RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 IGF1P05019 195 aa8.31□□□□□ -1.08
CDC42BPA-205ENST00000366769 TRBV6-1A0A0K0K1D8 114 aa8.31□□□□□ -1.08
CDC42BPA-205ENST00000366769 TRBV6-5A0A0K0K1A5 114 aa8.31□□□□□ -1.08
CDC42BPA-205ENST00000366769 E7EUB6 86 aa8.31□□□□□ -1.08
CDC42BPA-205ENST00000366769 RETNLBQ9BQ08 111 aa8.31□□□□□ -1.08
CDC42BPA-205ENST00000366769 LENEPQ9Y5L5 61 aa8.31□□□□□ -1.08
CDC42BPA-205ENST00000366769 NRACQ8N912 160 aa8.3□□□□□ -1.08
CDC42BPA-205ENST00000366769 TRBV7-7A0A0K0K1E9 115 aa8.3□□□□□ -1.08
CDC42BPA-205ENST00000366769 LINC00467Q9BRT7 94 aa8.3□□□□□ -1.08
CDC42BPA-205ENST00000366769 CDKN2A-AS1Q9UH64 79 aa8.3□□□□□ -1.08
CDC42BPA-205ENST00000366769 THSD7BQ9C0I4 1608 aa8.3□□□□□ -1.08
CDC42BPA-205ENST00000366769 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.29□□□□□ -1.08
CDC42BPA-205ENST00000366769 CRIP1P50238 77 aa8.29□□□□□ -1.08
CDC42BPA-205ENST00000366769 PRO0461Q9UI25 63 aa8.29□□□□□ -1.08
CDC42BPA-205ENST00000366769 VPREB1P12018 145 aa8.29□□□□□ -1.08
CDC42BPA-205ENST00000366769 IGHV7-81A0A0B4J1V7 117 aa8.29□□□□□ -1.08
CDC42BPA-205ENST00000366769 CRIP3Q6Q6R5 217 aa8.28□□□□□ -1.08
CDC42BPA-205ENST00000366769 C20orf203Q8NBC4 194 aa8.28□□□□□ -1.08
CDC42BPA-205ENST00000366769 BRWD1-AS2P59051 145 aa8.28□□□□□ -1.08
CDC42BPA-205ENST00000366769 KRTAP27-1Q3LI81 207 aa8.28□□□□□ -1.08
CDC42BPA-205ENST00000366769 LY6G6EA0A0G2JKS1 128 aa8.28□□□□□ -1.08
CDC42BPA-205ENST00000366769 DNAJC9-AS1A6NH13 148 aa8.28□□□□□ -1.08
CDC42BPA-205ENST00000366769 FAM19A4Q96LR4 140 aa8.28□□□□□ -1.08
CDC42BPA-205ENST00000366769 TRBV10-1A0A0K0K1A3 114 aa8.28□□□□□ -1.08
CDC42BPA-205ENST00000366769 KAAG1Q9UBP8 84 aa8.28□□□□□ -1.08
CDC42BPA-205ENST00000366769 REG3AQ06141 175 aa8.28□□□□□ -1.08
CDC42BPA-205ENST00000366769 FAM222AQ5U5X8 452 aa8.27□□□□□ -1.08
CDC42BPA-205ENST00000366769 EBI3Q14213 229 aa8.27□□□□□ -1.09
CDC42BPA-205ENST00000366769 CCKP06307 115 aa8.27□□□□□ -1.09
CDC42BPA-205ENST00000366769 IGKV2-28A0A075B6P5 120 aa8.27□□□□□ -1.09
CDC42BPA-205ENST00000366769 IGKV2D-28P01615 120 aa8.27□□□□□ -1.09
CDC42BPA-205ENST00000366769 CRYGAP11844 174 aa8.27□□□□□ -1.09
CDC42BPA-205ENST00000366769 FHL3Q13643 280 aa8.27□□□□□ -1.09
CDC42BPA-205ENST00000366769 BEAN1Q3B7T3 259 aa8.27□□□□□ -1.09
CDC42BPA-205ENST00000366769 PRO0255Q9UI72 69 aa8.27□□□□□ -1.09
CDC42BPA-205ENST00000366769 DEFB131BA0A096LNP1 70 aa8.26□□□□□ -1.09
CDC42BPA-205ENST00000366769 IGF2-ASQ6U949 168 aa8.26□□□□□ -1.09
CDC42BPA-205ENST00000366769 CHCHD10Q8WYQ3 142 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-205ENST00000366769 A0A087WYN8 130 aa8.26□□□□□ -1.09
CDC42BPA-205ENST00000366769 LINC01548A6NM66 108 aa8.26□□□□□ -1.09
CDC42BPA-205ENST00000366769 SMCPP49901 116 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-205ENST00000366769 C5orf56Q8N8D9 126 aa8.25□□□□□ -1.09
CDC42BPA-205ENST00000366769 IGLV4-3A0A075B6K6 122 aa8.25□□□□□ -1.09
CDC42BPA-205ENST00000366769 ZFAND2AQ8N6M9 145 aa8.25□□□□□ -1.09
CDC42BPA-205ENST00000366769 C17orf82Q86X59 251 aaPredicted RBP8.24□□□□□ -1.09
CDC42BPA-205ENST00000366769 C4orf3Q8WVX3 66 aa8.24□□□□□ -1.09
CDC42BPA-205ENST00000366769 CTSZQ9UBR2 303 aa8.24□□□□□ -1.09
CDC42BPA-205ENST00000366769 ADAMTSL4-AS1Q5T5F5 129 aa8.23□□□□□ -1.09
CDC42BPA-205ENST00000366769 SPINK1P00995 79 aa8.23□□□□□ -1.09
CDC42BPA-205ENST00000366769 RPL37AP8A6NKH3 93 aa8.23□□□□□ -1.09
CDC42BPA-205ENST00000366769 LY6G6CO95867 125 aa8.23□□□□□ -1.09
CDC42BPA-205ENST00000366769 F8WDY8 70 aa8.22□□□□□ -1.09
CDC42BPA-205ENST00000366769 IGLV4-69A0A075B6H9 119 aa8.22□□□□□ -1.09
CDC42BPA-205ENST00000366769 Q6ZTI0 123 aa8.22□□□□□ -1.09
CDC42BPA-205ENST00000366769 TMEM254Q8TBM7 123 aa8.21□□□□□ -1.09
CDC42BPA-205ENST00000366769 RPS28P62857 69 aaKnown RBP8.21□□□□□ -1.09
CDC42BPA-205ENST00000366769 CIRBP-AS1Q8TBR5 109 aa8.21□□□□□ -1.09
CDC42BPA-205ENST00000366769 FAM215AQ9Y5M1 114 aa8.21□□□□□ -1.09
CDC42BPA-205ENST00000366769 IGLV11-55A0A075B6I3 123 aa8.21□□□□□ -1.1
CDC42BPA-205ENST00000366769 IGLV1-44P01699 117 aa8.21□□□□□ -1.1
CDC42BPA-205ENST00000366769 ESRGQ1W209 222 aa8.21□□□□□ -1.1
CDC42BPA-205ENST00000366769 LY6LH3BQJ8 138 aa8.21□□□□□ -1.1
CDC42BPA-205ENST00000366769 TSHBP01222 138 aa8.21□□□□□ -1.1
CDC42BPA-205ENST00000366769 TMEM89A2RUT3 159 aa8.2□□□□□ -1.1
CDC42BPA-205ENST00000366769 A6NDX4 124 aa8.2□□□□□ -1.1
CDC42BPA-205ENST00000366769 C1orf229Q6ZS94 237 aaPredicted RBP8.2□□□□□ -1.1
CDC42BPA-205ENST00000366769 Q8N6K4 173 aa8.2□□□□□ -1.1
CDC42BPA-205ENST00000366769 SMIM11BQ8TCY0 68 aa8.2□□□□□ -1.1
CDC42BPA-205ENST00000366769 Q9UF83 564 aa8.2□□□□□ -1.1
CDC42BPA-205ENST00000366769 A0A096LNJ9 63 aa8.2□□□□□ -1.1
CDC42BPA-205ENST00000366769 PRR9Q5T870 116 aa8.19□□□□□ -1.1
CDC42BPA-205ENST00000366769 ZNF843Q8N446 348 aa8.19□□□□□ -1.1
CDC42BPA-205ENST00000366769 EIF4EBP1Q13541 118 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-205ENST00000366769 SYCNQ0VAF6 134 aa8.19□□□□□ -1.1
CDC42BPA-205ENST00000366769 WFDC10AQ9H1F0 79 aa8.18□□□□□ -1.1
CDC42BPA-205ENST00000366769 GCN1Q92616 2671 aaKnown RBP8.18□□□□□ -1.1
CDC42BPA-205ENST00000366769 PLAC8L1A1L4L8 177 aa8.18□□□□□ -1.1
CDC42BPA-205ENST00000366769 UNQ9165/PRO28630Q6UXU0 137 aa8.18□□□□□ -1.1
CDC42BPA-205ENST00000366769 MDFIQ99750 246 aa8.18□□□□□ -1.1
CDC42BPA-205ENST00000366769 MAP6D1Q9H9H5 199 aa8.18□□□□□ -1.1
CDC42BPA-205ENST00000366769 NHLRC4P0CG21 123 aaPredicted RBP8.18□□□□□ -1.1
CDC42BPA-205ENST00000366769 ZNF706Q9Y5V0 76 aaPredicted RBP8.18□□□□□ -1.1
CDC42BPA-205ENST00000366769 IGFL3Q6UXB1 125 aa8.17□□□□□ -1.1
CDC42BPA-205ENST00000366769 LINC00846Q9NV44 126 aa8.17□□□□□ -1.1
CDC42BPA-205ENST00000366769 C6orf99Q4VX62 202 aa8.17□□□□□ -1.1
CDC42BPA-205ENST00000366769 M0QY20 66 aa8.17□□□□□ -1.1
CDC42BPA-205ENST00000366769 ZNF580Q9UK33 172 aa8.17□□□□□ -1.1
CDC42BPA-205ENST00000366769 NOTCH1P46531 2555 aa8.16□□□□□ -1.1
CDC42BPA-205ENST00000366769 LOC100131303A0A0U1RQF7 123 aa8.16□□□□□ -1.1
CDC42BPA-205ENST00000366769 LINC00336Q6ZUF6 198 aa8.16□□□□□ -1.1
CDC42BPA-205ENST00000366769 Q8N3U1 123 aa8.16□□□□□ -1.1
CDC42BPA-205ENST00000366769 Q6ZQY7 126 aa8.16□□□□□ -1.1
CDC42BPA-205ENST00000366769 C11orf21Q9P2W6 132 aa8.16□□□□□ -1.1
CDC42BPA-205ENST00000366769 A0A0J9YX75 114 aa8.15□□□□□ -1.1
CDC42BPA-205ENST00000366769 ZNF73O43830 326 aaPredicted RBP8.15□□□□□ -1.1
CDC42BPA-205ENST00000366769 K7EMT4 169 aa8.15□□□□□ -1.1
CDC42BPA-205ENST00000366769 SMCR5Q8TEV8 140 aa8.15□□□□□ -1.1
CDC42BPA-205ENST00000366769 HECTD1Q9ULT8 2610 aa8.15□□□□□ -1.1
CDC42BPA-205ENST00000366769 LINC00482Q8N8I6 264 aa8.15□□□□□ -1.11
CDC42BPA-205ENST00000366769 CCDC140Q96MF4 163 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms