RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 MAJINQ3KP22 176 aa12.19□□□□□ -0.46
CCDC7-203ENST00000362006 SPATA45Q537H7 98 aa12.19□□□□□ -0.46
CCDC7-203ENST00000362006 CDKN2A-AS1Q9UH64 79 aa12.18□□□□□ -0.46
CCDC7-203ENST00000362006 TMEM223A0PJW6 202 aa12.17□□□□□ -0.46
CCDC7-203ENST00000362006 IBA57-AS1B1ANH7 110 aa12.17□□□□□ -0.46
CCDC7-203ENST00000362006 CD164L2Q6UWJ8 174 aa12.17□□□□□ -0.46
CCDC7-203ENST00000362006 CHCHD10Q8WYQ3 142 aaPredicted RBP12.17□□□□□ -0.46
CCDC7-203ENST00000362006 IGHV3OR16-9A0A0B4J2B5 98 aa12.17□□□□□ -0.46
CCDC7-203ENST00000362006 TRAV8-3A0A0A6YYJ7 113 aa12.16□□□□□ -0.46
CCDC7-203ENST00000362006 CASC10Q5T4H9 136 aa12.16□□□□□ -0.46
CCDC7-203ENST00000362006 E9PLD3 99 aa12.16□□□□□ -0.46
CCDC7-203ENST00000362006 XCL1P47992 114 aa12.16□□□□□ -0.46
CCDC7-203ENST00000362006 ANKRD39Q53RE8 183 aa12.16□□□□□ -0.46
CCDC7-203ENST00000362006 LINC01561Q8N1V8 128 aa12.16□□□□□ -0.46
CCDC7-203ENST00000362006 CSMD3Q7Z407 3707 aa12.15□□□□□ -0.46
CCDC7-203ENST00000362006 IGLV10-54A0A075B6I4 117 aa12.14□□□□□ -0.47
CCDC7-203ENST00000362006 A0A087WZ39 114 aa12.14□□□□□ -0.47
CCDC7-203ENST00000362006 TTC32Q5I0X7 151 aa12.13□□□□□ -0.47
CCDC7-203ENST00000362006 RMI2Q96E14 147 aa12.13□□□□□ -0.47
CCDC7-203ENST00000362006 IGHV1-58A0A0C4DH39 117 aa12.13□□□□□ -0.47
CCDC7-203ENST00000362006 PLEKHB2Q96CS7 222 aa12.13□□□□□ -0.47
CCDC7-203ENST00000362006 C1orf43Q9BWL3 253 aa12.13□□□□□ -0.47
CCDC7-203ENST00000362006 COX7A2LO14548 114 aa12.12□□□□□ -0.47
CCDC7-203ENST00000362006 LEPROTO15243 131 aa12.12□□□□□ -0.47
CCDC7-203ENST00000362006 GAGE12HA6NDE8 117 aa12.11□□□□□ -0.47
CCDC7-203ENST00000362006 SPINK8P0C7L1 97 aa12.11□□□□□ -0.47
CCDC7-203ENST00000362006 NMUP48645 174 aa12.11□□□□□ -0.47
CCDC7-203ENST00000362006 CTAG1AP78358 180 aa12.11□□□□□ -0.47
CCDC7-203ENST00000362006 FOXI1Q12951 378 aa12.11□□□□□ -0.47
CCDC7-203ENST00000362006 C5orf38Q86SI9 138 aa12.11□□□□□ -0.47
CCDC7-203ENST00000362006 SMIM1B2RUZ4 78 aa12.1□□□□□ -0.47
CCDC7-203ENST00000362006 TSTD3H0UI37 97 aa12.1□□□□□ -0.47
CCDC7-203ENST00000362006 IGKV2D-26A0A0A0MRZ7 120 aa12.1□□□□□ -0.47
CCDC7-203ENST00000362006 IGLV5-39A0A0G2JS06 123 aa12.1□□□□□ -0.47
CCDC7-203ENST00000362006 COX8AP10176 69 aa12.1□□□□□ -0.47
CCDC7-203ENST00000362006 PLECQ15149 4684 aaKnown RBP12.09□□□□□ -0.47
CCDC7-203ENST00000362006 STARD9Q9P2P6 4700 aa12.09□□□□□ -0.47
CCDC7-203ENST00000362006 TENM2Q9NT68 2774 aa12.09□□□□□ -0.47
CCDC7-203ENST00000362006 COX11Q9Y6N1 276 aa12.09□□□□□ -0.47
CCDC7-203ENST00000362006 IGKV2D-24A0A075B6R9 120 aa12.08□□□□□ -0.47
CCDC7-203ENST00000362006 MALP21145 153 aa12.08□□□□□ -0.47
CCDC7-203ENST00000362006 Q9HAA7 133 aa12.08□□□□□ -0.47
CCDC7-203ENST00000362006 NBDYA0A0U1RRE5 68 aa12.08□□□□□ -0.48
CCDC7-203ENST00000362006 J3QQQ9 107 aa12.08□□□□□ -0.48
CCDC7-203ENST00000362006 APOMO95445 188 aa12.08□□□□□ -0.48
CCDC7-203ENST00000362006 LGALS3P17931 250 aaKnown RBP12.08□□□□□ -0.48
CCDC7-203ENST00000362006 C14orf144Q96I85 54 aa12.08□□□□□ -0.48
CCDC7-203ENST00000362006 PRO1933Q9H354 126 aa12.08□□□□□ -0.48
CCDC7-203ENST00000362006 IGHV3-64A0A075B6Q5 118 aa12.07□□□□□ -0.48
CCDC7-203ENST00000362006 KRTAP26-1Q6PEX3 210 aa12.07□□□□□ -0.48
CCDC7-203ENST00000362006 SLC25A34Q6PIV7 304 aa12.07□□□□□ -0.48
CCDC7-203ENST00000362006 DLEU1O43261 78 aa12.07□□□□□ -0.48
CCDC7-203ENST00000362006 UQCR10Q9UDW1 63 aa12.07□□□□□ -0.48
CCDC7-203ENST00000362006 TM2D2Q9BX73 214 aa12.06□□□□□ -0.48
CCDC7-203ENST00000362006 BOD1L2Q8IYS8 172 aa12.05□□□□□ -0.48
CCDC7-203ENST00000362006 PCP2Q8IVA1 136 aa12.05□□□□□ -0.48
CCDC7-203ENST00000362006 MIEN1Q9BRT3 115 aa12.05□□□□□ -0.48
CCDC7-203ENST00000362006 KRTAP1-5Q9BYS1 174 aa12.04□□□□□ -0.48
CCDC7-203ENST00000362006 COX7B2Q8TF08 81 aa12.04□□□□□ -0.48
CCDC7-203ENST00000362006 MYMXA0A1B0GTQ4 84 aa12.03□□□□□ -0.48
CCDC7-203ENST00000362006 LINC00476Q8WZB0 136 aa12.03□□□□□ -0.48
CCDC7-203ENST00000362006 TSPEAR-AS2P59090 65 aa12.02□□□□□ -0.48
CCDC7-203ENST00000362006 ZNF815PA8K554 130 aa12.02□□□□□ -0.49
CCDC7-203ENST00000362006 LY6G6CO95867 125 aa12.02□□□□□ -0.49
CCDC7-203ENST00000362006 PRSS2P07478 247 aa12.02□□□□□ -0.49
CCDC7-203ENST00000362006 CFAP161Q6P656 301 aa12.02□□□□□ -0.49
CCDC7-203ENST00000362006 Q8IZM0 81 aa12.02□□□□□ -0.49
CCDC7-203ENST00000362006 SFTA2Q6UW10 78 aa12.01□□□□□ -0.49
CCDC7-203ENST00000362006 MAPKAPK5-AS1Q8N8E1 139 aa12.01□□□□□ -0.49
CCDC7-203ENST00000362006 ORAOV1Q8WV07 137 aa12.01□□□□□ -0.49
CCDC7-203ENST00000362006 NDUFA12Q9UI09 145 aa12.01□□□□□ -0.49
CCDC7-203ENST00000362006 VPS13DQ5THJ4 4388 aa12.01□□□□□ -0.49
CCDC7-203ENST00000362006 TTTY13Q9BZ97 58 aa12.01□□□□□ -0.49
CCDC7-203ENST00000362006 TOMM7Q9P0U1 55 aa12.01□□□□□ -0.49
CCDC7-203ENST00000362006 C6orf226Q5I0X4 101 aa12□□□□□ -0.49
CCDC7-203ENST00000362006 NDUFA1O15239 70 aa11.99□□□□□ -0.49
CCDC7-203ENST00000362006 CXCL5P42830 114 aa11.98□□□□□ -0.49
CCDC7-203ENST00000362006 HERV-K104P63124 156 aa11.98□□□□□ -0.49
CCDC7-203ENST00000362006 PCP4L1A6NKN8 68 aa11.97□□□□□ -0.49
CCDC7-203ENST00000362006 KIAA0087Q14695 138 aa11.97□□□□□ -0.49
CCDC7-203ENST00000362006 Q6ZR54 194 aa11.97□□□□□ -0.49
CCDC7-203ENST00000362006 SPAG11BQ08648 103 aa11.96□□□□□ -0.49
CCDC7-203ENST00000362006 SCGB1D4Q6XE38 83 aa11.96□□□□□ -0.49
CCDC7-203ENST00000362006 PSCAO43653 123 aa11.96□□□□□ -0.5
CCDC7-203ENST00000362006 DDTP30046 118 aa11.96□□□□□ -0.5
CCDC7-203ENST00000362006 HNRNPA3P51991 378 aaKnown RBP11.96□□□□□ -0.5
CCDC7-203ENST00000362006 CKS1BP61024 79 aa11.96□□□□□ -0.5
CCDC7-203ENST00000362006 ZNF625Q96I27 306 aaPredicted RBP11.96□□□□□ -0.5
CCDC7-203ENST00000362006 HIGD1BQ9P298 99 aa11.96□□□□□ -0.5
CCDC7-203ENST00000362006 DNAH1Q9P2D7 4330 aa11.96□□□□□ -0.5
CCDC7-203ENST00000362006 ZNF561-AS1K7EIQ3 104 aa11.95□□□□□ -0.5
CCDC7-203ENST00000362006 F8WDY8 70 aa11.95□□□□□ -0.5
CCDC7-203ENST00000362006 M0R2N4 97 aa11.95□□□□□ -0.5
CCDC7-203ENST00000362006 C15orf56Q8N910 161 aa11.95□□□□□ -0.5
CCDC7-203ENST00000362006 LYSTQ99698 3801 aa11.94□□□□□ -0.5
CCDC7-203ENST00000362006 GVQW2A0A096LPI5 108 aaPredicted RBP11.93□□□□□ -0.5
CCDC7-203ENST00000362006 A0A0J9YXY3 114 aa11.93□□□□□ -0.5
CCDC7-203ENST00000362006 C2orf91Q6ZV80 131 aa11.93□□□□□ -0.5
CCDC7-203ENST00000362006 TP73-AS1Q9UF72 201 aa11.93□□□□□ -0.5
CCDC7-203ENST00000362006 LINC00587B1AMM8 73 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms