RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 H3BRM9 83 aa15.75■□□□□ 0.11
SDF4-202ENST00000360001 LEPROTO15243 131 aa15.75■□□□□ 0.11
SDF4-202ENST00000360001 C2orf91Q6ZV80 131 aa15.75■□□□□ 0.11
SDF4-202ENST00000360001 LINC00588Q9Y4M8 146 aa15.75■□□□□ 0.11
SDF4-202ENST00000360001 KLK12Q9UKR0 248 aa15.74■□□□□ 0.11
SDF4-202ENST00000360001 IGHV1-58A0A0C4DH39 117 aa15.73■□□□□ 0.11
SDF4-202ENST00000360001 J3QQQ9 107 aa15.73■□□□□ 0.11
SDF4-202ENST00000360001 SS18Q15532 418 aa15.73■□□□□ 0.11
SDF4-202ENST00000360001 PRR34Q9NV39 138 aa15.73■□□□□ 0.11
SDF4-202ENST00000360001 MRPS16Q9Y3D3 137 aaKnown RBP15.73■□□□□ 0.11
SDF4-202ENST00000360001 CSMD3Q7Z407 3707 aa15.73■□□□□ 0.11
SDF4-202ENST00000360001 IGHV3OR16-9A0A0B4J2B5 98 aa15.73■□□□□ 0.11
SDF4-202ENST00000360001 CCL25O15444 150 aa15.72■□□□□ 0.11
SDF4-202ENST00000360001 CCL18P55774 89 aa15.71■□□□□ 0.11
SDF4-202ENST00000360001 CTAG1AP78358 180 aa15.71■□□□□ 0.11
SDF4-202ENST00000360001 PLEKHB2Q96CS7 222 aa15.71■□□□□ 0.11
SDF4-202ENST00000360001 MYMXA0A1B0GTQ4 84 aa15.71■□□□□ 0.1
SDF4-202ENST00000360001 SMIM1B2RUZ4 78 aa15.71■□□□□ 0.1
SDF4-202ENST00000360001 LINC01556Q5JQF7 62 aa15.71■□□□□ 0.1
SDF4-202ENST00000360001 IGLV5-39A0A0G2JS06 123 aa15.7■□□□□ 0.1
SDF4-202ENST00000360001 XCL1P47992 114 aa15.7■□□□□ 0.1
SDF4-202ENST00000360001 ENHOQ6UWT2 76 aa15.7■□□□□ 0.1
SDF4-202ENST00000360001 APLNQ9ULZ1 77 aa15.7■□□□□ 0.1
SDF4-202ENST00000360001 ZNF815PA8K554 130 aa15.69■□□□□ 0.1
SDF4-202ENST00000360001 SIVA1O15304 175 aa15.69■□□□□ 0.1
SDF4-202ENST00000360001 LGALS3P17931 250 aaKnown RBP15.69■□□□□ 0.1
SDF4-202ENST00000360001 NUPR2A6NF83 97 aa15.68■□□□□ 0.1
SDF4-202ENST00000360001 DNAH10OSP0CZ25 163 aa15.68■□□□□ 0.1
SDF4-202ENST00000360001 IGLV10-54A0A075B6I4 117 aa15.67■□□□□ 0.1
SDF4-202ENST00000360001 CHCHD10Q8WYQ3 142 aaPredicted RBP15.67■□□□□ 0.1
SDF4-202ENST00000360001 A0A087WZ39 114 aa15.67■□□□□ 0.1
SDF4-202ENST00000360001 C5orf38Q86SI9 138 aa15.66■□□□□ 0.1
SDF4-202ENST00000360001 CD164L2Q6UWJ8 174 aa15.66■□□□□ 0.1
SDF4-202ENST00000360001 UBE2WQ96B02 151 aa15.66■□□□□ 0.1
SDF4-202ENST00000360001 UPK3BQ9BT76 320 aa15.66■□□□□ 0.1
SDF4-202ENST00000360001 PLECQ15149 4684 aaKnown RBP15.65■□□□□ 0.1
SDF4-202ENST00000360001 HIGD1BQ9P298 99 aa15.65■□□□□ 0.1
SDF4-202ENST00000360001 CRPP02741 224 aa15.64■□□□□ 0.09
SDF4-202ENST00000360001 KLK5Q9Y337 293 aaPredicted RBP15.64■□□□□ 0.09
SDF4-202ENST00000360001 ZFAND6Q6FIF0 208 aa15.62■□□□□ 0.09
SDF4-202ENST00000360001 FOXI1Q12951 378 aa15.62■□□□□ 0.09
SDF4-202ENST00000360001 STARD9Q9P2P6 4700 aa15.61■□□□□ 0.09
SDF4-202ENST00000360001 NDUFA12Q9UI09 145 aa15.61■□□□□ 0.09
SDF4-202ENST00000360001 TRAV8-4A0A0B4J246 113 aa15.6■□□□□ 0.09
SDF4-202ENST00000360001 MIAQ16674 131 aa15.6■□□□□ 0.09
SDF4-202ENST00000360001 SCGB1D4Q6XE38 83 aa15.6■□□□□ 0.09
SDF4-202ENST00000360001 LINC01561Q8N1V8 128 aa15.6■□□□□ 0.09
SDF4-202ENST00000360001 C10orf126Q8N4M7 172 aa15.6■□□□□ 0.09
SDF4-202ENST00000360001 LYSTQ99698 3801 aa15.6■□□□□ 0.09
SDF4-202ENST00000360001 SNHG12Q9BXW3 62 aa15.6■□□□□ 0.09
SDF4-202ENST00000360001 GAGE12HA6NDE8 117 aa15.59■□□□□ 0.09
SDF4-202ENST00000360001 COX7A2LO14548 114 aa15.58■□□□□ 0.09
SDF4-202ENST00000360001 EREGO14944 169 aa15.58■□□□□ 0.08
SDF4-202ENST00000360001 TENM2Q9NT68 2774 aa15.57■□□□□ 0.08
SDF4-202ENST00000360001 M0R143 59 aa15.57■□□□□ 0.08
SDF4-202ENST00000360001 HINT1P49773 126 aaPredicted RBP15.57■□□□□ 0.08
SDF4-202ENST00000360001 Q9H8V8 135 aa15.57■□□□□ 0.08
SDF4-202ENST00000360001 NDUFA1O15239 70 aa15.56■□□□□ 0.08
SDF4-202ENST00000360001 COX7B2Q8TF08 81 aa15.56■□□□□ 0.08
SDF4-202ENST00000360001 DNAH1Q9P2D7 4330 aa15.56■□□□□ 0.08
SDF4-202ENST00000360001 TGP01266 2768 aa15.56■□□□□ 0.08
SDF4-202ENST00000360001 KRTAP26-1Q6PEX3 210 aa15.56■□□□□ 0.08
SDF4-202ENST00000360001 A0A0J9YXY3 114 aa15.55■□□□□ 0.08
SDF4-202ENST00000360001 HSD52Q0P140 79 aa15.55■□□□□ 0.08
SDF4-202ENST00000360001 TOMM7Q9P0U1 55 aa15.55■□□□□ 0.08
SDF4-202ENST00000360001 UBE2DNLQ8IWF7 75 aa15.54■□□□□ 0.08
SDF4-202ENST00000360001 ZNF625Q96I27 306 aaPredicted RBP15.54■□□□□ 0.08
SDF4-202ENST00000360001 IBA57-AS1B1ANH7 110 aa15.53■□□□□ 0.08
SDF4-202ENST00000360001 BATFQ16520 125 aa15.53■□□□□ 0.08
SDF4-202ENST00000360001 BVES-AS1Q5T3Y7 98 aa15.53■□□□□ 0.08
SDF4-202ENST00000360001 MALP21145 153 aa15.52■□□□□ 0.07
SDF4-202ENST00000360001 C1orf43Q9BWL3 253 aa15.51■□□□□ 0.07
SDF4-202ENST00000360001 Q8IZM0 81 aa15.5■□□□□ 0.07
SDF4-202ENST00000360001 TAL2Q16559 108 aa15.49■□□□□ 0.07
SDF4-202ENST00000360001 ORAOV1Q8WV07 137 aa15.49■□□□□ 0.07
SDF4-202ENST00000360001 HIST1H4GQ99525 98 aa15.49■□□□□ 0.07
SDF4-202ENST00000360001 Q9HAA7 133 aa15.49■□□□□ 0.07
SDF4-202ENST00000360001 SPANXB1Q9NS25 103 aaPredicted RBP15.49■□□□□ 0.07
SDF4-202ENST00000360001 MUC7Q8TAX7 377 aa15.49■□□□□ 0.07
SDF4-202ENST00000360001 LITAFQ99732 161 aa15.49■□□□□ 0.07
SDF4-202ENST00000360001 KIAA0087Q14695 138 aa15.48■□□□□ 0.07
SDF4-202ENST00000360001 VPS13DQ5THJ4 4388 aa15.48■□□□□ 0.07
SDF4-202ENST00000360001 IGKV2D-24A0A075B6R9 120 aa15.47■□□□□ 0.07
SDF4-202ENST00000360001 PRSS2P07478 247 aa15.47■□□□□ 0.07
SDF4-202ENST00000360001 HERV-K104P63124 156 aa15.47■□□□□ 0.07
SDF4-202ENST00000360001 C6orf226Q5I0X4 101 aa15.47■□□□□ 0.07
SDF4-202ENST00000360001 CEND1Q8N111 149 aa15.47■□□□□ 0.07
SDF4-202ENST00000360001 K7EP13 123 aa15.46■□□□□ 0.07
SDF4-202ENST00000360001 GCSHP23434 173 aa15.46■□□□□ 0.07
SDF4-202ENST00000360001 APOMO95445 188 aa15.45■□□□□ 0.06
SDF4-202ENST00000360001 SRSF9Q13242 221 aaKnown RBP eCLIP15.45■□□□□ 0.06
SDF4-202ENST00000360001 TM2D2Q9BX73 214 aa15.45■□□□□ 0.06
SDF4-202ENST00000360001 KRTAP1-5Q9BYS1 174 aa15.45■□□□□ 0.06
SDF4-202ENST00000360001 TMEM238C9JI98 176 aa15.45■□□□□ 0.06
SDF4-202ENST00000360001 TIMM17BO60830 172 aa15.44■□□□□ 0.06
SDF4-202ENST00000360001 ADAMTSL4-AS1Q5T5F5 129 aa15.44■□□□□ 0.06
SDF4-202ENST00000360001 FXYD2P54710 66 aa15.44■□□□□ 0.06
SDF4-202ENST00000360001 WWC2-AS2Q96NR7 200 aa15.44■□□□□ 0.06
SDF4-202ENST00000360001 C2orf82Q6UX34 121 aa15.42■□□□□ 0.06
SDF4-202ENST00000360001 SPAG11BQ08648 103 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms