RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 NFE4Q86UQ8 179 aa13.9□□□□□ -0.19
SHISA4-201ENST00000362011 CHAC1Q9BUX1 264 aa13.9□□□□□ -0.19
SHISA4-201ENST00000362011 VPS13DQ5THJ4 4388 aa13.89□□□□□ -0.19
SHISA4-201ENST00000362011 PCLOQ9Y6V0 5065 aa13.89□□□□□ -0.19
SHISA4-201ENST00000362011 C11orf86A6NJI1 115 aa13.89□□□□□ -0.19
SHISA4-201ENST00000362011 TTC32Q5I0X7 151 aa13.89□□□□□ -0.19
SHISA4-201ENST00000362011 PYY3Q5JQD4 70 aa13.89□□□□□ -0.19
SHISA4-201ENST00000362011 GEMIN7Q9H840 131 aaKnown RBP13.89□□□□□ -0.19
SHISA4-201ENST00000362011 TRAV8-4A0A0B4J246 113 aa13.88□□□□□ -0.19
SHISA4-201ENST00000362011 HERVK_113P63121 156 aa13.88□□□□□ -0.19
SHISA4-201ENST00000362011 TRAV8-3A0A0A6YYJ7 113 aa13.87□□□□□ -0.19
SHISA4-201ENST00000362011 IGLV10-54A0A075B6I4 117 aa13.86□□□□□ -0.19
SHISA4-201ENST00000362011 NBDYA0A0U1RRE5 68 aa13.86□□□□□ -0.19
SHISA4-201ENST00000362011 COX6A2Q02221 97 aa13.86□□□□□ -0.19
SHISA4-201ENST00000362011 ATOH7Q8N100 152 aa13.86□□□□□ -0.19
SHISA4-201ENST00000362011 CHCHD10Q8WYQ3 142 aaPredicted RBP13.86□□□□□ -0.19
SHISA4-201ENST00000362011 KIAA1109Q2LD37 5005 aa13.86□□□□□ -0.19
SHISA4-201ENST00000362011 Q9HAA7 133 aa13.85□□□□□ -0.19
SHISA4-201ENST00000362011 ZNF22P17026 224 aaPredicted RBP13.84□□□□□ -0.19
SHISA4-201ENST00000362011 XCL1P47992 114 aa13.84□□□□□ -0.19
SHISA4-201ENST00000362011 TMEM170BQ5T4T1 132 aa13.84□□□□□ -0.19
SHISA4-201ENST00000362011 LINC00469Q8N7U9 141 aa13.84□□□□□ -0.19
SHISA4-201ENST00000362011 C1orf43Q9BWL3 253 aa13.84□□□□□ -0.19
SHISA4-201ENST00000362011 KRTAP1-5Q9BYS1 174 aa13.84□□□□□ -0.19
SHISA4-201ENST00000362011 IGLV5-45A0A087WSX0 123 aa13.83□□□□□ -0.2
SHISA4-201ENST00000362011 SMIM6P0DI80 62 aa13.83□□□□□ -0.2
SHISA4-201ENST00000362011 CD164L2Q6UWJ8 174 aa13.83□□□□□ -0.2
SHISA4-201ENST00000362011 RMI2Q96E14 147 aa13.83□□□□□ -0.2
SHISA4-201ENST00000362011 IGKV2D-24A0A075B6R9 120 aa13.82□□□□□ -0.2
SHISA4-201ENST00000362011 DNAH6Q9C0G6 4158 aa13.81□□□□□ -0.2
SHISA4-201ENST00000362011 GAGE12HA6NDE8 117 aa13.81□□□□□ -0.2
SHISA4-201ENST00000362011 CDKN2A-AS1Q9UH64 79 aa13.81□□□□□ -0.2
SHISA4-201ENST00000362011 IGHV3OR16-9A0A0B4J2B5 98 aa13.8□□□□□ -0.2
SHISA4-201ENST00000362011 H3BRM9 83 aa13.8□□□□□ -0.2
SHISA4-201ENST00000362011 FOXI1Q12951 378 aa13.79□□□□□ -0.2
SHISA4-201ENST00000362011 hDV102S1A0JD36 115 aa13.78□□□□□ -0.2
SHISA4-201ENST00000362011 HSBP1L1C9JCN9 74 aa13.78□□□□□ -0.2
SHISA4-201ENST00000362011 HERVK_113P61574 105 aa13.78□□□□□ -0.2
SHISA4-201ENST00000362011 CDPF1Q6NVV7 123 aa13.78□□□□□ -0.2
SHISA4-201ENST00000362011 KRTAP26-1Q6PEX3 210 aa13.78□□□□□ -0.2
SHISA4-201ENST00000362011 C5orf38Q86SI9 138 aa13.78□□□□□ -0.2
SHISA4-201ENST00000362011 TMEM223A0PJW6 202 aa13.77□□□□□ -0.21
SHISA4-201ENST00000362011 M0R2N4 97 aa13.77□□□□□ -0.21
SHISA4-201ENST00000362011 COX7A2LO14548 114 aa13.77□□□□□ -0.21
SHISA4-201ENST00000362011 VAMP8Q9BV40 100 aa13.77□□□□□ -0.21
SHISA4-201ENST00000362011 A0A087WZ39 114 aa13.76□□□□□ -0.21
SHISA4-201ENST00000362011 LINC01561Q8N1V8 128 aa13.76□□□□□ -0.21
SHISA4-201ENST00000362011 STPG4Q8N801 248 aa13.76□□□□□ -0.21
SHISA4-201ENST00000362011 COX11Q9Y6N1 276 aa13.76□□□□□ -0.21
SHISA4-201ENST00000362011 SPINK8P0C7L1 97 aa13.75□□□□□ -0.21
SHISA4-201ENST00000362011 MAJINQ3KP22 176 aa13.75□□□□□ -0.21
SHISA4-201ENST00000362011 TM2D2Q9BX73 214 aa13.75□□□□□ -0.21
SHISA4-201ENST00000362011 Q6ZR54 194 aa13.74□□□□□ -0.21
SHISA4-201ENST00000362011 FAT2Q9NYQ8 4349 aa13.74□□□□□ -0.21
SHISA4-201ENST00000362011 SMIM1B2RUZ4 78 aa13.73□□□□□ -0.21
SHISA4-201ENST00000362011 MALP21145 153 aa13.73□□□□□ -0.21
SHISA4-201ENST00000362011 S100A12P80511 92 aa13.73□□□□□ -0.21
SHISA4-201ENST00000362011 IGHV3-64A0A075B6Q5 118 aa13.72□□□□□ -0.21
SHISA4-201ENST00000362011 E9PLD3 99 aa13.72□□□□□ -0.21
SHISA4-201ENST00000362011 ANKRD39Q53RE8 183 aa13.72□□□□□ -0.21
SHISA4-201ENST00000362011 PAM16Q9Y3D7 125 aa13.72□□□□□ -0.21
SHISA4-201ENST00000362011 RYR1P21817 5038 aa13.72□□□□□ -0.21
SHISA4-201ENST00000362011 APOMO95445 188 aa13.71□□□□□ -0.21
SHISA4-201ENST00000362011 DNAH2Q9P225 4427 aa13.71□□□□□ -0.22
SHISA4-201ENST00000362011 IGHV1-58A0A0C4DH39 117 aa13.7□□□□□ -0.22
SHISA4-201ENST00000362011 LEPROTO15243 131 aa13.7□□□□□ -0.22
SHISA4-201ENST00000362011 SPATA45Q537H7 98 aa13.7□□□□□ -0.22
SHISA4-201ENST00000362011 C12orf57Q99622 126 aa13.7□□□□□ -0.22
SHISA4-201ENST00000362011 IGLV5-39A0A0G2JS06 123 aa13.69□□□□□ -0.22
SHISA4-201ENST00000362011 PSCAO43653 123 aa13.69□□□□□ -0.22
SHISA4-201ENST00000362011 PLEKHB2Q96CS7 222 aa13.69□□□□□ -0.22
SHISA4-201ENST00000362011 LINC00518Q8N0U6 118 aa13.68□□□□□ -0.22
SHISA4-201ENST00000362011 C6orf223Q8N319 242 aa13.68□□□□□ -0.22
SHISA4-201ENST00000362011 ORAOV1Q8WV07 137 aa13.68□□□□□ -0.22
SHISA4-201ENST00000362011 DNAH17Q9UFH2 4485 aa13.67□□□□□ -0.22
SHISA4-201ENST00000362011 IGKV2D-26A0A0A0MRZ7 120 aa13.66□□□□□ -0.22
SHISA4-201ENST00000362011 NMUP48645 174 aa13.66□□□□□ -0.22
SHISA4-201ENST00000362011 TOMM7Q9P0U1 55 aa13.66□□□□□ -0.22
SHISA4-201ENST00000362011 PKHD1P08F94 4074 aa13.66□□□□□ -0.22
SHISA4-201ENST00000362011 A0A1B0GVY2 172 aa13.65□□□□□ -0.22
SHISA4-201ENST00000362011 CFAP161Q6P656 301 aa13.65□□□□□ -0.22
SHISA4-201ENST00000362011 Q6ZRN7 208 aaPredicted RBP13.65□□□□□ -0.22
SHISA4-201ENST00000362011 MAPKAPK5-AS1Q8N8E1 139 aa13.65□□□□□ -0.22
SHISA4-201ENST00000362011 COX7B2Q8TF08 81 aa13.65□□□□□ -0.22
SHISA4-201ENST00000362011 DYNC1H1Q14204 4646 aaKnown RBP13.65□□□□□ -0.22
SHISA4-201ENST00000362011 J3QQQ9 107 aa13.64□□□□□ -0.23
SHISA4-201ENST00000362011 PRSS2P07478 247 aa13.64□□□□□ -0.23
SHISA4-201ENST00000362011 LGALS3P17931 250 aaKnown RBP13.64□□□□□ -0.23
SHISA4-201ENST00000362011 C1orf134Q5TEV5 83 aa13.64□□□□□ -0.23
SHISA4-201ENST00000362011 LINC00336Q6ZUF6 198 aa13.64□□□□□ -0.23
SHISA4-201ENST00000362011 TSPEAR-AS2P59090 65 aa13.64□□□□□ -0.23
SHISA4-201ENST00000362011 Q8IZM0 81 aa13.64□□□□□ -0.23
SHISA4-201ENST00000362011 C15orf56Q8N910 161 aa13.64□□□□□ -0.23
SHISA4-201ENST00000362011 SPAG11BQ08648 103 aa13.63□□□□□ -0.23
SHISA4-201ENST00000362011 DNAH11Q96DT5 4516 aa13.62□□□□□ -0.23
SHISA4-201ENST00000362011 USP17L23D6RBM5 183 aa13.62□□□□□ -0.23
SHISA4-201ENST00000362011 C6orf226Q5I0X4 101 aa13.61□□□□□ -0.23
SHISA4-201ENST00000362011 KIAA0087Q14695 138 aa13.6□□□□□ -0.23
SHISA4-201ENST00000362011 HIGD2BQ4VC39 106 aa13.6□□□□□ -0.23
SHISA4-201ENST00000362011 GVQW2A0A096LPI5 108 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms