RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 LINC01547P58512 204 aaPredicted RBP11.37□□□□□ -0.59
COL5A1-201ENST00000371817 MAP6D1Q9H9H5 199 aa11.37□□□□□ -0.59
COL5A1-201ENST00000371817 ZNF706Q9Y5V0 76 aaPredicted RBP11.37□□□□□ -0.59
COL5A1-201ENST00000371817 IGF1P05019 195 aa11.36□□□□□ -0.59
COL5A1-201ENST00000371817 ZNF73O43830 326 aaPredicted RBP11.36□□□□□ -0.59
COL5A1-201ENST00000371817 MUC7Q8TAX7 377 aa11.35□□□□□ -0.59
COL5A1-201ENST00000371817 C10orf25Q5T742 122 aa11.35□□□□□ -0.59
COL5A1-201ENST00000371817 CRIP2P52943 208 aaPredicted RBP11.34□□□□□ -0.59
COL5A1-201ENST00000371817 H0Y9P7 68 aa11.34□□□□□ -0.59
COL5A1-201ENST00000371817 FAM215AQ9Y5M1 114 aa11.34□□□□□ -0.59
COL5A1-201ENST00000371817 hDV103S1A0JD37 113 aa11.34□□□□□ -0.59
COL5A1-201ENST00000371817 TSHBP01222 138 aa11.34□□□□□ -0.59
COL5A1-201ENST00000371817 UBE2D1P51668 147 aa11.34□□□□□ -0.59
COL5A1-201ENST00000371817 TLN1Q9Y490 2541 aaKnown RBP11.34□□□□□ -0.59
COL5A1-201ENST00000371817 LY6LH3BQJ8 138 aa11.34□□□□□ -0.59
COL5A1-201ENST00000371817 CD164L2Q6UWJ8 174 aa11.33□□□□□ -0.6
COL5A1-201ENST00000371817 IGLV1-47P01700 117 aa11.33□□□□□ -0.6
COL5A1-201ENST00000371817 J3QKU1 62 aa11.32□□□□□ -0.6
COL5A1-201ENST00000371817 SETD2Q9BYW2 2564 aaPredicted RBP11.31□□□□□ -0.6
COL5A1-201ENST00000371817 SYCNQ0VAF6 134 aa11.31□□□□□ -0.6
COL5A1-201ENST00000371817 EIF4EBP1Q13541 118 aaPredicted RBP11.31□□□□□ -0.6
COL5A1-201ENST00000371817 CCDC140Q96MF4 163 aa11.3□□□□□ -0.6
COL5A1-201ENST00000371817 ZNF295-AS1Q8N0V1 137 aa11.29□□□□□ -0.6
COL5A1-201ENST00000371817 PLAC8L1A1L4L8 177 aa11.29□□□□□ -0.6
COL5A1-201ENST00000371817 IGLV2-11P01706 119 aa11.29□□□□□ -0.6
COL5A1-201ENST00000371817 TRBV10-3A0A0K0K1G6 114 aa11.29□□□□□ -0.6
COL5A1-201ENST00000371817 COL4A6Q14031 1691 aa11.29□□□□□ -0.6
COL5A1-201ENST00000371817 C1orf137Q5JT78 98 aa11.28□□□□□ -0.6
COL5A1-201ENST00000371817 TRBV6-4A0A1B0GX49 114 aa11.28□□□□□ -0.6
COL5A1-201ENST00000371817 CDIP1Q9H305 208 aa11.28□□□□□ -0.6
COL5A1-201ENST00000371817 C8orf87E5RJ46 101 aa11.28□□□□□ -0.6
COL5A1-201ENST00000371817 A0A087WYN8 130 aa11.28□□□□□ -0.6
COL5A1-201ENST00000371817 ZNF843Q8N446 348 aa11.28□□□□□ -0.6
COL5A1-201ENST00000371817 C11orf45Q8TAV5 145 aa11.28□□□□□ -0.6
COL5A1-201ENST00000371817 IGLV9-49A0A0B4J1Y8 123 aa11.27□□□□□ -0.61
COL5A1-201ENST00000371817 PLA2G2AP14555 144 aa11.27□□□□□ -0.61
COL5A1-201ENST00000371817 LINC00575Q6W349 94 aa11.27□□□□□ -0.61
COL5A1-201ENST00000371817 PLA2G5P39877 138 aa11.27□□□□□ -0.61
COL5A1-201ENST00000371817 PIEZO2Q9H5I5 2752 aa11.26□□□□□ -0.61
COL5A1-201ENST00000371817 Q8IZM0 81 aa11.26□□□□□ -0.61
COL5A1-201ENST00000371817 CNFNQ9BYD5 112 aa11.26□□□□□ -0.61
COL5A1-201ENST00000371817 PCOTHQ58A44 107 aa11.26□□□□□ -0.61
COL5A1-201ENST00000371817 RPL37AP8A6NKH3 93 aa11.25□□□□□ -0.61
COL5A1-201ENST00000371817 HILS1P60008 231 aa11.25□□□□□ -0.61
COL5A1-201ENST00000371817 SMAD5-AS1Q9Y6J3 95 aa11.25□□□□□ -0.61
COL5A1-201ENST00000371817 LOC100131303A0A0U1RQF7 123 aa11.25□□□□□ -0.61
COL5A1-201ENST00000371817 MYCNOSP40205 109 aa11.25□□□□□ -0.61
COL5A1-201ENST00000371817 C7orf33Q8WU49 177 aa11.24□□□□□ -0.61
COL5A1-201ENST00000371817 PROK1P58294 105 aa11.24□□□□□ -0.61
COL5A1-201ENST00000371817 THSD7BQ9C0I4 1608 aa11.24□□□□□ -0.61
COL5A1-201ENST00000371817 IGLV4-69A0A075B6H9 119 aa11.24□□□□□ -0.61
COL5A1-201ENST00000371817 K7EQG2 157 aa11.24□□□□□ -0.61
COL5A1-201ENST00000371817 Q8N7P7 452 aa11.23□□□□□ -0.61
COL5A1-201ENST00000371817 HCG22E2RYF7 251 aa11.23□□□□□ -0.61
COL5A1-201ENST00000371817 POLR2KP53803 58 aaKnown RBP11.23□□□□□ -0.61
COL5A1-201ENST00000371817 X6R8D5 127 aa11.23□□□□□ -0.61
COL5A1-201ENST00000371817 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.23□□□□□ -0.61
COL5A1-201ENST00000371817 RNASE3P12724 160 aaKnown RBP11.23□□□□□ -0.61
COL5A1-201ENST00000371817 ZFHX2Q9C0A1 2572 aaPredicted RBP11.23□□□□□ -0.61
COL5A1-201ENST00000371817 A6NDX4 124 aa11.22□□□□□ -0.61
COL5A1-201ENST00000371817 IGIPA6NJ69 53 aa11.22□□□□□ -0.61
COL5A1-201ENST00000371817 A0A1B0GU69 56 aa11.22□□□□□ -0.61
COL5A1-201ENST00000371817 FLG2Q5D862 2391 aaPredicted RBP11.22□□□□□ -0.61
COL5A1-201ENST00000371817 LINC00846Q9NV44 126 aa11.21□□□□□ -0.61
COL5A1-201ENST00000371817 LINC00574Q9H8X3 128 aa11.21□□□□□ -0.61
COL5A1-201ENST00000371817 PKD1L2Q7Z442 2459 aa11.21□□□□□ -0.62
COL5A1-201ENST00000371817 LINC00959A0A1B0GUT2 108 aa11.21□□□□□ -0.62
COL5A1-201ENST00000371817 LINC00310P59036 64 aa11.21□□□□□ -0.62
COL5A1-201ENST00000371817 SPINT4Q6UDR6 99 aa11.2□□□□□ -0.62
COL5A1-201ENST00000371817 ZFP36P26651 326 aaKnown RBP11.19□□□□□ -0.62
COL5A1-201ENST00000371817 IGHV6-1A0A0B4J1U7 121 aa11.19□□□□□ -0.62
COL5A1-201ENST00000371817 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.18□□□□□ -0.62
COL5A1-201ENST00000371817 LY6G6EA0A0G2JKS1 128 aa11.18□□□□□ -0.62
COL5A1-201ENST00000371817 U3KQA8 63 aa11.18□□□□□ -0.62
COL5A1-201ENST00000371817 TNFRSF13BO14836 293 aaPredicted RBP11.18□□□□□ -0.62
COL5A1-201ENST00000371817 BRWD1-AS2P59051 145 aa11.18□□□□□ -0.62
COL5A1-201ENST00000371817 SPINK1P00995 79 aa11.17□□□□□ -0.62
COL5A1-201ENST00000371817 GRNP28799 593 aaKnown RBP11.17□□□□□ -0.62
COL5A1-201ENST00000371817 CDC42SE2Q9NRR3 84 aa11.17□□□□□ -0.62
COL5A1-201ENST00000371817 C1orf64Q8NEQ6 169 aa11.17□□□□□ -0.62
COL5A1-201ENST00000371817 DEFB131BA0A096LNP1 70 aa11.17□□□□□ -0.62
COL5A1-201ENST00000371817 Q6ZSV7 163 aa11.17□□□□□ -0.62
COL5A1-201ENST00000371817 DEFB113Q30KQ7 82 aa11.16□□□□□ -0.62
COL5A1-201ENST00000371817 GAS8-AS1O95177 125 aa11.16□□□□□ -0.62
COL5A1-201ENST00000371817 IL17DQ8TAD2 202 aa11.15□□□□□ -0.62
COL5A1-201ENST00000371817 LINC00474Q9P2X8 69 aa11.15□□□□□ -0.62
COL5A1-201ENST00000371817 DEFB114Q30KQ6 69 aa11.14□□□□□ -0.63
COL5A1-201ENST00000371817 ADAMTSL4-AS1Q5T5F5 129 aa11.14□□□□□ -0.63
COL5A1-201ENST00000371817 CYSRT1A8MQ03 144 aa11.13□□□□□ -0.63
COL5A1-201ENST00000371817 LELP1Q5T871 98 aa11.13□□□□□ -0.63
COL5A1-201ENST00000371817 Q9UF83 564 aa11.13□□□□□ -0.63
COL5A1-201ENST00000371817 POLQO75417 2590 aa11.13□□□□□ -0.63
COL5A1-201ENST00000371817 KLLNB2CW77 178 aa11.13□□□□□ -0.63
COL5A1-201ENST00000371817 ABCA12Q86UK0 2595 aa11.13□□□□□ -0.63
COL5A1-201ENST00000371817 REG3GQ6UW15 175 aa11.13□□□□□ -0.63
COL5A1-201ENST00000371817 Q6ZPA2 131 aa11.13□□□□□ -0.63
COL5A1-201ENST00000371817 BCE1O60756 84 aa11.12□□□□□ -0.63
COL5A1-201ENST00000371817 PRM2P04554 102 aa11.12□□□□□ -0.63
COL5A1-201ENST00000371817 SMIM1B2RUZ4 78 aa11.12□□□□□ -0.63
COL5A1-201ENST00000371817 TSPEAR-AS2P59090 65 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms