RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 NAT8Q9UHE5 227 aa10.68□□□□□ -0.7
HLA-A-201ENST00000376802 APOC3P02656 99 aa10.67□□□□□ -0.7
HLA-A-201ENST00000376802 MRPL51Q4U2R6 128 aaKnown RBP10.67□□□□□ -0.7
HLA-A-201ENST00000376802 KIR2DL4Q99706 377 aa10.67□□□□□ -0.7
HLA-A-201ENST00000376802 OPRPNQ99935 248 aaPredicted RBP10.67□□□□□ -0.7
HLA-A-201ENST00000376802 SMAGPQ0VAQ4 97 aa10.66□□□□□ -0.7
HLA-A-201ENST00000376802 TMEM241Q24JQ0 296 aa10.66□□□□□ -0.7
HLA-A-201ENST00000376802 FAM104BQ5XKR9 115 aa10.66□□□□□ -0.7
HLA-A-201ENST00000376802 SNAPINO95295 136 aa10.65□□□□□ -0.7
HLA-A-201ENST00000376802 RPL18AQ02543 176 aaKnown RBP10.65□□□□□ -0.7
HLA-A-201ENST00000376802 PHF5AQ7RTV0 110 aaKnown RBP10.65□□□□□ -0.7
HLA-A-201ENST00000376802 TRBV24-1A0A075B6N3 115 aa10.64□□□□□ -0.71
HLA-A-201ENST00000376802 PPP1R2P9O14990 202 aa10.64□□□□□ -0.71
HLA-A-201ENST00000376802 MT-ND6P03923 174 aa10.64□□□□□ -0.71
HLA-A-201ENST00000376802 SPAG11BQ08648 103 aa10.64□□□□□ -0.71
HLA-A-201ENST00000376802 RNF151Q2KHN1 245 aa10.64□□□□□ -0.71
HLA-A-201ENST00000376802 NAT8BQ9UHF3 227 aa10.64□□□□□ -0.71
HLA-A-201ENST00000376802 RPL39P62891 51 aaKnown RBP10.63□□□□□ -0.71
HLA-A-201ENST00000376802 RHEBQ15382 184 aa10.63□□□□□ -0.71
HLA-A-201ENST00000376802 OR10D4PQ8NGN7 298 aa10.63□□□□□ -0.71
HLA-A-201ENST00000376802 C20orf78Q9BR46 151 aa10.63□□□□□ -0.71
HLA-A-201ENST00000376802 IGHV3OR16-9A0A0B4J2B5 98 aa10.62□□□□□ -0.71
HLA-A-201ENST00000376802 SMIM27A0A1W2PRY6 76 aa10.62□□□□□ -0.71
HLA-A-201ENST00000376802 RPL23P62829 140 aaKnown RBP10.62□□□□□ -0.71
HLA-A-201ENST00000376802 RPL32P62910 135 aaKnown RBP10.62□□□□□ -0.71
HLA-A-201ENST00000376802 C1orf137Q5JT78 98 aa10.62□□□□□ -0.71
HLA-A-201ENST00000376802 KRTAP11-1Q8IUC1 163 aa10.62□□□□□ -0.71
HLA-A-201ENST00000376802 TMEM18Q96B42 140 aa10.62□□□□□ -0.71
HLA-A-201ENST00000376802 C10orf25Q5T742 122 aa10.61□□□□□ -0.71
HLA-A-201ENST00000376802 MRPL35Q9NZE8 188 aaKnown RBP10.61□□□□□ -0.71
HLA-A-201ENST00000376802 FAM168BA1KXE4 195 aa10.6□□□□□ -0.71
HLA-A-201ENST00000376802 ORAOV1Q8WV07 137 aa10.6□□□□□ -0.71
HLA-A-201ENST00000376802 LPAP08519 4548 aa10.6□□□□□ -0.71
HLA-A-201ENST00000376802 TNFRSF6BO95407 300 aa10.59□□□□□ -0.71
HLA-A-201ENST00000376802 CKS2P33552 79 aa10.59□□□□□ -0.71
HLA-A-201ENST00000376802 ADIRFQ15847 76 aa10.59□□□□□ -0.71
HLA-A-201ENST00000376802 F8WDY8 70 aa10.58□□□□□ -0.71
HLA-A-201ENST00000376802 IGLV7-43P04211 117 aa10.58□□□□□ -0.71
HLA-A-201ENST00000376802 MRPS36P82909 103 aaKnown RBP10.58□□□□□ -0.71
HLA-A-201ENST00000376802 UNQ6190/PRO20217Q6UXQ8 127 aa10.58□□□□□ -0.71
HLA-A-201ENST00000376802 IMMP2LQ96T52 175 aa10.58□□□□□ -0.71
HLA-A-201ENST00000376802 SMIM2Q9BVW6 85 aa10.58□□□□□ -0.71
HLA-A-201ENST00000376802 TCAPO15273 167 aa10.58□□□□□ -0.72
HLA-A-201ENST00000376802 KRTAP7-1Q8IUC3 87 aa10.58□□□□□ -0.72
HLA-A-201ENST00000376802 PRR26Q8N8Z3 221 aa10.58□□□□□ -0.72
HLA-A-201ENST00000376802 CTDSP1Q9GZU7 261 aa10.58□□□□□ -0.72
HLA-A-201ENST00000376802 SPANXA1Q9NS26 97 aa10.58□□□□□ -0.72
HLA-A-201ENST00000376802 C6orf48Q9UBA6 75 aa10.58□□□□□ -0.72
HLA-A-201ENST00000376802 A0A1B0GW15 77 aa10.57□□□□□ -0.72
HLA-A-201ENST00000376802 D6R8Y8 96 aa10.57□□□□□ -0.72
HLA-A-201ENST00000376802 NDUFA1O15239 70 aa10.57□□□□□ -0.72
HLA-A-201ENST00000376802 MT-ND4LP03901 98 aa10.57□□□□□ -0.72
HLA-A-201ENST00000376802 TLX1NBP0CAT3 122 aa10.57□□□□□ -0.72
HLA-A-201ENST00000376802 DIRC1Q969H9 104 aa10.57□□□□□ -0.72
HLA-A-201ENST00000376802 ANAPC16Q96DE5 110 aa10.57□□□□□ -0.72
HLA-A-201ENST00000376802 A0A087WZ39 114 aa10.56□□□□□ -0.72
HLA-A-201ENST00000376802 NPYP01303 97 aa10.56□□□□□ -0.72
HLA-A-201ENST00000376802 KIAA0087Q14695 138 aa10.56□□□□□ -0.72
HLA-A-201ENST00000376802 HBBP68871 147 aa10.55□□□□□ -0.72
HLA-A-201ENST00000376802 RPS10P5Q9NQ39 176 aa10.55□□□□□ -0.72
HLA-A-201ENST00000376802 A0A1B0GXF2 115 aa10.54□□□□□ -0.72
HLA-A-201ENST00000376802 IFITM10A6NMD0 228 aa10.54□□□□□ -0.72
HLA-A-201ENST00000376802 H0Y9J4 135 aa10.54□□□□□ -0.72
HLA-A-201ENST00000376802 MRPL54Q6P161 138 aaKnown RBP10.54□□□□□ -0.72
HLA-A-201ENST00000376802 FAM19A5Q7Z5A7 132 aaPredicted RBP10.53□□□□□ -0.72
HLA-A-201ENST00000376802 SMCO4Q9NRQ5 59 aa10.53□□□□□ -0.72
HLA-A-201ENST00000376802 KRTAP1-4P0C5Y4 121 aa10.52□□□□□ -0.73
HLA-A-201ENST00000376802 GAGE2EQ4V326 116 aa10.52□□□□□ -0.73
HLA-A-201ENST00000376802 GAGE2DQ9UEU5 116 aa10.52□□□□□ -0.73
HLA-A-201ENST00000376802 PPBPP02775 128 aa10.51□□□□□ -0.73
HLA-A-201ENST00000376802 LINC00242Q5T6M2 205 aa10.51□□□□□ -0.73
HLA-A-201ENST00000376802 TGIF2-C20orf24A0A0A6YYL0 155 aa10.5□□□□□ -0.73
HLA-A-201ENST00000376802 SCO1O75880 301 aa10.5□□□□□ -0.73
HLA-A-201ENST00000376802 PYGO1Q9Y3Y4 419 aa10.5□□□□□ -0.73
HLA-A-201ENST00000376802 IGLV4-3A0A075B6K6 122 aa10.49□□□□□ -0.73
HLA-A-201ENST00000376802 S100A8P05109 93 aa10.49□□□□□ -0.73
HLA-A-201ENST00000376802 C2orf82Q6UX34 121 aa10.49□□□□□ -0.73
HLA-A-201ENST00000376802 IGLV1-50A0A075B6I6 118 aa10.48□□□□□ -0.73
HLA-A-201ENST00000376802 M0QXV9 152 aa10.48□□□□□ -0.73
HLA-A-201ENST00000376802 IFI27P40305 119 aaPredicted RBP10.48□□□□□ -0.73
HLA-A-201ENST00000376802 C9orf129Q5T035 196 aaKnown RBP10.48□□□□□ -0.73
HLA-A-201ENST00000376802 CBLN2Q8IUK8 224 aa10.48□□□□□ -0.73
HLA-A-201ENST00000376802 TRBV30A0A0K0K1B3 111 aa10.47□□□□□ -0.73
HLA-A-201ENST00000376802 RAB5AP20339 215 aa10.47□□□□□ -0.73
HLA-A-201ENST00000376802 TMEM136Q6ZRR5 245 aa10.47□□□□□ -0.73
HLA-A-201ENST00000376802 ORMDL3Q8N138 153 aa10.47□□□□□ -0.73
HLA-A-201ENST00000376802 PRELID3AQ96N28 172 aa10.47□□□□□ -0.73
HLA-A-201ENST00000376802 YPEL4Q96NS1 127 aa10.47□□□□□ -0.73
HLA-A-201ENST00000376802 TRAV9-1A0A075B6T8 112 aa10.46□□□□□ -0.73
HLA-A-201ENST00000376802 PRSS47A8MTI9 375 aa10.46□□□□□ -0.73
HLA-A-201ENST00000376802 NDUFC2-KCTD14E9PQ53 114 aa10.46□□□□□ -0.73
HLA-A-201ENST00000376802 S100PP25815 95 aa10.46□□□□□ -0.73
HLA-A-201ENST00000376802 TMEM141Q96I45 108 aa10.46□□□□□ -0.73
HLA-A-201ENST00000376802 UBE2D1P51668 147 aa10.45□□□□□ -0.74
HLA-A-201ENST00000376802 UBE2BP63146 152 aa10.44□□□□□ -0.74
HLA-A-201ENST00000376802 ZC2HC1BQ5TFG8 222 aa10.44□□□□□ -0.74
HLA-A-201ENST00000376802 LINC00173Q6ZV60 143 aa10.44□□□□□ -0.74
HLA-A-201ENST00000376802 ATP5L2Q7Z4Y8 100 aa10.43□□□□□ -0.74
HLA-A-201ENST00000376802 LINC01561Q8N1V8 128 aa10.43□□□□□ -0.74
HLA-A-201ENST00000376802 TEX43Q6ZNM6 134 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms