RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 CFAP161Q6P656 301 aa9.73□□□□□ -0.85
SS18L1-202ENST00000370848 YPEL4Q96NS1 127 aa9.73□□□□□ -0.85
SS18L1-202ENST00000370848 AP5S1Q9NUS5 200 aa9.73□□□□□ -0.85
SS18L1-202ENST00000370848 CYSLTR1Q9Y271 337 aa9.73□□□□□ -0.85
SS18L1-202ENST00000370848 PANO1I0J062 215 aa9.72□□□□□ -0.85
SS18L1-202ENST00000370848 OXTP01178 125 aa9.72□□□□□ -0.85
SS18L1-202ENST00000370848 C5orf38Q86SI9 138 aa9.72□□□□□ -0.85
SS18L1-202ENST00000370848 PYGO1Q9Y3Y4 419 aa9.72□□□□□ -0.85
SS18L1-202ENST00000370848 IGHV1-58A0A0C4DH39 117 aa9.71□□□□□ -0.86
SS18L1-202ENST00000370848 CBLN2Q8IUK8 224 aa9.71□□□□□ -0.86
SS18L1-202ENST00000370848 PRSS3P2Q8NHM4 247 aa9.71□□□□□ -0.86
SS18L1-202ENST00000370848 TRAPPC1Q9Y5R8 145 aa9.71□□□□□ -0.86
SS18L1-202ENST00000370848 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.71□□□□□ -0.86
SS18L1-202ENST00000370848 COX7A2LO14548 114 aa9.7□□□□□ -0.86
SS18L1-202ENST00000370848 SDIM1Q6ZPB5 146 aa9.7□□□□□ -0.86
SS18L1-202ENST00000370848 LINC00173Q6ZV60 143 aa9.7□□□□□ -0.86
SS18L1-202ENST00000370848 TMEM141Q96I45 108 aa9.7□□□□□ -0.86
SS18L1-202ENST00000370848 IGIPA6NJ69 53 aa9.69□□□□□ -0.86
SS18L1-202ENST00000370848 K7EMI3 77 aa9.69□□□□□ -0.86
SS18L1-202ENST00000370848 MALP21145 153 aa9.69□□□□□ -0.86
SS18L1-202ENST00000370848 SERTAD4-AS1Q5TG53 156 aa9.69□□□□□ -0.86
SS18L1-202ENST00000370848 IGHV3-64A0A075B6Q5 118 aa9.68□□□□□ -0.86
SS18L1-202ENST00000370848 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.68□□□□□ -0.86
SS18L1-202ENST00000370848 LINC01546A6NGU7 62 aa9.68□□□□□ -0.86
SS18L1-202ENST00000370848 CHTF8P0CG12 524 aa9.68□□□□□ -0.86
SS18L1-202ENST00000370848 TOMM6Q96B49 74 aa9.68□□□□□ -0.86
SS18L1-202ENST00000370848 IGHV3OR16-9A0A0B4J2B5 98 aa9.67□□□□□ -0.86
SS18L1-202ENST00000370848 COX6A2Q02221 97 aa9.67□□□□□ -0.86
SS18L1-202ENST00000370848 LINC00242Q5T6M2 205 aa9.67□□□□□ -0.86
SS18L1-202ENST00000370848 TEX43Q6ZNM6 134 aa9.67□□□□□ -0.86
SS18L1-202ENST00000370848 URB1-AS1Q96HZ7 61 aa9.67□□□□□ -0.86
SS18L1-202ENST00000370848 AMELXQ99217 191 aa9.67□□□□□ -0.86
SS18L1-202ENST00000370848 UBR4Q5T4S7 5183 aa9.67□□□□□ -0.86
SS18L1-202ENST00000370848 IGLV4-69A0A075B6H9 119 aa9.66□□□□□ -0.86
SS18L1-202ENST00000370848 UBE2D1P51668 147 aa9.66□□□□□ -0.86
SS18L1-202ENST00000370848 FA2HQ7L5A8 372 aa9.66□□□□□ -0.86
SS18L1-202ENST00000370848 C18orf32Q8TCD1 76 aa9.66□□□□□ -0.86
SS18L1-202ENST00000370848 ZNF561-AS1K7EIQ3 104 aa9.65□□□□□ -0.86
SS18L1-202ENST00000370848 Q6ZN92 141 aa9.65□□□□□ -0.86
SS18L1-202ENST00000370848 CARD19Q96LW7 228 aa9.65□□□□□ -0.86
SS18L1-202ENST00000370848 TIMM17AQ99595 171 aa9.65□□□□□ -0.86
SS18L1-202ENST00000370848 SMCO4Q9NRQ5 59 aa9.65□□□□□ -0.86
SS18L1-202ENST00000370848 SPAG11BQ08648 103 aa9.64□□□□□ -0.87
SS18L1-202ENST00000370848 CIRBPQ14011 172 aaKnown RBP9.64□□□□□ -0.87
SS18L1-202ENST00000370848 SCGB3A1Q96QR1 104 aa9.64□□□□□ -0.87
SS18L1-202ENST00000370848 C2orf88Q9BSF0 95 aa9.64□□□□□ -0.87
SS18L1-202ENST00000370848 VCX2Q9H322 139 aa9.64□□□□□ -0.87
SS18L1-202ENST00000370848 A0A096LNJ9 63 aa9.63□□□□□ -0.87
SS18L1-202ENST00000370848 SYCNQ0VAF6 134 aa9.63□□□□□ -0.87
SS18L1-202ENST00000370848 Q6ZRU5 148 aa9.63□□□□□ -0.87
SS18L1-202ENST00000370848 ORAOV1Q8WV07 137 aa9.63□□□□□ -0.87
SS18L1-202ENST00000370848 APOMO95445 188 aa9.62□□□□□ -0.87
SS18L1-202ENST00000370848 NPSP0C0P6 89 aa9.62□□□□□ -0.87
SS18L1-202ENST00000370848 PMCHL1Q16048 86 aa9.62□□□□□ -0.87
SS18L1-202ENST00000370848 ERASQ7Z444 233 aa9.62□□□□□ -0.87
SS18L1-202ENST00000370848 SPACA4Q8TDM5 124 aa9.62□□□□□ -0.87
SS18L1-202ENST00000370848 A0A087WZ39 114 aa9.61□□□□□ -0.87
SS18L1-202ENST00000370848 A0A096LNI7 61 aa9.61□□□□□ -0.87
SS18L1-202ENST00000370848 IGKV2-24A0A0C4DH68 120 aa9.61□□□□□ -0.87
SS18L1-202ENST00000370848 G0S2P27469 103 aa9.61□□□□□ -0.87
SS18L1-202ENST00000370848 CAMK2N2Q96S95 79 aa9.61□□□□□ -0.87
SS18L1-202ENST00000370848 RPL37AP61513 92 aaKnown RBP9.6□□□□□ -0.87
SS18L1-202ENST00000370848 OR10D4PQ8NGN7 298 aa9.6□□□□□ -0.87
SS18L1-202ENST00000370848 A0A087WYN8 130 aa9.59□□□□□ -0.87
SS18L1-202ENST00000370848 A0A0J9YXV3 536 aa9.59□□□□□ -0.87
SS18L1-202ENST00000370848 LINC00614P0C842 121 aa9.59□□□□□ -0.87
SS18L1-202ENST00000370848 HNRNPA3P51991 378 aaKnown RBP9.59□□□□□ -0.87
SS18L1-202ENST00000370848 FAM19A3Q7Z5A8 133 aa9.59□□□□□ -0.87
SS18L1-202ENST00000370848 C2orf48Q96LS8 159 aa9.59□□□□□ -0.87
SS18L1-202ENST00000370848 MAJINQ3KP22 176 aa9.58□□□□□ -0.88
SS18L1-202ENST00000370848 PAPPA-AS1Q5QFB9 102 aa9.58□□□□□ -0.88
SS18L1-202ENST00000370848 C10orf25Q5T742 122 aa9.58□□□□□ -0.88
SS18L1-202ENST00000370848 SCO1O75880 301 aa9.57□□□□□ -0.88
SS18L1-202ENST00000370848 TRGC2P03986 189 aa9.57□□□□□ -0.88
SS18L1-202ENST00000370848 KIAA0087Q14695 138 aa9.57□□□□□ -0.88
SS18L1-202ENST00000370848 DPH3Q96FX2 82 aa9.57□□□□□ -0.88
SS18L1-202ENST00000370848 CDKN2A-AS1Q9UH64 79 aa9.57□□□□□ -0.88
SS18L1-202ENST00000370848 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.56□□□□□ -0.88
SS18L1-202ENST00000370848 HBDP02042 147 aa9.56□□□□□ -0.88
SS18L1-202ENST00000370848 UNQ6190/PRO20217Q6UXQ8 127 aa9.56□□□□□ -0.88
SS18L1-202ENST00000370848 CST9LQ9H4G1 147 aa9.56□□□□□ -0.88
SS18L1-202ENST00000370848 TNXBP22105 4242 aa9.55□□□□□ -0.88
SS18L1-202ENST00000370848 LINC01549A6NIU2 74 aa9.55□□□□□ -0.88
SS18L1-202ENST00000370848 COLCA2A8K830 154 aa9.55□□□□□ -0.88
SS18L1-202ENST00000370848 MT1HL1P0DM35 61 aa9.55□□□□□ -0.88
SS18L1-202ENST00000370848 HERVK_113P63121 156 aa9.55□□□□□ -0.88
SS18L1-202ENST00000370848 GAGE2BQ13066 116 aa9.55□□□□□ -0.88
SS18L1-202ENST00000370848 PDZD11Q5EBL8 140 aa9.55□□□□□ -0.88
SS18L1-202ENST00000370848 C2orf82Q6UX34 121 aa9.55□□□□□ -0.88
SS18L1-202ENST00000370848 GEMIN7Q9H840 131 aaKnown RBP9.55□□□□□ -0.88
SS18L1-202ENST00000370848 LOC107984640A0A0U1RRK4 108 aa9.54□□□□□ -0.88
SS18L1-202ENST00000370848 NDUFA1O15239 70 aa9.54□□□□□ -0.88
SS18L1-202ENST00000370848 RAB5BP61020 215 aa9.54□□□□□ -0.88
SS18L1-202ENST00000370848 PMVKQ15126 192 aa9.54□□□□□ -0.88
SS18L1-202ENST00000370848 LINC01561Q8N1V8 128 aa9.54□□□□□ -0.88
SS18L1-202ENST00000370848 STPG4Q8N801 248 aa9.54□□□□□ -0.88
SS18L1-202ENST00000370848 PLAC8Q9NZF1 115 aa9.54□□□□□ -0.88
SS18L1-202ENST00000370848 C6orf48Q9UBA6 75 aa9.54□□□□□ -0.88
SS18L1-202ENST00000370848 PTTG1IPP53801 180 aa9.53□□□□□ -0.88
SS18L1-202ENST00000370848 RPL18AQ02543 176 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms