RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 CSPG4Q6UVK1 2322 aa11.54□□□□□ -0.56
COL17A1-202ENST00000369733 COX17Q14061 63 aa11.54□□□□□ -0.56
COL17A1-202ENST00000369733 Q8IZM0 81 aa11.53□□□□□ -0.56
COL17A1-202ENST00000369733 WDR87Q6ZQQ6 2873 aa11.53□□□□□ -0.56
COL17A1-202ENST00000369733 HIGD2AQ9BW72 106 aa11.53□□□□□ -0.56
COL17A1-202ENST00000369733 C2CD3Q4AC94 2353 aa11.53□□□□□ -0.56
COL17A1-202ENST00000369733 SMCPP49901 116 aaPredicted RBP11.52□□□□□ -0.56
COL17A1-202ENST00000369733 KLK5Q9Y337 293 aaPredicted RBP11.52□□□□□ -0.57
COL17A1-202ENST00000369733 WFDC10AQ9H1F0 79 aa11.52□□□□□ -0.57
COL17A1-202ENST00000369733 NTM-AS1Q6ZSK4 140 aa11.51□□□□□ -0.57
COL17A1-202ENST00000369733 TRAV7A0A075B6U4 112 aa11.51□□□□□ -0.57
COL17A1-202ENST00000369733 TET2Q6N021 2002 aaPredicted RBP11.51□□□□□ -0.57
COL17A1-202ENST00000369733 Q8N814 137 aa11.51□□□□□ -0.57
COL17A1-202ENST00000369733 ACACBO00763 2458 aa11.51□□□□□ -0.57
COL17A1-202ENST00000369733 IGKV2-24A0A0C4DH68 120 aa11.5□□□□□ -0.57
COL17A1-202ENST00000369733 CDSNQ15517 529 aa11.5□□□□□ -0.57
COL17A1-202ENST00000369733 PRO0461Q9UI25 63 aa11.5□□□□□ -0.57
COL17A1-202ENST00000369733 FAM19A5Q7Z5A7 132 aaPredicted RBP11.5□□□□□ -0.57
COL17A1-202ENST00000369733 SMIM26A0A096LP01 95 aa11.5□□□□□ -0.57
COL17A1-202ENST00000369733 SORL1Q92673 2214 aa11.5□□□□□ -0.57
COL17A1-202ENST00000369733 MUC6Q6W4X9 2439 aa11.5□□□□□ -0.57
COL17A1-202ENST00000369733 WFDC10BQ8IUB3 73 aa11.49□□□□□ -0.57
COL17A1-202ENST00000369733 LINC00482Q8N8I6 264 aa11.49□□□□□ -0.57
COL17A1-202ENST00000369733 M0R378 163 aa11.49□□□□□ -0.57
COL17A1-202ENST00000369733 MIFP14174 115 aa11.49□□□□□ -0.57
COL17A1-202ENST00000369733 SERP1Q9Y6X1 66 aa11.49□□□□□ -0.57
COL17A1-202ENST00000369733 ZNF73O43830 326 aaPredicted RBP11.49□□□□□ -0.57
COL17A1-202ENST00000369733 PRO3102Q9H379 93 aa11.49□□□□□ -0.57
COL17A1-202ENST00000369733 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.48□□□□□ -0.57
COL17A1-202ENST00000369733 B9D2Q9BPU9 175 aa11.48□□□□□ -0.57
COL17A1-202ENST00000369733 RAI1Q7Z5J4 1906 aaPredicted RBP11.48□□□□□ -0.57
COL17A1-202ENST00000369733 IGKV2-28A0A075B6P5 120 aa11.48□□□□□ -0.57
COL17A1-202ENST00000369733 IGKV2D-28P01615 120 aa11.48□□□□□ -0.57
COL17A1-202ENST00000369733 IGKV4-1P06312 121 aa11.48□□□□□ -0.57
COL17A1-202ENST00000369733 TRBV7-7A0A0K0K1E9 115 aa11.48□□□□□ -0.57
COL17A1-202ENST00000369733 PRORYQ9H606 182 aa11.48□□□□□ -0.57
COL17A1-202ENST00000369733 FAM19A1Q7Z5A9 133 aa11.47□□□□□ -0.57
COL17A1-202ENST00000369733 SEC61GP60059 68 aa11.47□□□□□ -0.57
COL17A1-202ENST00000369733 SYCNQ0VAF6 134 aa11.47□□□□□ -0.57
COL17A1-202ENST00000369733 KIF25-AS1Q9Y6Z4 181 aa11.46□□□□□ -0.57
COL17A1-202ENST00000369733 Q6ZSN1 163 aa11.46□□□□□ -0.57
COL17A1-202ENST00000369733 A0A087WZ39 114 aa11.46□□□□□ -0.58
COL17A1-202ENST00000369733 LOC107984640A0A0U1RRK4 108 aa11.46□□□□□ -0.58
COL17A1-202ENST00000369733 C11orf45Q8TAV5 145 aa11.46□□□□□ -0.58
COL17A1-202ENST00000369733 CSDC2Q9Y534 153 aaKnown RBP11.45□□□□□ -0.58
COL17A1-202ENST00000369733 A0A096LNI7 61 aa11.45□□□□□ -0.58
COL17A1-202ENST00000369733 AVPP01185 164 aa11.44□□□□□ -0.58
COL17A1-202ENST00000369733 PRR3P79522 188 aaKnown RBP11.44□□□□□ -0.58
COL17A1-202ENST00000369733 PRR4Q16378 134 aa11.44□□□□□ -0.58
COL17A1-202ENST00000369733 ODF3L2Q3SX64 289 aa11.44□□□□□ -0.58
COL17A1-202ENST00000369733 IGLV4-60A0A075B6I1 120 aa11.44□□□□□ -0.58
COL17A1-202ENST00000369733 FAM30AQ9NZY2 134 aa11.44□□□□□ -0.58
COL17A1-202ENST00000369733 MUC7Q8TAX7 377 aa11.43□□□□□ -0.58
COL17A1-202ENST00000369733 CYSRT1A8MQ03 144 aa11.43□□□□□ -0.58
COL17A1-202ENST00000369733 DHRS4-AS1Q9P1J3 65 aa11.43□□□□□ -0.58
COL17A1-202ENST00000369733 ADAMTS20P59510 1910 aa11.43□□□□□ -0.58
COL17A1-202ENST00000369733 OTOGLQ3ZCN5 2332 aa11.43□□□□□ -0.58
COL17A1-202ENST00000369733 LELP1Q5T871 98 aa11.43□□□□□ -0.58
COL17A1-202ENST00000369733 BRI3O95415 125 aa11.42□□□□□ -0.58
COL17A1-202ENST00000369733 LINC00846Q9NV44 126 aa11.42□□□□□ -0.58
COL17A1-202ENST00000369733 C9orf116Q5BN46 136 aaPredicted RBP11.42□□□□□ -0.58
COL17A1-202ENST00000369733 WFDC13Q8IUB5 93 aa11.42□□□□□ -0.58
COL17A1-202ENST00000369733 AGRNO00468 2067 aa11.42□□□□□ -0.58
COL17A1-202ENST00000369733 PPDPFQ9H3Y8 114 aa11.41□□□□□ -0.58
COL17A1-202ENST00000369733 PTPN13Q12923 2485 aa11.41□□□□□ -0.58
COL17A1-202ENST00000369733 UNQ6190/PRO20217Q6UXQ8 127 aa11.41□□□□□ -0.58
COL17A1-202ENST00000369733 DEFB131BA0A096LNP1 70 aa11.4□□□□□ -0.58
COL17A1-202ENST00000369733 BEAN1Q3B7T3 259 aa11.4□□□□□ -0.58
COL17A1-202ENST00000369733 CELA1Q9UNI1 258 aa11.39□□□□□ -0.59
COL17A1-202ENST00000369733 CUL9Q8IWT3 2517 aa11.39□□□□□ -0.59
COL17A1-202ENST00000369733 ZNF843Q8N446 348 aa11.39□□□□□ -0.59
COL17A1-202ENST00000369733 SOSTDC1Q6X4U4 206 aa11.38□□□□□ -0.59
COL17A1-202ENST00000369733 HIVEP2P31629 2446 aa11.38□□□□□ -0.59
COL17A1-202ENST00000369733 LINC00315P59091 139 aa11.38□□□□□ -0.59
COL17A1-202ENST00000369733 PIEZO2Q9H5I5 2752 aa11.38□□□□□ -0.59
COL17A1-202ENST00000369733 TRBV10-3A0A0K0K1G6 114 aa11.38□□□□□ -0.59
COL17A1-202ENST00000369733 Q8N3U1 123 aa11.38□□□□□ -0.59
COL17A1-202ENST00000369733 LINC01006Q8NI28 216 aa11.38□□□□□ -0.59
COL17A1-202ENST00000369733 LINC00337Q8N6G1 96 aa11.37□□□□□ -0.59
COL17A1-202ENST00000369733 ATRXP46100 2492 aa11.37□□□□□ -0.59
COL17A1-202ENST00000369733 RPL37AP8A6NKH3 93 aa11.36□□□□□ -0.59
COL17A1-202ENST00000369733 C14orf177Q52M58 125 aa11.36□□□□□ -0.59
COL17A1-202ENST00000369733 A0A0J9YWU9 116 aa11.36□□□□□ -0.59
COL17A1-202ENST00000369733 SBSPONQ8IVN8 264 aa11.36□□□□□ -0.59
COL17A1-202ENST00000369733 HILS1P60008 231 aa11.36□□□□□ -0.59
COL17A1-202ENST00000369733 GOLGB1Q14789 3259 aaKnown RBP11.34□□□□□ -0.59
COL17A1-202ENST00000369733 FHL2Q14192 279 aa11.34□□□□□ -0.59
COL17A1-202ENST00000369733 KPRPQ5T749 579 aaPredicted RBP11.34□□□□□ -0.59
COL17A1-202ENST00000369733 LRCOL1A6NCL2 159 aa11.34□□□□□ -0.59
COL17A1-202ENST00000369733 PRYO14603 147 aa11.34□□□□□ -0.59
COL17A1-202ENST00000369733 PRRC2AP48634 2157 aaKnown RBP11.33□□□□□ -0.59
COL17A1-202ENST00000369733 A6NED7 52 aa11.33□□□□□ -0.6
COL17A1-202ENST00000369733 IGLV5-39A0A0G2JS06 123 aa11.33□□□□□ -0.6
COL17A1-202ENST00000369733 A0A1W2PPR1 153 aa11.33□□□□□ -0.6
COL17A1-202ENST00000369733 FAM19A4Q96LR4 140 aa11.32□□□□□ -0.6
COL17A1-202ENST00000369733 Q8N2B8 174 aa11.32□□□□□ -0.6
COL17A1-202ENST00000369733 Q6ZVQ6 151 aa11.31□□□□□ -0.6
COL17A1-202ENST00000369733 KIR2DL5BQ8NHK3 375 aa11.3□□□□□ -0.6
COL17A1-202ENST00000369733 CRYGAP11844 174 aa11.3□□□□□ -0.6
COL17A1-202ENST00000369733 LINC00575Q6W349 94 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms