RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 C6orf223Q8N319 242 aa12.42□□□□□ -0.42
COL4A2-201ENST00000360467 MUC22E2RYF6 1773 aaPredicted RBP12.42□□□□□ -0.42
COL4A2-201ENST00000360467 KLLNB2CW77 178 aa12.42□□□□□ -0.42
COL4A2-201ENST00000360467 J3KT08 172 aa12.42□□□□□ -0.42
COL4A2-201ENST00000360467 SNURFQ9Y675 71 aa12.42□□□□□ -0.42
COL4A2-201ENST00000360467 WNK1Q9H4A3 2382 aa12.42□□□□□ -0.42
COL4A2-201ENST00000360467 DHRS4-AS1Q9P1J3 65 aa12.41□□□□□ -0.42
COL4A2-201ENST00000360467 POM121L12Q8N7R1 296 aa12.41□□□□□ -0.42
COL4A2-201ENST00000360467 ODF3L2Q3SX64 289 aa12.41□□□□□ -0.42
COL4A2-201ENST00000360467 ARHGAP32A7KAX9 2087 aa12.4□□□□□ -0.42
COL4A2-201ENST00000360467 NDUFV3P56181 108 aaKnown RBP12.4□□□□□ -0.42
COL4A2-201ENST00000360467 UNQ6190/PRO20217Q6UXQ8 127 aa12.4□□□□□ -0.42
COL4A2-201ENST00000360467 PRR3P79522 188 aaKnown RBP12.39□□□□□ -0.43
COL4A2-201ENST00000360467 A0A1W2PPR1 153 aa12.38□□□□□ -0.43
COL4A2-201ENST00000360467 ZNF73O43830 326 aaPredicted RBP12.38□□□□□ -0.43
COL4A2-201ENST00000360467 EXPH5Q8NEV8 1989 aa12.38□□□□□ -0.43
COL4A2-201ENST00000360467 C10orf25Q5T742 122 aa12.38□□□□□ -0.43
COL4A2-201ENST00000360467 LINC00474Q9P2X8 69 aa12.38□□□□□ -0.43
COL4A2-201ENST00000360467 LINC01556Q5JQF7 62 aa12.37□□□□□ -0.43
COL4A2-201ENST00000360467 COX6A2Q02221 97 aa12.37□□□□□ -0.43
COL4A2-201ENST00000360467 PYGO1Q9Y3Y4 419 aa12.37□□□□□ -0.43
COL4A2-201ENST00000360467 MRPS12O15235 138 aaKnown RBP12.37□□□□□ -0.43
COL4A2-201ENST00000360467 PRRC2AP48634 2157 aaKnown RBP12.37□□□□□ -0.43
COL4A2-201ENST00000360467 CDC42SE2Q9NRR3 84 aa12.36□□□□□ -0.43
COL4A2-201ENST00000360467 C1orf137Q5JT78 98 aa12.36□□□□□ -0.43
COL4A2-201ENST00000360467 PTPN13Q12923 2485 aa12.35□□□□□ -0.43
COL4A2-201ENST00000360467 IGLV4-60A0A075B6I1 120 aa12.34□□□□□ -0.43
COL4A2-201ENST00000360467 X6R8D5 127 aa12.34□□□□□ -0.43
COL4A2-201ENST00000360467 TRBV30A0A0K0K1B3 111 aa12.34□□□□□ -0.43
COL4A2-201ENST00000360467 HCFC1P51610 2035 aa12.33□□□□□ -0.44
COL4A2-201ENST00000360467 REG3GQ6UW15 175 aa12.33□□□□□ -0.44
COL4A2-201ENST00000360467 IGLV1-51P01701 117 aa12.32□□□□□ -0.44
COL4A2-201ENST00000360467 LINC00694P0DN24 101 aa12.32□□□□□ -0.44
COL4A2-201ENST00000360467 LRP4O75096 1905 aa12.32□□□□□ -0.44
COL4A2-201ENST00000360467 PTPRSQ13332 1948 aa12.32□□□□□ -0.44
COL4A2-201ENST00000360467 C1orf134Q5TEV5 83 aa12.32□□□□□ -0.44
COL4A2-201ENST00000360467 K7ERS5 55 aa12.32□□□□□ -0.44
COL4A2-201ENST00000360467 ESRGQ1W209 222 aa12.31□□□□□ -0.44
COL4A2-201ENST00000360467 CUL9Q8IWT3 2517 aa12.31□□□□□ -0.44
COL4A2-201ENST00000360467 RPL28P46779 137 aaKnown RBP12.31□□□□□ -0.44
COL4A2-201ENST00000360467 Q6ZVQ6 151 aa12.31□□□□□ -0.44
COL4A2-201ENST00000360467 FAM236DA0A1B0GTK5 79 aa12.3□□□□□ -0.44
COL4A2-201ENST00000360467 FAM236CP0DP71 79 aa12.3□□□□□ -0.44
COL4A2-201ENST00000360467 Q8IZM0 81 aa12.3□□□□□ -0.44
COL4A2-201ENST00000360467 MRPS36P82909 103 aaKnown RBP12.3□□□□□ -0.44
COL4A2-201ENST00000360467 COX17Q14061 63 aa12.3□□□□□ -0.44
COL4A2-201ENST00000360467 CELA1Q9UNI1 258 aa12.3□□□□□ -0.44
COL4A2-201ENST00000360467 IGHV6-1A0A0B4J1U7 121 aa12.29□□□□□ -0.44
COL4A2-201ENST00000360467 FHL2Q14192 279 aa12.29□□□□□ -0.44
COL4A2-201ENST00000360467 POLR2KP53803 58 aaKnown RBP12.29□□□□□ -0.44
COL4A2-201ENST00000360467 ATG2AQ2TAZ0 1938 aa12.29□□□□□ -0.44
COL4A2-201ENST00000360467 TRBV10-3A0A0K0K1G6 114 aa12.28□□□□□ -0.44
COL4A2-201ENST00000360467 A0A0U1RQV1 116 aa12.27□□□□□ -0.44
COL4A2-201ENST00000360467 DEFB116Q30KQ4 102 aa12.27□□□□□ -0.44
COL4A2-201ENST00000360467 Q6ZSN1 163 aa12.27□□□□□ -0.44
COL4A2-201ENST00000360467 CSPG4Q6UVK1 2322 aa12.27□□□□□ -0.45
COL4A2-201ENST00000360467 C16orf95Q9H693 158 aa12.26□□□□□ -0.45
COL4A2-201ENST00000360467 ADAMTS20P59510 1910 aa12.26□□□□□ -0.45
COL4A2-201ENST00000360467 PRR15LQ9BU68 103 aa12.26□□□□□ -0.45
COL4A2-201ENST00000360467 SERP1Q9Y6X1 66 aa12.26□□□□□ -0.45
COL4A2-201ENST00000360467 LINC00242Q5T6M2 205 aa12.25□□□□□ -0.45
COL4A2-201ENST00000360467 CHCHD7Q9BUK0 85 aa12.25□□□□□ -0.45
COL4A2-201ENST00000360467 SPG11Q96JI7 2443 aa12.25□□□□□ -0.45
COL4A2-201ENST00000360467 HIVEP3Q5T1R4 2406 aa12.25□□□□□ -0.45
COL4A2-201ENST00000360467 TIMM17BO60830 172 aa12.25□□□□□ -0.45
COL4A2-201ENST00000360467 PLXNB1O43157 2135 aa12.24□□□□□ -0.45
COL4A2-201ENST00000360467 Q8N9L7 120 aa12.24□□□□□ -0.45
COL4A2-201ENST00000360467 CPAMD8Q8IZJ3 1885 aa12.23□□□□□ -0.45
COL4A2-201ENST00000360467 ATP5EP2Q5VTU8 51 aa12.22□□□□□ -0.45
COL4A2-201ENST00000360467 ZNF580Q9UK33 172 aa12.22□□□□□ -0.45
COL4A2-201ENST00000360467 A0A087WYN8 130 aa12.22□□□□□ -0.45
COL4A2-201ENST00000360467 FSHBP01225 129 aa12.21□□□□□ -0.45
COL4A2-201ENST00000360467 LYPD5Q6UWN5 251 aa12.21□□□□□ -0.45
COL4A2-201ENST00000360467 C2orf91Q6ZV80 131 aa12.21□□□□□ -0.46
COL4A2-201ENST00000360467 Q9BRP9 147 aa12.2□□□□□ -0.46
COL4A2-201ENST00000360467 NOTCH2Q04721 2471 aa12.2□□□□□ -0.46
COL4A2-201ENST00000360467 FAM19A3Q7Z5A8 133 aa12.2□□□□□ -0.46
COL4A2-201ENST00000360467 LST1O00453 97 aa12.2□□□□□ -0.46
COL4A2-201ENST00000360467 SPINK1P00995 79 aa12.2□□□□□ -0.46
COL4A2-201ENST00000360467 SORL1Q92673 2214 aa12.2□□□□□ -0.46
COL4A2-201ENST00000360467 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.2□□□□□ -0.46
COL4A2-201ENST00000360467 IGIPA6NJ69 53 aa12.19□□□□□ -0.46
COL4A2-201ENST00000360467 SMIM1B2RUZ4 78 aa12.19□□□□□ -0.46
COL4A2-201ENST00000360467 UQCRQO14949 82 aa12.19□□□□□ -0.46
COL4A2-201ENST00000360467 A8MTW9 85 aa12.18□□□□□ -0.46
COL4A2-201ENST00000360467 EGFEM1PQ0D2K5 195 aa12.18□□□□□ -0.46
COL4A2-201ENST00000360467 NDUFC2-KCTD14E9PQ53 114 aa12.18□□□□□ -0.46
COL4A2-201ENST00000360467 ANKHD1Q8IWZ3 2542 aaKnown RBP12.17□□□□□ -0.46
COL4A2-201ENST00000360467 PRLHP81277 87 aa12.17□□□□□ -0.46
COL4A2-201ENST00000360467 TTC28Q96AY4 2481 aa12.17□□□□□ -0.46
COL4A2-201ENST00000360467 MRPL55Q7Z7F7 128 aaKnown RBP12.16□□□□□ -0.46
COL4A2-201ENST00000360467 A6NED7 52 aa12.16□□□□□ -0.46
COL4A2-201ENST00000360467 TSPEAR-AS2P59090 65 aa12.16□□□□□ -0.46
COL4A2-201ENST00000360467 Q8N814 137 aa12.16□□□□□ -0.46
COL4A2-201ENST00000360467 FHL3Q13643 280 aa12.15□□□□□ -0.46
COL4A2-201ENST00000360467 YPEL4Q96NS1 127 aa12.14□□□□□ -0.47
COL4A2-201ENST00000360467 MDFIQ99750 246 aa12.14□□□□□ -0.47
COL4A2-201ENST00000360467 PCOTHQ58A44 107 aa12.14□□□□□ -0.47
COL4A2-201ENST00000360467 SBSPONQ8IVN8 264 aa12.14□□□□□ -0.47
COL4A2-201ENST00000360467 EML5Q05BV3 1969 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms