RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 LINC01006Q8NI28 216 aa10.02□□□□□ -0.81
VCP-201ENST00000358901 CHD7Q9P2D1 2997 aa10.02□□□□□ -0.81
VCP-201ENST00000358901 NDUFA7O95182 113 aa10.01□□□□□ -0.81
VCP-201ENST00000358901 IGLV4-69A0A075B6H9 119 aa10.01□□□□□ -0.81
VCP-201ENST00000358901 MP68P56378 58 aa10.01□□□□□ -0.81
VCP-201ENST00000358901 TSPEAR-AS2P59090 65 aa10.01□□□□□ -0.81
VCP-201ENST00000358901 SCXQ7RTU7 201 aa10.01□□□□□ -0.81
VCP-201ENST00000358901 IGKV2-24A0A0C4DH68 120 aa10□□□□□ -0.81
VCP-201ENST00000358901 BPY2O14599 106 aa10□□□□□ -0.81
VCP-201ENST00000358901 LINC00242Q5T6M2 205 aa10□□□□□ -0.81
VCP-201ENST00000358901 ENHOQ6UWT2 76 aa10□□□□□ -0.81
VCP-201ENST00000358901 COL5A1P20908 1838 aaPredicted RBP10□□□□□ -0.81
VCP-201ENST00000358901 FAM110AQ9BQ89 295 aa10□□□□□ -0.81
VCP-201ENST00000358901 IGLV2-18A0A075B6J9 118 aa10□□□□□ -0.81
VCP-201ENST00000358901 NDUFB1O75438 58 aa9.99□□□□□ -0.81
VCP-201ENST00000358901 UBE2AP49459 152 aa9.99□□□□□ -0.81
VCP-201ENST00000358901 ODF3L2Q3SX64 289 aa9.99□□□□□ -0.81
VCP-201ENST00000358901 C11orf45Q8TAV5 145 aa9.99□□□□□ -0.81
VCP-201ENST00000358901 CDC42SE2Q9NRR3 84 aa9.99□□□□□ -0.81
VCP-201ENST00000358901 ADAMTS20P59510 1910 aa9.99□□□□□ -0.81
VCP-201ENST00000358901 LINC00959A0A1B0GUT2 108 aa9.98□□□□□ -0.81
VCP-201ENST00000358901 WFDC9Q8NEX5 89 aa9.98□□□□□ -0.81
VCP-201ENST00000358901 SMIM11BQ8TCY0 68 aa9.98□□□□□ -0.81
VCP-201ENST00000358901 ZNF580Q9UK33 172 aa9.98□□□□□ -0.81
VCP-201ENST00000358901 CRIP2P52943 208 aaPredicted RBP9.98□□□□□ -0.81
VCP-201ENST00000358901 C5orf47Q569G3 176 aa9.98□□□□□ -0.81
VCP-201ENST00000358901 HIGD2AQ9BW72 106 aa9.98□□□□□ -0.81
VCP-201ENST00000358901 INAFM1C9JVW0 142 aa9.97□□□□□ -0.81
VCP-201ENST00000358901 UBE2D3P61077 147 aa9.97□□□□□ -0.81
VCP-201ENST00000358901 UBE2D2P62837 147 aa9.97□□□□□ -0.81
VCP-201ENST00000358901 CD164L2Q6UWJ8 174 aa9.97□□□□□ -0.81
VCP-201ENST00000358901 Q6ZQY7 126 aa9.97□□□□□ -0.81
VCP-201ENST00000358901 MUC4Q99102 2169 aa9.97□□□□□ -0.81
VCP-201ENST00000358901 RAI1Q7Z5J4 1906 aaPredicted RBP9.96□□□□□ -0.82
VCP-201ENST00000358901 C3orf22Q8N5N4 141 aa9.96□□□□□ -0.82
VCP-201ENST00000358901 DEFB131BA0A096LNP1 70 aa9.95□□□□□ -0.82
VCP-201ENST00000358901 MIFP14174 115 aa9.95□□□□□ -0.82
VCP-201ENST00000358901 ANKRD17O75179 2603 aaKnown RBP9.94□□□□□ -0.82
VCP-201ENST00000358901 ZNF843Q8N446 348 aa9.94□□□□□ -0.82
VCP-201ENST00000358901 SMIM1B2RUZ4 78 aa9.94□□□□□ -0.82
VCP-201ENST00000358901 USP17L23D6RBM5 183 aa9.94□□□□□ -0.82
VCP-201ENST00000358901 CCDC179H3BU77 68 aa9.94□□□□□ -0.82
VCP-201ENST00000358901 ATP5EP2Q5VTU8 51 aa9.94□□□□□ -0.82
VCP-201ENST00000358901 IMUPQ9GZP8 106 aa9.94□□□□□ -0.82
VCP-201ENST00000358901 A0A096LNI7 61 aa9.93□□□□□ -0.82
VCP-201ENST00000358901 ADAMTSL4-AS1Q5T5F5 129 aa9.93□□□□□ -0.82
VCP-201ENST00000358901 PRUNE2Q8WUY3 3088 aa9.93□□□□□ -0.82
VCP-201ENST00000358901 LINC00694P0DN24 101 aa9.93□□□□□ -0.82
VCP-201ENST00000358901 CCKP06307 115 aa9.92□□□□□ -0.82
VCP-201ENST00000358901 CHCHD7Q9BUK0 85 aa9.92□□□□□ -0.82
VCP-201ENST00000358901 PKIGQ9Y2B9 76 aa9.92□□□□□ -0.82
VCP-201ENST00000358901 KRTAP10-9P60411 292 aa9.91□□□□□ -0.82
VCP-201ENST00000358901 SYCNQ0VAF6 134 aa9.91□□□□□ -0.82
VCP-201ENST00000358901 UNC80Q8N2C7 3258 aa9.91□□□□□ -0.82
VCP-201ENST00000358901 COX6A2Q02221 97 aa9.91□□□□□ -0.82
VCP-201ENST00000358901 C1orf158Q8N1D5 194 aa9.91□□□□□ -0.82
VCP-201ENST00000358901 H0Y9J4 135 aa9.9□□□□□ -0.82
VCP-201ENST00000358901 AMELXQ99217 191 aa9.9□□□□□ -0.82
VCP-201ENST00000358901 IGKV2-28A0A075B6P5 120 aa9.89□□□□□ -0.83
VCP-201ENST00000358901 IGKV2D-28P01615 120 aa9.89□□□□□ -0.83
VCP-201ENST00000358901 SERP2Q8N6R1 65 aa9.89□□□□□ -0.83
VCP-201ENST00000358901 F8P00451 2351 aa9.89□□□□□ -0.83
VCP-201ENST00000358901 C3orf84H3BNL1 204 aa9.89□□□□□ -0.83
VCP-201ENST00000358901 FAM236DA0A1B0GTK5 79 aa9.88□□□□□ -0.83
VCP-201ENST00000358901 FAM236CP0DP71 79 aa9.88□□□□□ -0.83
VCP-201ENST00000358901 Q6ZSN1 163 aa9.88□□□□□ -0.83
VCP-201ENST00000358901 PTPRBP23467 1997 aa9.88□□□□□ -0.83
VCP-201ENST00000358901 IGLV4-60A0A075B6I1 120 aa9.88□□□□□ -0.83
VCP-201ENST00000358901 BRI3O95415 125 aa9.88□□□□□ -0.83
VCP-201ENST00000358901 FLNBO75369 2602 aaKnown RBP9.88□□□□□ -0.83
VCP-201ENST00000358901 Q8IZM0 81 aa9.88□□□□□ -0.83
VCP-201ENST00000358901 CLUHP3Q96NS8 147 aa9.88□□□□□ -0.83
VCP-201ENST00000358901 KPRPQ5T749 579 aaPredicted RBP9.87□□□□□ -0.83
VCP-201ENST00000358901 LELP1Q5T871 98 aa9.87□□□□□ -0.83
VCP-201ENST00000358901 HILS1P60008 231 aa9.87□□□□□ -0.83
VCP-201ENST00000358901 USP24Q9UPU5 2620 aa9.87□□□□□ -0.83
VCP-201ENST00000358901 FAM240AA0A1B0GVK7 77 aa9.86□□□□□ -0.83
VCP-201ENST00000358901 KIF25-AS1Q9Y6Z4 181 aa9.86□□□□□ -0.83
VCP-201ENST00000358901 CYSRT1A8MQ03 144 aa9.86□□□□□ -0.83
VCP-201ENST00000358901 FAM19A5Q7Z5A7 132 aaPredicted RBP9.86□□□□□ -0.83
VCP-201ENST00000358901 FAM19A1Q7Z5A9 133 aa9.86□□□□□ -0.83
VCP-201ENST00000358901 COX7CP15954 63 aa9.86□□□□□ -0.83
VCP-201ENST00000358901 UNQ6190/PRO20217Q6UXQ8 127 aa9.86□□□□□ -0.83
VCP-201ENST00000358901 LY6G6DO95868 133 aa9.85□□□□□ -0.83
VCP-201ENST00000358901 C9orf116Q5BN46 136 aaPredicted RBP9.85□□□□□ -0.83
VCP-201ENST00000358901 PRR3P79522 188 aaKnown RBP9.85□□□□□ -0.83
VCP-201ENST00000358901 A0A087WZ39 114 aa9.84□□□□□ -0.83
VCP-201ENST00000358901 BRK1Q8WUW1 75 aa9.84□□□□□ -0.83
VCP-201ENST00000358901 NDUFC2O95298 119 aa9.84□□□□□ -0.83
VCP-201ENST00000358901 RPL28P46779 137 aaKnown RBP9.84□□□□□ -0.83
VCP-201ENST00000358901 KIR2DL5BQ8NHK3 375 aa9.84□□□□□ -0.83
VCP-201ENST00000358901 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.83□□□□□ -0.84
VCP-201ENST00000358901 Q6Q795 121 aa9.83□□□□□ -0.84
VCP-201ENST00000358901 MPLKIPQ8TAP9 179 aa9.83□□□□□ -0.84
VCP-201ENST00000358901 SNURFQ9Y675 71 aa9.83□□□□□ -0.84
VCP-201ENST00000358901 M0R378 163 aa9.83□□□□□ -0.84
VCP-201ENST00000358901 ZNF73O43830 326 aaPredicted RBP9.83□□□□□ -0.84
VCP-201ENST00000358901 IGLV1-51P01701 117 aa9.83□□□□□ -0.84
VCP-201ENST00000358901 CSDC2Q9Y534 153 aaKnown RBP9.83□□□□□ -0.84
VCP-201ENST00000358901 BEAN1Q3B7T3 259 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 771.9 ms