RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 NYNRINQ9P2P1 1898 aaKnown RBP2.76□□□□□ -1.97
SYNE1-207ENST00000367255 PROK1P58294 105 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 TRGV1A0A0A0MS02 117 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 CCL19Q99731 98 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 LOC101927531A0A1B0GV80 90 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 LINC00310P59036 64 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 LINC00208Q96KT6 92 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 TMEM105Q8N8V8 129 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 HCFC1P51610 2035 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 UQCR11O14957 56 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 C7orf65Q6ZTY9 151 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 MPLKIPQ8TAP9 179 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 PLXNA2O75051 1894 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 RLFQ13129 1914 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 A0A0J9YWU9 116 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 C11orf71Q6IPW1 123 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 DEFB4AO15263 64 aa2.76□□□□□ -1.97
SYNE1-207ENST00000367255 PRR3P79522 188 aaKnown RBP2.75□□□□□ -1.97
SYNE1-207ENST00000367255 PRR4Q16378 134 aa2.75□□□□□ -1.97
SYNE1-207ENST00000367255 C6orf223Q8N319 242 aa2.75□□□□□ -1.97
SYNE1-207ENST00000367255 ANKRD11Q6UB99 2663 aaPredicted RBP2.75□□□□□ -1.97
SYNE1-207ENST00000367255 CEMP1Q6PRD7 247 aaPredicted RBP2.75□□□□□ -1.97
SYNE1-207ENST00000367255 HILS1P60008 231 aa2.75□□□□□ -1.97
SYNE1-207ENST00000367255 IGHV4-30-4P0DP06 118 aa2.75□□□□□ -1.97
SYNE1-207ENST00000367255 MUC6Q6W4X9 2439 aa2.75□□□□□ -1.97
SYNE1-207ENST00000367255 SPRR3Q9UBC9 169 aa2.75□□□□□ -1.97
SYNE1-207ENST00000367255 THADAQ6YHU6 1953 aa2.75□□□□□ -1.97
SYNE1-207ENST00000367255 IGLV4-3A0A075B6K6 122 aa2.75□□□□□ -1.97
SYNE1-207ENST00000367255 COX6B2Q6YFQ2 88 aa2.75□□□□□ -1.97
SYNE1-207ENST00000367255 PHF5AQ7RTV0 110 aaKnown RBP2.75□□□□□ -1.97
SYNE1-207ENST00000367255 CLPSL2Q6UWE3 100 aa2.75□□□□□ -1.97
SYNE1-207ENST00000367255 G3V318 75 aa2.75□□□□□ -1.97
SYNE1-207ENST00000367255 SETD2Q9BYW2 2564 aaPredicted RBP2.74□□□□□ -1.97
SYNE1-207ENST00000367255 IGLV2-18A0A075B6J9 118 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 C9orf106Q8NAJ2 232 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 PLXNB3Q9ULL4 1909 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.74□□□□□ -1.97
SYNE1-207ENST00000367255 MRPS12O15235 138 aaKnown RBP2.74□□□□□ -1.97
SYNE1-207ENST00000367255 LTBP1Q14766 1721 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 Q8N3U1 123 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 SMCR5Q8TEV8 140 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 PATE2Q6UY27 113 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 DEFB116Q30KQ4 102 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 OVOL3O00110 214 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 ZNF295-AS1Q8N0V1 137 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 UNC79Q9P2D8 2635 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 DEFB131BA0A096LNP1 70 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 ACYP2P14621 99 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 A8MTW9 85 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 LCTP09848 1927 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 A8MZ25 164 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 C5orf56Q8N8D9 126 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 PRAC2D3DTV9 90 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 FREM1Q5H8C1 2179 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 Q6ZSV7 163 aa2.74□□□□□ -1.97
SYNE1-207ENST00000367255 IGHV4-61A0A0C4DH41 118 aa2.73□□□□□ -1.97
SYNE1-207ENST00000367255 MIR7-3HGQ8N6C7 128 aa2.73□□□□□ -1.97
SYNE1-207ENST00000367255 PLA2G2DQ9UNK4 145 aa2.73□□□□□ -1.97
SYNE1-207ENST00000367255 SPAG11BQ08648 103 aa2.73□□□□□ -1.97
SYNE1-207ENST00000367255 ENHOQ6UWT2 76 aa2.73□□□□□ -1.97
SYNE1-207ENST00000367255 CAMK2N2Q96S95 79 aa2.73□□□□□ -1.97
SYNE1-207ENST00000367255 FAM229AH3BQW9 127 aa2.73□□□□□ -1.97
SYNE1-207ENST00000367255 C6orf99Q4VX62 202 aa2.73□□□□□ -1.97
SYNE1-207ENST00000367255 LINC00575Q6W349 94 aa2.73□□□□□ -1.97
SYNE1-207ENST00000367255 IGLV4-69A0A075B6H9 119 aa2.73□□□□□ -1.97
SYNE1-207ENST00000367255 LELP1Q5T871 98 aa2.73□□□□□ -1.97
SYNE1-207ENST00000367255 KIAA0087Q14695 138 aa2.73□□□□□ -1.97
SYNE1-207ENST00000367255 LOC285556D6RIA3 1793 aa2.73□□□□□ -1.97
SYNE1-207ENST00000367255 IGHV4-30-2A0A087WSY4 118 aa2.73□□□□□ -1.97
SYNE1-207ENST00000367255 LINC00846Q9NV44 126 aa2.73□□□□□ -1.97
SYNE1-207ENST00000367255 Q9HAA7 133 aa2.73□□□□□ -1.97
SYNE1-207ENST00000367255 PLA2G2CQ5R387 149 aa2.73□□□□□ -1.97
SYNE1-207ENST00000367255 FSHBP01225 129 aa2.72□□□□□ -1.97
SYNE1-207ENST00000367255 MED12LQ86YW9 2145 aa2.72□□□□□ -1.97
SYNE1-207ENST00000367255 SERTAD4-AS1Q5TG53 156 aa2.72□□□□□ -1.97
SYNE1-207ENST00000367255 FHL3Q13643 280 aa2.72□□□□□ -1.97
SYNE1-207ENST00000367255 K7EQG2 157 aa2.72□□□□□ -1.97
SYNE1-207ENST00000367255 H0Y9J4 135 aa2.72□□□□□ -1.97
SYNE1-207ENST00000367255 DEFB130BP0DP73 79 aa2.72□□□□□ -1.97
SYNE1-207ENST00000367255 DEFB130AP0DP74 79 aa2.72□□□□□ -1.97
SYNE1-207ENST00000367255 RUSC1-AS1Q66K80 236 aa2.72□□□□□ -1.97
SYNE1-207ENST00000367255 CDC42SE2Q9NRR3 84 aa2.72□□□□□ -1.97
SYNE1-207ENST00000367255 CDC42SE1Q9NRR8 79 aa2.72□□□□□ -1.97
SYNE1-207ENST00000367255 IGLV1-40P01703 118 aa2.72□□□□□ -1.97
SYNE1-207ENST00000367255 LINC00167Q96N53 147 aa2.72□□□□□ -1.97
SYNE1-207ENST00000367255 ALPK3Q96L96 1907 aa2.72□□□□□ -1.97
SYNE1-207ENST00000367255 TRAV22A0A0B4J277 110 aa2.72□□□□□ -1.97
SYNE1-207ENST00000367255 PLXNA4Q9HCM2 1894 aa2.72□□□□□ -1.97
SYNE1-207ENST00000367255 TM2D3Q9BRN9 247 aa2.72□□□□□ -1.97
SYNE1-207ENST00000367255 C1orf229Q6ZS94 237 aaPredicted RBP2.71□□□□□ -1.97
SYNE1-207ENST00000367255 Q6ZRP5 223 aa2.71□□□□□ -1.97
SYNE1-207ENST00000367255 TRAV10A0A0B4J240 114 aa2.71□□□□□ -1.98
SYNE1-207ENST00000367255 TSHBP01222 138 aa2.71□□□□□ -1.98
SYNE1-207ENST00000367255 KPRPQ5T749 579 aaPredicted RBP2.71□□□□□ -1.98
SYNE1-207ENST00000367255 KCNQ1DNQ9H478 68 aa2.71□□□□□ -1.98
SYNE1-207ENST00000367255 ZNF106Q9H2Y7 1883 aaKnown RBP2.71□□□□□ -1.98
SYNE1-207ENST00000367255 COL11A2P13942 1736 aaPredicted RBP2.71□□□□□ -1.98
SYNE1-207ENST00000367255 IGHV3OR16-9A0A0B4J2B5 98 aa2.71□□□□□ -1.98
SYNE1-207ENST00000367255 BRD3OSQ6XYD6 125 aa2.71□□□□□ -1.98
SYNE1-207ENST00000367255 LINC00694P0DN24 101 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms