RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 TRAV13-1A0A0B4J241 112 aa10.09□□□□□ -0.79
VMA21-202ENST00000370361 COMMD7Q86VX2 200 aa10.09□□□□□ -0.79
VMA21-202ENST00000370361 OR10D4PQ8NGN7 298 aa10.09□□□□□ -0.79
VMA21-202ENST00000370361 PRELID3AQ96N28 172 aa10.09□□□□□ -0.79
VMA21-202ENST00000370361 CAMK2N2Q96S95 79 aa10.09□□□□□ -0.79
VMA21-202ENST00000370361 IMMP2LQ96T52 175 aa10.09□□□□□ -0.79
VMA21-202ENST00000370361 SPANXA1Q9NS26 97 aa10.09□□□□□ -0.79
VMA21-202ENST00000370361 HMCN2Q8NDA2 5059 aa10.08□□□□□ -0.8
VMA21-202ENST00000370361 PRSS47A8MTI9 375 aa10.08□□□□□ -0.8
VMA21-202ENST00000370361 RNF151Q2KHN1 245 aa10.08□□□□□ -0.8
VMA21-202ENST00000370361 LINC00526Q96FQ7 95 aa10.08□□□□□ -0.8
VMA21-202ENST00000370361 CTDSP1Q9GZU7 261 aa10.08□□□□□ -0.8
VMA21-202ENST00000370361 MRPS36P82909 103 aaKnown RBP10.07□□□□□ -0.8
VMA21-202ENST00000370361 Q6ZUT4 128 aa10.07□□□□□ -0.8
VMA21-202ENST00000370361 LAMTOR2Q9Y2Q5 125 aa10.07□□□□□ -0.8
VMA21-202ENST00000370361 RPL39P62891 51 aaKnown RBP10.06□□□□□ -0.8
VMA21-202ENST00000370361 SPAG11BQ08648 103 aa10.05□□□□□ -0.8
VMA21-202ENST00000370361 GAGE2BQ13066 116 aa10.05□□□□□ -0.8
VMA21-202ENST00000370361 RNASE13Q5GAN3 156 aaKnown RBP10.05□□□□□ -0.8
VMA21-202ENST00000370361 C10orf91Q5T1B1 145 aa10.05□□□□□ -0.8
VMA21-202ENST00000370361 FAM104AQ969W3 186 aa10.05□□□□□ -0.8
VMA21-202ENST00000370361 TRAV9-1A0A075B6T8 112 aa10.04□□□□□ -0.8
VMA21-202ENST00000370361 A0A0J9YXV3 536 aa10.03□□□□□ -0.8
VMA21-202ENST00000370361 RAB5AP20339 215 aa10.03□□□□□ -0.8
VMA21-202ENST00000370361 C5orf38Q86SI9 138 aa10.03□□□□□ -0.8
VMA21-202ENST00000370361 MAP1LC3AQ9H492 121 aa10.03□□□□□ -0.8
VMA21-202ENST00000370361 MRPL35Q9NZE8 188 aaKnown RBP10.03□□□□□ -0.8
VMA21-202ENST00000370361 IGHV3OR16-9A0A0B4J2B5 98 aa10.02□□□□□ -0.81
VMA21-202ENST00000370361 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.02□□□□□ -0.81
VMA21-202ENST00000370361 SRSF9Q13242 221 aaKnown RBP eCLIP10.02□□□□□ -0.81
VMA21-202ENST00000370361 CARHSP1Q9Y2V2 147 aaKnown RBP10.02□□□□□ -0.81
VMA21-202ENST00000370361 LOC389332A0A1B0GUA5 103 aa10.01□□□□□ -0.81
VMA21-202ENST00000370361 NDUFA1O15239 70 aa10.01□□□□□ -0.81
VMA21-202ENST00000370361 IFI27P40305 119 aaPredicted RBP10.01□□□□□ -0.81
VMA21-202ENST00000370361 Q8N8P6 123 aa10.01□□□□□ -0.81
VMA21-202ENST00000370361 PYGO1Q9Y3Y4 419 aa10.01□□□□□ -0.81
VMA21-202ENST00000370361 TGIF2-C20orf24A0A0A6YYL0 155 aa10□□□□□ -0.81
VMA21-202ENST00000370361 IFITM10A6NMD0 228 aa10□□□□□ -0.81
VMA21-202ENST00000370361 RPL18AQ02543 176 aaKnown RBP10□□□□□ -0.81
VMA21-202ENST00000370361 C9orf116Q5BN46 136 aaPredicted RBP10□□□□□ -0.81
VMA21-202ENST00000370361 ORAOV1Q8WV07 137 aa10□□□□□ -0.81
VMA21-202ENST00000370361 OPRPNQ99935 248 aaPredicted RBP10□□□□□ -0.81
VMA21-202ENST00000370361 TLX1NBP0CAT3 122 aa9.99□□□□□ -0.81
VMA21-202ENST00000370361 S100PP25815 95 aa9.99□□□□□ -0.81
VMA21-202ENST00000370361 RHEBQ15382 184 aa9.98□□□□□ -0.81
VMA21-202ENST00000370361 A0A1W2PNN7 141 aa9.97□□□□□ -0.81
VMA21-202ENST00000370361 K7EMI3 77 aa9.97□□□□□ -0.81
VMA21-202ENST00000370361 MT-ND6P03923 174 aa9.97□□□□□ -0.81
VMA21-202ENST00000370361 KRTAP10-8P60410 259 aa9.97□□□□□ -0.81
VMA21-202ENST00000370361 KIAA1644Q3SXP7 199 aa9.97□□□□□ -0.81
VMA21-202ENST00000370361 GNB1LQ9BYB4 327 aa9.97□□□□□ -0.81
VMA21-202ENST00000370361 NXT2Q9NPJ8 142 aaKnown RBP9.97□□□□□ -0.81
VMA21-202ENST00000370361 IGLV4-3A0A075B6K6 122 aa9.96□□□□□ -0.82
VMA21-202ENST00000370361 A0A087WZ39 114 aa9.96□□□□□ -0.82
VMA21-202ENST00000370361 NPSP0C0P6 89 aa9.96□□□□□ -0.82
VMA21-202ENST00000370361 LINC01561Q8N1V8 128 aa9.96□□□□□ -0.82
VMA21-202ENST00000370361 TMEM141Q96I45 108 aa9.96□□□□□ -0.82
VMA21-202ENST00000370361 RPS10P5Q9NQ39 176 aa9.96□□□□□ -0.82
VMA21-202ENST00000370361 ORMDL2Q53FV1 153 aa9.95□□□□□ -0.82
VMA21-202ENST00000370361 C2orf66Q6UXQ4 117 aa9.95□□□□□ -0.82
VMA21-202ENST00000370361 C2orf88Q9BSF0 95 aa9.95□□□□□ -0.82
VMA21-202ENST00000370361 PSORS1C2Q9UIG4 136 aa9.95□□□□□ -0.82
VMA21-202ENST00000370361 CYSLTR1Q9Y271 337 aa9.95□□□□□ -0.82
VMA21-202ENST00000370361 TRBV30A0A0K0K1B3 111 aa9.94□□□□□ -0.82
VMA21-202ENST00000370361 G0S2P27469 103 aa9.94□□□□□ -0.82
VMA21-202ENST00000370361 COX19Q49B96 90 aa9.94□□□□□ -0.82
VMA21-202ENST00000370361 Q6ZN92 141 aa9.94□□□□□ -0.82
VMA21-202ENST00000370361 TEX43Q6ZNM6 134 aa9.94□□□□□ -0.82
VMA21-202ENST00000370361 TNXBP22105 4242 aa9.93□□□□□ -0.82
VMA21-202ENST00000370361 LINC00242Q5T6M2 205 aa9.92□□□□□ -0.82
VMA21-202ENST00000370361 DIRC1Q969H9 104 aa9.92□□□□□ -0.82
VMA21-202ENST00000370361 ALKBH7Q9BT30 221 aaPredicted RBP9.92□□□□□ -0.82
VMA21-202ENST00000370361 IGIPA6NJ69 53 aa9.91□□□□□ -0.82
VMA21-202ENST00000370361 APOC3P02656 99 aa9.91□□□□□ -0.82
VMA21-202ENST00000370361 C1orf137Q5JT78 98 aa9.91□□□□□ -0.82
VMA21-202ENST00000370361 PAPPA-AS1Q5QFB9 102 aa9.91□□□□□ -0.82
VMA21-202ENST00000370361 LINC00173Q6ZV60 143 aa9.91□□□□□ -0.82
VMA21-202ENST00000370361 C6orf48Q9UBA6 75 aa9.91□□□□□ -0.82
VMA21-202ENST00000370361 SEC11AP67812 179 aa9.9□□□□□ -0.82
VMA21-202ENST00000370361 KIAA0087Q14695 138 aa9.9□□□□□ -0.82
VMA21-202ENST00000370361 UNQ6190/PRO20217Q6UXQ8 127 aa9.9□□□□□ -0.82
VMA21-202ENST00000370361 PHF5AQ7RTV0 110 aaKnown RBP9.9□□□□□ -0.82
VMA21-202ENST00000370361 PACRGQ96M98 296 aaPredicted RBP9.9□□□□□ -0.82
VMA21-202ENST00000370361 AMELXQ99217 191 aa9.9□□□□□ -0.82
VMA21-202ENST00000370361 MRPL18Q9H0U6 180 aaKnown RBP9.9□□□□□ -0.82
VMA21-202ENST00000370361 LINC01546A6NGU7 62 aa9.89□□□□□ -0.83
VMA21-202ENST00000370361 UBE2D1P51668 147 aa9.89□□□□□ -0.83
VMA21-202ENST00000370361 ODF1Q14990 250 aa9.89□□□□□ -0.83
VMA21-202ENST00000370361 ZC2HC1BQ5TFG8 222 aa9.89□□□□□ -0.83
VMA21-202ENST00000370361 TOMM6Q96B49 74 aa9.89□□□□□ -0.83
VMA21-202ENST00000370361 VCX2Q9H322 139 aa9.89□□□□□ -0.83
VMA21-202ENST00000370361 UBR4Q5T4S7 5183 aa9.88□□□□□ -0.83
VMA21-202ENST00000370361 NDUFC2-KCTD14E9PQ53 114 aa9.88□□□□□ -0.83
VMA21-202ENST00000370361 SNAPINO95295 136 aa9.88□□□□□ -0.83
VMA21-202ENST00000370361 IGLV7-43P04211 117 aa9.88□□□□□ -0.83
VMA21-202ENST00000370361 FABP9Q0Z7S8 132 aa9.88□□□□□ -0.83
VMA21-202ENST00000370361 NDUFA5Q16718 116 aa9.88□□□□□ -0.83
VMA21-202ENST00000370361 C10orf25Q5T742 122 aa9.88□□□□□ -0.83
VMA21-202ENST00000370361 SVBPQ8N300 66 aa9.88□□□□□ -0.83
VMA21-202ENST00000370361 PRSS2P07478 247 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms