RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 COL27A1Q8IZC6 1860 aaPredicted RBP8.44□□□□□ -1.06
COPA-202ENST00000368069 LINC00959A0A1B0GUT2 108 aa8.44□□□□□ -1.06
COPA-202ENST00000368069 SMIM1B2RUZ4 78 aa8.44□□□□□ -1.06
COPA-202ENST00000368069 H3BQ85 93 aa8.44□□□□□ -1.06
COPA-202ENST00000368069 LINC00694P0DN24 101 aa8.44□□□□□ -1.06
COPA-202ENST00000368069 COX6A2Q02221 97 aa8.44□□□□□ -1.06
COPA-202ENST00000368069 C1orf158Q8N1D5 194 aa8.44□□□□□ -1.06
COPA-202ENST00000368069 FUSP35637 526 aaKnown RBP eCLIP8.44□□□□□ -1.06
COPA-202ENST00000368069 COX7BP24311 80 aa8.44□□□□□ -1.06
COPA-202ENST00000368069 FN1P02751 2386 aaKnown RBP8.43□□□□□ -1.06
COPA-202ENST00000368069 IGHV4-28A0A0C4DH34 117 aa8.43□□□□□ -1.06
COPA-202ENST00000368069 CDK2AP2O75956 126 aa8.43□□□□□ -1.06
COPA-202ENST00000368069 CCL18P55774 89 aa8.43□□□□□ -1.06
COPA-202ENST00000368069 LINC00315P59091 139 aa8.43□□□□□ -1.06
COPA-202ENST00000368069 LAMA2P24043 3122 aaKnown RBP8.43□□□□□ -1.06
COPA-202ENST00000368069 INAFM1C9JVW0 142 aa8.43□□□□□ -1.06
COPA-202ENST00000368069 SMIM11BQ8TCY0 68 aa8.42□□□□□ -1.06
COPA-202ENST00000368069 FAM19A4Q96LR4 140 aa8.42□□□□□ -1.06
COPA-202ENST00000368069 JMJD1CQ15652 2540 aa8.42□□□□□ -1.06
COPA-202ENST00000368069 NREPQ16612 68 aa8.42□□□□□ -1.06
COPA-202ENST00000368069 C6orf99Q4VX62 202 aa8.41□□□□□ -1.06
COPA-202ENST00000368069 XAGE1AQ9HD64 81 aa8.41□□□□□ -1.06
COPA-202ENST00000368069 HILS1P60008 231 aa8.41□□□□□ -1.06
COPA-202ENST00000368069 BEAN1Q3B7T3 259 aa8.41□□□□□ -1.06
COPA-202ENST00000368069 CD164L2Q6UWJ8 174 aa8.41□□□□□ -1.06
COPA-202ENST00000368069 ZFYVE26Q68DK2 2539 aa8.4□□□□□ -1.06
COPA-202ENST00000368069 TRAV23DV6A0A075B6W5 121 aa8.4□□□□□ -1.06
COPA-202ENST00000368069 ZNF462Q96JM2 2506 aa8.4□□□□□ -1.06
COPA-202ENST00000368069 MIFP14174 115 aa8.4□□□□□ -1.06
COPA-202ENST00000368069 LINC00526Q96FQ7 95 aa8.4□□□□□ -1.06
COPA-202ENST00000368069 MTORP42345 2549 aa8.4□□□□□ -1.07
COPA-202ENST00000368069 PDE6GP18545 87 aa8.39□□□□□ -1.07
COPA-202ENST00000368069 UPK3BQ9BT76 320 aa8.38□□□□□ -1.07
COPA-202ENST00000368069 J3KT08 172 aa8.38□□□□□ -1.07
COPA-202ENST00000368069 UQCRQO14949 82 aa8.38□□□□□ -1.07
COPA-202ENST00000368069 FAM110AQ9BQ89 295 aa8.38□□□□□ -1.07
COPA-202ENST00000368069 PKD1L2Q7Z442 2459 aa8.38□□□□□ -1.07
COPA-202ENST00000368069 UNC80Q8N2C7 3258 aa8.38□□□□□ -1.07
COPA-202ENST00000368069 IGLV4-60A0A075B6I1 120 aa8.38□□□□□ -1.07
COPA-202ENST00000368069 LY6G6DO95868 133 aa8.37□□□□□ -1.07
COPA-202ENST00000368069 IGLV1-51P01701 117 aa8.37□□□□□ -1.07
COPA-202ENST00000368069 C11orf45Q8TAV5 145 aa8.37□□□□□ -1.07
COPA-202ENST00000368069 CSDC2Q9Y534 153 aaKnown RBP8.37□□□□□ -1.07
COPA-202ENST00000368069 Q8IZM0 81 aa8.36□□□□□ -1.07
COPA-202ENST00000368069 CCDC179H3BU77 68 aa8.36□□□□□ -1.07
COPA-202ENST00000368069 DOPEY1Q5JWR5 2465 aa8.35□□□□□ -1.07
COPA-202ENST00000368069 ENHOQ6UWT2 76 aa8.35□□□□□ -1.07
COPA-202ENST00000368069 C3orf22Q8N5N4 141 aa8.35□□□□□ -1.07
COPA-202ENST00000368069 IMUPQ9GZP8 106 aa8.35□□□□□ -1.07
COPA-202ENST00000368069 C11orf72Q8NBR9 251 aa8.35□□□□□ -1.07
COPA-202ENST00000368069 ANKRD17O75179 2603 aaKnown RBP8.34□□□□□ -1.07
COPA-202ENST00000368069 FHL2Q14192 279 aa8.34□□□□□ -1.07
COPA-202ENST00000368069 A0A087WZ39 114 aa8.34□□□□□ -1.07
COPA-202ENST00000368069 FAM240AA0A1B0GVK7 77 aa8.34□□□□□ -1.07
COPA-202ENST00000368069 DEFB131BA0A096LNP1 70 aa8.34□□□□□ -1.07
COPA-202ENST00000368069 KLK9Q2XQG4 91 aa8.34□□□□□ -1.07
COPA-202ENST00000368069 LELP1Q5T871 98 aa8.34□□□□□ -1.07
COPA-202ENST00000368069 CLUHP3Q96NS8 147 aa8.34□□□□□ -1.07
COPA-202ENST00000368069 ATP5EP2Q5VTU8 51 aa8.33□□□□□ -1.08
COPA-202ENST00000368069 KIR2DL5BQ8NHK3 375 aa8.33□□□□□ -1.08
COPA-202ENST00000368069 SMR3AQ99954 134 aa8.33□□□□□ -1.08
COPA-202ENST00000368069 RPL28P46779 137 aaKnown RBP8.33□□□□□ -1.08
COPA-202ENST00000368069 Q6ZQY7 126 aa8.33□□□□□ -1.08
COPA-202ENST00000368069 SCXQ7RTU7 201 aa8.33□□□□□ -1.08
COPA-202ENST00000368069 C20orf197Q8N268 126 aa8.32□□□□□ -1.08
COPA-202ENST00000368069 Q6Q795 121 aa8.32□□□□□ -1.08
COPA-202ENST00000368069 PLA2G2AP14555 144 aa8.32□□□□□ -1.08
COPA-202ENST00000368069 SMCPP49901 116 aaPredicted RBP8.32□□□□□ -1.08
COPA-202ENST00000368069 COX17Q14061 63 aa8.31□□□□□ -1.08
COPA-202ENST00000368069 CDIP1Q9H305 208 aa8.31□□□□□ -1.08
COPA-202ENST00000368069 A0A087WYN8 130 aa8.31□□□□□ -1.08
COPA-202ENST00000368069 Q9UF83 564 aa8.31□□□□□ -1.08
COPA-202ENST00000368069 PRO0461Q9UI25 63 aa8.31□□□□□ -1.08
COPA-202ENST00000368069 C9orf116Q5BN46 136 aaPredicted RBP8.3□□□□□ -1.08
COPA-202ENST00000368069 KPRPQ5T749 579 aaPredicted RBP8.3□□□□□ -1.08
COPA-202ENST00000368069 TMEM258P61165 79 aa8.3□□□□□ -1.08
COPA-202ENST00000368069 UNQ6190/PRO20217Q6UXQ8 127 aa8.3□□□□□ -1.08
COPA-202ENST00000368069 CYSRT1A8MQ03 144 aa8.29□□□□□ -1.08
COPA-202ENST00000368069 USP17L23D6RBM5 183 aa8.29□□□□□ -1.08
COPA-202ENST00000368069 BPY2O14599 106 aa8.29□□□□□ -1.08
COPA-202ENST00000368069 PRR3P79522 188 aaKnown RBP8.29□□□□□ -1.08
COPA-202ENST00000368069 SYCNQ0VAF6 134 aa8.29□□□□□ -1.08
COPA-202ENST00000368069 IGKV2-24A0A0C4DH68 120 aa8.29□□□□□ -1.08
COPA-202ENST00000368069 Q8N2B8 174 aa8.29□□□□□ -1.08
COPA-202ENST00000368069 PRUNE2Q8WUY3 3088 aa8.28□□□□□ -1.08
COPA-202ENST00000368069 M0QXV9 152 aa8.28□□□□□ -1.08
COPA-202ENST00000368069 C16orf95Q9H693 158 aa8.28□□□□□ -1.08
COPA-202ENST00000368069 ACANP16112 2415 aa8.28□□□□□ -1.08
COPA-202ENST00000368069 IGLV5-39A0A0G2JS06 123 aa8.28□□□□□ -1.08
COPA-202ENST00000368069 UBE2AP49459 152 aa8.27□□□□□ -1.09
COPA-202ENST00000368069 NTM-AS1Q6ZSK4 140 aa8.27□□□□□ -1.09
COPA-202ENST00000368069 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.27□□□□□ -1.09
COPA-202ENST00000368069 IGHV4-30-4P0DP06 118 aa8.27□□□□□ -1.09
COPA-202ENST00000368069 CFAP54Q96N23 3096 aa8.27□□□□□ -1.09
COPA-202ENST00000368069 SERP2Q8N6R1 65 aa8.27□□□□□ -1.09
COPA-202ENST00000368069 IGKV2-28A0A075B6P5 120 aa8.26□□□□□ -1.09
COPA-202ENST00000368069 IGKV2D-28P01615 120 aa8.26□□□□□ -1.09
COPA-202ENST00000368069 Q6JHZ5 121 aa8.26□□□□□ -1.09
COPA-202ENST00000368069 M0R378 163 aa8.26□□□□□ -1.09
COPA-202ENST00000368069 CCKP06307 115 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms