RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 MEIG1Q5JSS6 88 aa12.77□□□□□ -0.36
PHF1-201ENST00000374512 TMEM243Q9BU79 118 aa12.77□□□□□ -0.36
PHF1-201ENST00000374512 CCDC168Q8NDH2 2452 aa12.77□□□□□ -0.37
PHF1-201ENST00000374512 PF4P02776 101 aa12.77□□□□□ -0.37
PHF1-201ENST00000374512 UBE2L6O14933 153 aa12.76□□□□□ -0.37
PHF1-201ENST00000374512 TRACP01848 142 aa12.76□□□□□ -0.37
PHF1-201ENST00000374512 FLNAP21333 2647 aaKnown RBP12.76□□□□□ -0.37
PHF1-201ENST00000374512 WNK1Q9H4A3 2382 aa12.76□□□□□ -0.37
PHF1-201ENST00000374512 TENM4Q6N022 2769 aa12.76□□□□□ -0.37
PHF1-201ENST00000374512 GAGE5Q13069 117 aa12.76□□□□□ -0.37
PHF1-201ENST00000374512 GAGE6Q13070 117 aa12.76□□□□□ -0.37
PHF1-201ENST00000374512 SOSTDC1Q6X4U4 206 aa12.76□□□□□ -0.37
PHF1-201ENST00000374512 GAGE12JA6NER3 117 aa12.75□□□□□ -0.37
PHF1-201ENST00000374512 GAGE4Q13068 117 aa12.75□□□□□ -0.37
PHF1-201ENST00000374512 C16orf74Q96GX8 76 aa12.75□□□□□ -0.37
PHF1-201ENST00000374512 NDUFA7O95182 113 aa12.74□□□□□ -0.37
PHF1-201ENST00000374512 NHLRC4P0CG21 123 aaPredicted RBP12.74□□□□□ -0.37
PHF1-201ENST00000374512 FAM110AQ9BQ89 295 aa12.74□□□□□ -0.37
PHF1-201ENST00000374512 TRBV6-4A0A1B0GX49 114 aa12.74□□□□□ -0.37
PHF1-201ENST00000374512 AKAP9Q99996 3911 aa12.74□□□□□ -0.37
PHF1-201ENST00000374512 NOP10Q9NPE3 64 aaKnown RBP12.73□□□□□ -0.37
PHF1-201ENST00000374512 FAM222AQ5U5X8 452 aa12.73□□□□□ -0.37
PHF1-201ENST00000374512 TRAV13-2A0A0B4J235 113 aa12.72□□□□□ -0.37
PHF1-201ENST00000374512 RNASE1P07998 156 aaKnown RBP12.72□□□□□ -0.37
PHF1-201ENST00000374512 A0A0U1RRA0 63 aa12.72□□□□□ -0.37
PHF1-201ENST00000374512 PDZD2O15018 2839 aa12.71□□□□□ -0.37
PHF1-201ENST00000374512 LINC01006Q8NI28 216 aa12.71□□□□□ -0.37
PHF1-201ENST00000374512 OVOL2Q9BRP0 275 aa12.71□□□□□ -0.37
PHF1-201ENST00000374512 C16orf95Q9H693 158 aa12.71□□□□□ -0.37
PHF1-201ENST00000374512 TRBV7-7A0A0K0K1E9 115 aa12.7□□□□□ -0.38
PHF1-201ENST00000374512 TRGV2A0A075B6R0 118 aa12.69□□□□□ -0.38
PHF1-201ENST00000374512 PLAC8L1A1L4L8 177 aa12.69□□□□□ -0.38
PHF1-201ENST00000374512 GIG44P09565 113 aaPredicted RBP12.69□□□□□ -0.38
PHF1-201ENST00000374512 GAGE7O76087 117 aa12.69□□□□□ -0.38
PHF1-201ENST00000374512 GAGE12FP0CL80 117 aa12.69□□□□□ -0.38
PHF1-201ENST00000374512 GAGE12GP0CL81 117 aa12.69□□□□□ -0.38
PHF1-201ENST00000374512 GAGE12IP0CL82 117 aa12.69□□□□□ -0.38
PHF1-201ENST00000374512 COX7B2Q8TF08 81 aa12.69□□□□□ -0.38
PHF1-201ENST00000374512 RPL28P46779 137 aaKnown RBP12.68□□□□□ -0.38
PHF1-201ENST00000374512 IMUPQ9GZP8 106 aa12.68□□□□□ -0.38
PHF1-201ENST00000374512 CRPP02741 224 aa12.66□□□□□ -0.38
PHF1-201ENST00000374512 BAALC-AS2P0C853 105 aa12.66□□□□□ -0.38
PHF1-201ENST00000374512 ACANP16112 2415 aa12.65□□□□□ -0.38
PHF1-201ENST00000374512 ANK3Q12955 4377 aaKnown RBP12.65□□□□□ -0.38
PHF1-201ENST00000374512 TRGV4A0A0C4DH28 118 aa12.65□□□□□ -0.38
PHF1-201ENST00000374512 IGLV1-51P01701 117 aa12.65□□□□□ -0.38
PHF1-201ENST00000374512 CSNK1G2-AS1Q8NCQ2 148 aa12.64□□□□□ -0.39
PHF1-201ENST00000374512 TRBV6-8A0A0A6YYG3 113 aa12.64□□□□□ -0.39
PHF1-201ENST00000374512 INAFM2P0DMQ5 153 aa12.64□□□□□ -0.39
PHF1-201ENST00000374512 HILS1P60008 231 aa12.63□□□□□ -0.39
PHF1-201ENST00000374512 MIR7-3HGQ8N6C7 128 aa12.63□□□□□ -0.39
PHF1-201ENST00000374512 IGHV3OR16-9A0A0B4J2B5 98 aa12.62□□□□□ -0.39
PHF1-201ENST00000374512 IBA57-AS1B1ANH7 110 aa12.62□□□□□ -0.39
PHF1-201ENST00000374512 WFDC10AQ9H1F0 79 aa12.62□□□□□ -0.39
PHF1-201ENST00000374512 SND1-IT1Q9HBX3 110 aa12.62□□□□□ -0.39
PHF1-201ENST00000374512 C19orf73Q9NVV2 129 aa12.62□□□□□ -0.39
PHF1-201ENST00000374512 HELZ2Q9BYK8 2649 aaKnown RBP12.62□□□□□ -0.39
PHF1-201ENST00000374512 SDIM1Q6ZPB5 146 aa12.62□□□□□ -0.39
PHF1-201ENST00000374512 LINC00643Q86TS7 51 aa12.62□□□□□ -0.39
PHF1-201ENST00000374512 NF1P21359 2839 aa12.62□□□□□ -0.39
PHF1-201ENST00000374512 A0A087WZ39 114 aa12.61□□□□□ -0.39
PHF1-201ENST00000374512 LOC100131303A0A0U1RQF7 123 aa12.61□□□□□ -0.39
PHF1-201ENST00000374512 RPL35AP18077 110 aaKnown RBP12.61□□□□□ -0.39
PHF1-201ENST00000374512 ITPR2Q14571 2701 aa12.61□□□□□ -0.39
PHF1-201ENST00000374512 B5MCH6 92 aa12.61□□□□□ -0.39
PHF1-201ENST00000374512 FHL2Q14192 279 aa12.61□□□□□ -0.39
PHF1-201ENST00000374512 H0YGX0 51 aa12.6□□□□□ -0.39
PHF1-201ENST00000374512 FAM218AQ96MZ4 157 aa12.6□□□□□ -0.39
PHF1-201ENST00000374512 LINC00337Q8N6G1 96 aa12.6□□□□□ -0.39
PHF1-201ENST00000374512 IGKV2-28A0A075B6P5 120 aa12.59□□□□□ -0.39
PHF1-201ENST00000374512 IGKV2D-28P01615 120 aa12.59□□□□□ -0.39
PHF1-201ENST00000374512 LINC00158P58513 81 aa12.58□□□□□ -0.39
PHF1-201ENST00000374512 CHCHD5Q9BSY4 110 aa12.58□□□□□ -0.39
PHF1-201ENST00000374512 TOMM7Q9P0U1 55 aa12.58□□□□□ -0.39
PHF1-201ENST00000374512 C22orf24Q9Y442 160 aa12.58□□□□□ -0.39
PHF1-201ENST00000374512 IGLV4-60A0A075B6I1 120 aa12.58□□□□□ -0.4
PHF1-201ENST00000374512 MALP21145 153 aa12.58□□□□□ -0.4
PHF1-201ENST00000374512 CUBNO60494 3623 aa12.58□□□□□ -0.4
PHF1-201ENST00000374512 NOTCH3Q9UM47 2321 aa12.57□□□□□ -0.4
PHF1-201ENST00000374512 CCDC179H3BU77 68 aa12.57□□□□□ -0.4
PHF1-201ENST00000374512 MTORP42345 2549 aa12.57□□□□□ -0.4
PHF1-201ENST00000374512 UNC79Q9P2D8 2635 aa12.57□□□□□ -0.4
PHF1-201ENST00000374512 CCL18P55774 89 aa12.56□□□□□ -0.4
PHF1-201ENST00000374512 DNAL4O96015 105 aa12.56□□□□□ -0.4
PHF1-201ENST00000374512 KIR2DL5BQ8NHK3 375 aa12.55□□□□□ -0.4
PHF1-201ENST00000374512 SMIM11BQ8TCY0 68 aa12.54□□□□□ -0.4
PHF1-201ENST00000374512 SS18L2Q9UHA2 77 aa12.54□□□□□ -0.4
PHF1-201ENST00000374512 CXCL5P42830 114 aa12.54□□□□□ -0.4
PHF1-201ENST00000374512 SMR3AQ99954 134 aa12.54□□□□□ -0.4
PHF1-201ENST00000374512 SETD2Q9BYW2 2564 aaPredicted RBP12.53□□□□□ -0.4
PHF1-201ENST00000374512 IGKV3OR2-268A0A0C4DH90 116 aa12.53□□□□□ -0.4
PHF1-201ENST00000374512 LINC00959A0A1B0GUT2 108 aa12.53□□□□□ -0.4
PHF1-201ENST00000374512 LINC01561Q8N1V8 128 aa12.53□□□□□ -0.4
PHF1-201ENST00000374512 ATP5G1P05496 136 aa12.53□□□□□ -0.4
PHF1-201ENST00000374512 LINC00612Q8N6U2 182 aa12.53□□□□□ -0.4
PHF1-201ENST00000374512 SMCR5Q8TEV8 140 aa12.53□□□□□ -0.4
PHF1-201ENST00000374512 JMJD1CQ15652 2540 aa12.52□□□□□ -0.4
PHF1-201ENST00000374512 A0A1B0GUV1 79 aa12.52□□□□□ -0.41
PHF1-201ENST00000374512 Q9HAA7 133 aa12.52□□□□□ -0.41
PHF1-201ENST00000374512 GCN1Q92616 2671 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms