RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 FAM30AQ9NZY2 134 aa12.43□□□□□ -0.42
MCF2L-203ENST00000375604 CREBBPQ92793 2442 aa12.43□□□□□ -0.42
MCF2L-203ENST00000375604 LOC107984640A0A0U1RRK4 108 aa12.43□□□□□ -0.42
MCF2L-203ENST00000375604 Q6ZTC4 211 aa12.43□□□□□ -0.42
MCF2L-203ENST00000375604 WNK1Q9H4A3 2382 aa12.43□□□□□ -0.42
MCF2L-203ENST00000375604 CYSRT1A8MQ03 144 aa12.43□□□□□ -0.42
MCF2L-203ENST00000375604 LINC00643Q86TS7 51 aa12.42□□□□□ -0.42
MCF2L-203ENST00000375604 KIR2DL5BQ8NHK3 375 aa12.42□□□□□ -0.42
MCF2L-203ENST00000375604 UNQ6190/PRO20217Q6UXQ8 127 aa12.41□□□□□ -0.42
MCF2L-203ENST00000375604 M0R378 163 aa12.41□□□□□ -0.42
MCF2L-203ENST00000375604 CUL9Q8IWT3 2517 aa12.41□□□□□ -0.42
MCF2L-203ENST00000375604 MRGPRG-AS1Q2M3A8 158 aa12.4□□□□□ -0.42
MCF2L-203ENST00000375604 C6orf223Q8N319 242 aa12.4□□□□□ -0.42
MCF2L-203ENST00000375604 LINC00694P0DN24 101 aa12.4□□□□□ -0.42
MCF2L-203ENST00000375604 IGLV4-60A0A075B6I1 120 aa12.4□□□□□ -0.42
MCF2L-203ENST00000375604 C3orf22Q8N5N4 141 aa12.4□□□□□ -0.42
MCF2L-203ENST00000375604 PDE6GP18545 87 aa12.4□□□□□ -0.42
MCF2L-203ENST00000375604 UBE2D2P62837 147 aa12.4□□□□□ -0.42
MCF2L-203ENST00000375604 CPAMD8Q8IZJ3 1885 aa12.4□□□□□ -0.43
MCF2L-203ENST00000375604 PLXNB1O43157 2135 aa12.39□□□□□ -0.43
MCF2L-203ENST00000375604 PRRC2AP48634 2157 aaKnown RBP12.39□□□□□ -0.43
MCF2L-203ENST00000375604 CIRBP-AS1Q8TBR5 109 aa12.39□□□□□ -0.43
MCF2L-203ENST00000375604 J3KT08 172 aa12.39□□□□□ -0.43
MCF2L-203ENST00000375604 CDC42SE2Q9NRR3 84 aa12.39□□□□□ -0.43
MCF2L-203ENST00000375604 Q6ZSN1 163 aa12.38□□□□□ -0.43
MCF2L-203ENST00000375604 YPEL4Q96NS1 127 aa12.38□□□□□ -0.43
MCF2L-203ENST00000375604 PYGO1Q9Y3Y4 419 aa12.38□□□□□ -0.43
MCF2L-203ENST00000375604 M0QXV9 152 aa12.37□□□□□ -0.43
MCF2L-203ENST00000375604 TRBV30A0A0K0K1B3 111 aa12.37□□□□□ -0.43
MCF2L-203ENST00000375604 ZNF580Q9UK33 172 aa12.37□□□□□ -0.43
MCF2L-203ENST00000375604 ADAMTS20P59510 1910 aa12.36□□□□□ -0.43
MCF2L-203ENST00000375604 C2orf91Q6ZV80 131 aa12.36□□□□□ -0.43
MCF2L-203ENST00000375604 IGLV5-52A0A0A0MRZ9 124 aa12.35□□□□□ -0.43
MCF2L-203ENST00000375604 POLR2KP53803 58 aaKnown RBP12.35□□□□□ -0.43
MCF2L-203ENST00000375604 ZNF73O43830 326 aaPredicted RBP12.35□□□□□ -0.43
MCF2L-203ENST00000375604 NUPR2A6NF83 97 aa12.33□□□□□ -0.44
MCF2L-203ENST00000375604 PTPN13Q12923 2485 aa12.33□□□□□ -0.44
MCF2L-203ENST00000375604 NDUFC2O95298 119 aa12.33□□□□□ -0.44
MCF2L-203ENST00000375604 CHCHD7Q9BUK0 85 aa12.32□□□□□ -0.44
MCF2L-203ENST00000375604 DHRS4-AS1Q9P1J3 65 aa12.32□□□□□ -0.44
MCF2L-203ENST00000375604 FHL2Q14192 279 aa12.32□□□□□ -0.44
MCF2L-203ENST00000375604 IGLV1-51P01701 117 aa12.31□□□□□ -0.44
MCF2L-203ENST00000375604 DEFB116Q30KQ4 102 aa12.31□□□□□ -0.44
MCF2L-203ENST00000375604 CELA1Q9UNI1 258 aa12.31□□□□□ -0.44
MCF2L-203ENST00000375604 LINC00242Q5T6M2 205 aa12.3□□□□□ -0.44
MCF2L-203ENST00000375604 ZNF706Q9Y5V0 76 aaPredicted RBP12.3□□□□□ -0.44
MCF2L-203ENST00000375604 MRPS36P82909 103 aaKnown RBP12.3□□□□□ -0.44
MCF2L-203ENST00000375604 SPG11Q96JI7 2443 aa12.29□□□□□ -0.44
MCF2L-203ENST00000375604 LINC01556Q5JQF7 62 aa12.29□□□□□ -0.44
MCF2L-203ENST00000375604 CSPG4Q6UVK1 2322 aa12.29□□□□□ -0.44
MCF2L-203ENST00000375604 A0A0U1RQV1 116 aa12.29□□□□□ -0.44
MCF2L-203ENST00000375604 A0A087WYN8 130 aa12.29□□□□□ -0.44
MCF2L-203ENST00000375604 TRBV10-3A0A0K0K1G6 114 aa12.28□□□□□ -0.44
MCF2L-203ENST00000375604 TSPEAR-AS2P59090 65 aa12.28□□□□□ -0.44
MCF2L-203ENST00000375604 C10orf25Q5T742 122 aa12.28□□□□□ -0.44
MCF2L-203ENST00000375604 IGIPA6NJ69 53 aa12.28□□□□□ -0.44
MCF2L-203ENST00000375604 Q8IZM0 81 aa12.28□□□□□ -0.44
MCF2L-203ENST00000375604 FAM236DA0A1B0GTK5 79 aa12.27□□□□□ -0.44
MCF2L-203ENST00000375604 FAM236CP0DP71 79 aa12.27□□□□□ -0.44
MCF2L-203ENST00000375604 A8MTW9 85 aa12.27□□□□□ -0.45
MCF2L-203ENST00000375604 REG3GQ6UW15 175 aa12.27□□□□□ -0.45
MCF2L-203ENST00000375604 C1orf137Q5JT78 98 aa12.26□□□□□ -0.45
MCF2L-203ENST00000375604 EML5Q05BV3 1969 aa12.26□□□□□ -0.45
MCF2L-203ENST00000375604 URB1-AS1Q96HZ7 61 aa12.25□□□□□ -0.45
MCF2L-203ENST00000375604 HIVEP3Q5T1R4 2406 aa12.25□□□□□ -0.45
MCF2L-203ENST00000375604 COX17Q14061 63 aa12.25□□□□□ -0.45
MCF2L-203ENST00000375604 LST1O00453 97 aa12.24□□□□□ -0.45
MCF2L-203ENST00000375604 ESRGQ1W209 222 aa12.24□□□□□ -0.45
MCF2L-203ENST00000375604 SMIM1B2RUZ4 78 aa12.24□□□□□ -0.45
MCF2L-203ENST00000375604 TIMM17BO60830 172 aa12.23□□□□□ -0.45
MCF2L-203ENST00000375604 ADAMTSL4-AS1Q5T5F5 129 aa12.23□□□□□ -0.45
MCF2L-203ENST00000375604 TTC28Q96AY4 2481 aa12.23□□□□□ -0.45
MCF2L-203ENST00000375604 IGHV6-1A0A0B4J1U7 121 aa12.23□□□□□ -0.45
MCF2L-203ENST00000375604 X6R8D5 127 aa12.22□□□□□ -0.45
MCF2L-203ENST00000375604 C16orf95Q9H693 158 aa12.22□□□□□ -0.45
MCF2L-203ENST00000375604 LINC00474Q9P2X8 69 aa12.22□□□□□ -0.45
MCF2L-203ENST00000375604 C10orf142B7Z368 130 aa12.21□□□□□ -0.45
MCF2L-203ENST00000375604 SORL1Q92673 2214 aa12.2□□□□□ -0.46
MCF2L-203ENST00000375604 LYPD5Q6UWN5 251 aa12.2□□□□□ -0.46
MCF2L-203ENST00000375604 ANKHD1Q8IWZ3 2542 aaKnown RBP12.19□□□□□ -0.46
MCF2L-203ENST00000375604 UQCRQO14949 82 aa12.19□□□□□ -0.46
MCF2L-203ENST00000375604 LINC00310P59036 64 aa12.19□□□□□ -0.46
MCF2L-203ENST00000375604 CCDC179H3BU77 68 aa12.18□□□□□ -0.46
MCF2L-203ENST00000375604 C1orf134Q5TEV5 83 aa12.18□□□□□ -0.46
MCF2L-203ENST00000375604 UTRNP46939 3433 aa12.18□□□□□ -0.46
MCF2L-203ENST00000375604 Q8N814 137 aa12.17□□□□□ -0.46
MCF2L-203ENST00000375604 PIEZO2Q9H5I5 2752 aa12.17□□□□□ -0.46
MCF2L-203ENST00000375604 RPL28P46779 137 aaKnown RBP12.16□□□□□ -0.46
MCF2L-203ENST00000375604 Q6ZVQ6 151 aa12.16□□□□□ -0.46
MCF2L-203ENST00000375604 A0A087WVE0 104 aa12.15□□□□□ -0.46
MCF2L-203ENST00000375604 NOTCH2Q04721 2471 aa12.15□□□□□ -0.46
MCF2L-203ENST00000375604 PRLHP81277 87 aa12.15□□□□□ -0.46
MCF2L-203ENST00000375604 ATP5EP2Q5VTU8 51 aa12.15□□□□□ -0.46
MCF2L-203ENST00000375604 Q9BRP9 147 aa12.14□□□□□ -0.47
MCF2L-203ENST00000375604 CNFNQ9BYD5 112 aa12.14□□□□□ -0.47
MCF2L-203ENST00000375604 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.14□□□□□ -0.47
MCF2L-203ENST00000375604 FAM19A3Q7Z5A8 133 aa12.14□□□□□ -0.47
MCF2L-203ENST00000375604 TET2Q6N021 2002 aaPredicted RBP12.14□□□□□ -0.47
MCF2L-203ENST00000375604 XGP55808 180 aa12.13□□□□□ -0.47
MCF2L-203ENST00000375604 NDUFC2-KCTD14E9PQ53 114 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms