1.81
SSX1-201ENST00000376919 C16orf90A8MZG2 172 aa3.72□□□□□ -1.81
SSX1-201ENST00000376919 G0S2P27469 103 aa3.72□□□□□ -1.81
SSX1-201ENST00000376919 PFN2P35080 140 aa3.72□□□□□ -1.81
SSX1-201ENST00000376919 RPL18AQ02543 176 aaKnown RBP3.72□□□□□ -1.81
SSX1-201ENST00000376919 SS18Q15532 418 aa3.72□□□□□ -1.81
SSX1-201ENST00000376919 SPATA12Q7Z6I5 190 aa3.72□□□□□ -1.81
SSX1-201ENST00000376919 BOD1L2Q8IYS8 172 aa3.72□□□□□ -1.81
SSX1-201ENST00000376919 Q8N8P6 123 aa3.72□□□□□ -1.81
SSX1-201ENST00000376919 CYSLTR1Q9Y271 337 aa3.72□□□□□ -1.81
SSX1-201ENST00000376919 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms