RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 ENHOQ6UWT2 76 aa8.52□□□□□ -1.05
CLCN6-205ENST00000376492 Q8N976 141 aa8.52□□□□□ -1.05
CLCN6-205ENST00000376492 TMEM243Q9BU79 118 aa8.52□□□□□ -1.05
CLCN6-205ENST00000376492 CYSLTR1Q9Y271 337 aa8.52□□□□□ -1.05
CLCN6-205ENST00000376492 IGKV2D-24A0A075B6R9 120 aa8.51□□□□□ -1.05
CLCN6-205ENST00000376492 A0A096LNJ9 63 aa8.51□□□□□ -1.05
CLCN6-205ENST00000376492 IFITM10A6NMD0 228 aa8.51□□□□□ -1.05
CLCN6-205ENST00000376492 ANGP03950 147 aaKnown RBP8.51□□□□□ -1.05
CLCN6-205ENST00000376492 PAPPA-AS1Q5QFB9 102 aa8.51□□□□□ -1.05
CLCN6-205ENST00000376492 ERASQ7Z444 233 aa8.51□□□□□ -1.05
CLCN6-205ENST00000376492 C20orf203Q8NBC4 194 aa8.51□□□□□ -1.05
CLCN6-205ENST00000376492 TMEM141Q96I45 108 aa8.51□□□□□ -1.05
CLCN6-205ENST00000376492 TIMM17AQ99595 171 aa8.51□□□□□ -1.05
CLCN6-205ENST00000376492 TIMM21Q9BVV7 248 aa8.51□□□□□ -1.05
CLCN6-205ENST00000376492 PRR34Q9NV39 138 aa8.51□□□□□ -1.05
CLCN6-205ENST00000376492 CSDC2Q9Y534 153 aaKnown RBP8.51□□□□□ -1.05
CLCN6-205ENST00000376492 LOC105371267A0A1B0GV96 52 aa8.5□□□□□ -1.05
CLCN6-205ENST00000376492 MT1HL1P0DM35 61 aa8.5□□□□□ -1.05
CLCN6-205ENST00000376492 FABP4P15090 132 aa8.5□□□□□ -1.05
CLCN6-205ENST00000376492 C2orf66Q6UXQ4 117 aa8.5□□□□□ -1.05
CLCN6-205ENST00000376492 LRP2P98164 4655 aa8.5□□□□□ -1.05
CLCN6-205ENST00000376492 CRPP02741 224 aa8.49□□□□□ -1.05
CLCN6-205ENST00000376492 MIAQ16674 131 aa8.49□□□□□ -1.05
CLCN6-205ENST00000376492 MRPL52Q86TS9 123 aaKnown RBP8.49□□□□□ -1.05
CLCN6-205ENST00000376492 SPANXA1Q9NS26 97 aa8.49□□□□□ -1.05
CLCN6-205ENST00000376492 UBE2L6O14933 153 aa8.48□□□□□ -1.05
CLCN6-205ENST00000376492 ZNF25P17030 456 aaPredicted RBP8.48□□□□□ -1.05
CLCN6-205ENST00000376492 LINC00269Q8N2A0 174 aa8.48□□□□□ -1.05
CLCN6-205ENST00000376492 FAM19A2Q8N3H0 131 aa8.48□□□□□ -1.05
CLCN6-205ENST00000376492 C1orf43Q9BWL3 253 aa8.48□□□□□ -1.05
CLCN6-205ENST00000376492 MAP1LC3CQ9BXW4 147 aa8.48□□□□□ -1.05
CLCN6-205ENST00000376492 IGLV4-60A0A075B6I1 120 aa8.47□□□□□ -1.05
CLCN6-205ENST00000376492 IGIPA6NJ69 53 aa8.47□□□□□ -1.05
CLCN6-205ENST00000376492 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.47□□□□□ -1.05
CLCN6-205ENST00000376492 PET117Q6UWS5 81 aa8.47□□□□□ -1.05
CLCN6-205ENST00000376492 TRAV12-1A0A0B4J245 112 aa8.46□□□□□ -1.06
CLCN6-205ENST00000376492 MRPS36P82909 103 aaKnown RBP8.46□□□□□ -1.06
CLCN6-205ENST00000376492 REG3AQ06141 175 aa8.46□□□□□ -1.06
CLCN6-205ENST00000376492 IFI27L1Q96BM0 104 aa8.46□□□□□ -1.06
CLCN6-205ENST00000376492 TRAV8-4A0A0B4J246 113 aa8.45□□□□□ -1.06
CLCN6-205ENST00000376492 JOSD1Q15040 202 aaPredicted RBP8.45□□□□□ -1.06
CLCN6-205ENST00000376492 KRTAP26-1Q6PEX3 210 aa8.45□□□□□ -1.06
CLCN6-205ENST00000376492 OR10D4PQ8NGN7 298 aa8.45□□□□□ -1.06
CLCN6-205ENST00000376492 SCGB3A1Q96QR1 104 aa8.45□□□□□ -1.06
CLCN6-205ENST00000376492 TNXBP22105 4242 aa8.44□□□□□ -1.06
CLCN6-205ENST00000376492 C20orf202A1L168 122 aa8.44□□□□□ -1.06
CLCN6-205ENST00000376492 SYS1-DBNDD2H3BUS1 97 aa8.44□□□□□ -1.06
CLCN6-205ENST00000376492 PMCHL1Q16048 86 aa8.44□□□□□ -1.06
CLCN6-205ENST00000376492 CLPSL2Q6UWE3 100 aa8.44□□□□□ -1.06
CLCN6-205ENST00000376492 Q6ZN92 141 aa8.44□□□□□ -1.06
CLCN6-205ENST00000376492 UBE2D4Q9Y2X8 147 aa8.44□□□□□ -1.06
CLCN6-205ENST00000376492 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.43□□□□□ -1.06
CLCN6-205ENST00000376492 IGKV2-29A2NJV5 120 aaPredicted RBP8.43□□□□□ -1.06
CLCN6-205ENST00000376492 PANO1I0J062 215 aa8.43□□□□□ -1.06
CLCN6-205ENST00000376492 C3orf79P0CE67 100 aa8.43□□□□□ -1.06
CLCN6-205ENST00000376492 SMIM6P0DI80 62 aa8.43□□□□□ -1.06
CLCN6-205ENST00000376492 FGF6P10767 208 aa8.43□□□□□ -1.06
CLCN6-205ENST00000376492 AMMECR1LQ6DCA0 310 aa8.43□□□□□ -1.06
CLCN6-205ENST00000376492 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.43□□□□□ -1.06
CLCN6-205ENST00000376492 CCL25O15444 150 aa8.42□□□□□ -1.06
CLCN6-205ENST00000376492 LINC01545Q5VT33 79 aa8.42□□□□□ -1.06
CLCN6-205ENST00000376492 USP17L23D6RBM5 183 aa8.41□□□□□ -1.06
CLCN6-205ENST00000376492 PMVKQ15126 192 aa8.41□□□□□ -1.06
CLCN6-205ENST00000376492 C14orf177Q52M58 125 aa8.41□□□□□ -1.06
CLCN6-205ENST00000376492 TMEM101Q96IK0 257 aa8.41□□□□□ -1.06
CLCN6-205ENST00000376492 AMELXQ99217 191 aa8.41□□□□□ -1.06
CLCN6-205ENST00000376492 IGLV10-54A0A075B6I4 117 aa8.4□□□□□ -1.06
CLCN6-205ENST00000376492 PRSS1P07477 247 aa8.4□□□□□ -1.06
CLCN6-205ENST00000376492 KRTDAPP60985 99 aa8.4□□□□□ -1.06
CLCN6-205ENST00000376492 RPL39P62891 51 aaKnown RBP8.4□□□□□ -1.06
CLCN6-205ENST00000376492 DGAT2L7PQ6IED9 249 aa8.4□□□□□ -1.06
CLCN6-205ENST00000376492 FAM19A3Q7Z5A8 133 aa8.4□□□□□ -1.06
CLCN6-205ENST00000376492 VCX2Q9H322 139 aa8.4□□□□□ -1.06
CLCN6-205ENST00000376492 IGLV4-3A0A075B6K6 122 aa8.39□□□□□ -1.07
CLCN6-205ENST00000376492 SEC11AP67812 179 aa8.39□□□□□ -1.07
CLCN6-205ENST00000376492 TEX43Q6ZNM6 134 aa8.39□□□□□ -1.07
CLCN6-205ENST00000376492 CDC42SE2Q9NRR3 84 aa8.39□□□□□ -1.07
CLCN6-205ENST00000376492 F8VRH5 84 aa8.38□□□□□ -1.07
CLCN6-205ENST00000376492 PLNP26678 52 aa8.38□□□□□ -1.07
CLCN6-205ENST00000376492 PYY3Q5JQD4 70 aa8.38□□□□□ -1.07
CLCN6-205ENST00000376492 Q6ZRU5 148 aa8.38□□□□□ -1.07
CLCN6-205ENST00000376492 ZNF664Q8N3J9 261 aa8.38□□□□□ -1.07
CLCN6-205ENST00000376492 OR5A1Q8NGJ0 315 aa8.38□□□□□ -1.07
CLCN6-205ENST00000376492 C2orf88Q9BSF0 95 aa8.38□□□□□ -1.07
CLCN6-205ENST00000376492 CST9LQ9H4G1 147 aa8.38□□□□□ -1.07
CLCN6-205ENST00000376492 ODF1Q14990 250 aa8.37□□□□□ -1.07
CLCN6-205ENST00000376492 LINC00173Q6ZV60 143 aa8.37□□□□□ -1.07
CLCN6-205ENST00000376492 C9orf163Q8N9P6 203 aa8.37□□□□□ -1.07
CLCN6-205ENST00000376492 FAM104AQ969W3 186 aa8.37□□□□□ -1.07
CLCN6-205ENST00000376492 IGKV3OR2-268A0A0C4DH90 116 aa8.36□□□□□ -1.07
CLCN6-205ENST00000376492 SCGB1D1O95968 90 aa8.36□□□□□ -1.07
CLCN6-205ENST00000376492 CHCHD10Q8WYQ3 142 aaPredicted RBP8.36□□□□□ -1.07
CLCN6-205ENST00000376492 LINC00959A0A1B0GUT2 108 aa8.35□□□□□ -1.07
CLCN6-205ENST00000376492 GAGE12HA6NDE8 117 aa8.35□□□□□ -1.07
CLCN6-205ENST00000376492 SDIM1Q6ZPB5 146 aa8.35□□□□□ -1.07
CLCN6-205ENST00000376492 CHTOPQ9Y3Y2 248 aaKnown RBP8.35□□□□□ -1.07
CLCN6-205ENST00000376492 DPM2O94777 84 aa8.34□□□□□ -1.07
CLCN6-205ENST00000376492 IGLC3P0DOY3 106 aa8.34□□□□□ -1.07
CLCN6-205ENST00000376492 TINCRA0A1B0GVN0 87 aa8.33□□□□□ -1.08
CLCN6-205ENST00000376492 IGKCP01834 107 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 270.3 ms