RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 C20orf203Q8NBC4 194 aa7.23□□□□□ -1.25
CHD3-202ENST00000358181 FAM208BQ5VWN6 2430 aa7.23□□□□□ -1.25
CHD3-202ENST00000358181 NUP210LQ5VU65 1888 aa7.23□□□□□ -1.25
CHD3-202ENST00000358181 PRORYQ9H606 182 aa7.23□□□□□ -1.25
CHD3-202ENST00000358181 hDV103S1A0JD37 113 aa7.22□□□□□ -1.25
CHD3-202ENST00000358181 IGLV3-1P01715 115 aa7.22□□□□□ -1.25
CHD3-202ENST00000358181 OTOGLQ3ZCN5 2332 aa7.22□□□□□ -1.25
CHD3-202ENST00000358181 IGFL2Q6UWQ7 119 aa7.22□□□□□ -1.25
CHD3-202ENST00000358181 LIMD2Q9BT23 127 aa7.22□□□□□ -1.25
CHD3-202ENST00000358181 LINC00308Q8TCZ7 52 aa7.21□□□□□ -1.25
CHD3-202ENST00000358181 TNFRSF13BO14836 293 aaPredicted RBP7.21□□□□□ -1.26
CHD3-202ENST00000358181 BDP1A6H8Y1 2624 aa7.21□□□□□ -1.26
CHD3-202ENST00000358181 HCG22E2RYF7 251 aa7.21□□□□□ -1.26
CHD3-202ENST00000358181 C9orf116Q5BN46 136 aaPredicted RBP7.21□□□□□ -1.26
CHD3-202ENST00000358181 UTRNP46939 3433 aa7.2□□□□□ -1.26
CHD3-202ENST00000358181 LRRC75A-AS1Q8N1F1 130 aa7.2□□□□□ -1.26
CHD3-202ENST00000358181 LELP1Q5T871 98 aa7.2□□□□□ -1.26
CHD3-202ENST00000358181 H0Y9P7 68 aa7.2□□□□□ -1.26
CHD3-202ENST00000358181 UQCRQO14949 82 aa7.2□□□□□ -1.26
CHD3-202ENST00000358181 HCFC1P51610 2035 aa7.2□□□□□ -1.26
CHD3-202ENST00000358181 H7C423 109 aa7.19□□□□□ -1.26
CHD3-202ENST00000358181 WNK1Q9H4A3 2382 aa7.19□□□□□ -1.26
CHD3-202ENST00000358181 CCDC140Q96MF4 163 aa7.19□□□□□ -1.26
CHD3-202ENST00000358181 IBA57-AS1B1ANH7 110 aa7.18□□□□□ -1.26
CHD3-202ENST00000358181 COL4A4P53420 1690 aaPredicted RBP7.18□□□□□ -1.26
CHD3-202ENST00000358181 PRR14LQ5THK1 2151 aa7.18□□□□□ -1.26
CHD3-202ENST00000358181 CREBBPQ92793 2442 aa7.18□□□□□ -1.26
CHD3-202ENST00000358181 SMIM11BQ8TCY0 68 aa7.18□□□□□ -1.26
CHD3-202ENST00000358181 CD164L2Q6UWJ8 174 aa7.17□□□□□ -1.26
CHD3-202ENST00000358181 APLNQ9ULZ1 77 aa7.17□□□□□ -1.26
CHD3-202ENST00000358181 COX6A2Q02221 97 aa7.17□□□□□ -1.26
CHD3-202ENST00000358181 LINC00959A0A1B0GUT2 108 aa7.17□□□□□ -1.26
CHD3-202ENST00000358181 DSCAMO60469 2012 aa7.17□□□□□ -1.26
CHD3-202ENST00000358181 C16orf90A8MZG2 172 aa7.16□□□□□ -1.26
CHD3-202ENST00000358181 CYSRT1A8MQ03 144 aa7.16□□□□□ -1.26
CHD3-202ENST00000358181 TRIAP1O43715 76 aa7.16□□□□□ -1.26
CHD3-202ENST00000358181 PRR3P79522 188 aaKnown RBP7.15□□□□□ -1.26
CHD3-202ENST00000358181 NDUFA7O95182 113 aa7.15□□□□□ -1.26
CHD3-202ENST00000358181 EML5Q05BV3 1969 aa7.15□□□□□ -1.26
CHD3-202ENST00000358181 ARHGAP32A7KAX9 2087 aa7.15□□□□□ -1.26
CHD3-202ENST00000358181 LINC01006Q8NI28 216 aa7.15□□□□□ -1.27
CHD3-202ENST00000358181 CCDC179H3BU77 68 aa7.15□□□□□ -1.27
CHD3-202ENST00000358181 ZNF80P51504 273 aaPredicted RBP7.15□□□□□ -1.27
CHD3-202ENST00000358181 Q6ZTC4 211 aa7.15□□□□□ -1.27
CHD3-202ENST00000358181 IGLV4-3A0A075B6K6 122 aa7.15□□□□□ -1.27
CHD3-202ENST00000358181 CHTF8P0CG12 524 aa7.15□□□□□ -1.27
CHD3-202ENST00000358181 ATP5EP56381 51 aaPredicted RBP7.15□□□□□ -1.27
CHD3-202ENST00000358181 SPAG11AQ6PDA7 123 aa7.15□□□□□ -1.27
CHD3-202ENST00000358181 KRTAP27-1Q3LI81 207 aa7.14□□□□□ -1.27
CHD3-202ENST00000358181 SSBP3-AS1Q7Z2R9 100 aa7.14□□□□□ -1.27
CHD3-202ENST00000358181 A0A1B0GU69 56 aa7.14□□□□□ -1.27
CHD3-202ENST00000358181 SPRY4Q9C004 299 aa7.14□□□□□ -1.27
CHD3-202ENST00000358181 ALPK3Q96L96 1907 aa7.14□□□□□ -1.27
CHD3-202ENST00000358181 ODF3BA8MYP8 253 aa7.14□□□□□ -1.27
CHD3-202ENST00000358181 C1orf229Q6ZS94 237 aaPredicted RBP7.14□□□□□ -1.27
CHD3-202ENST00000358181 ZNF702PQ9H963 129 aa7.14□□□□□ -1.27
CHD3-202ENST00000358181 A0A087WSZ3 146 aa7.13□□□□□ -1.27
CHD3-202ENST00000358181 TRBV6-4A0A1B0GX49 114 aa7.13□□□□□ -1.27
CHD3-202ENST00000358181 ATP5EP2Q5VTU8 51 aa7.13□□□□□ -1.27
CHD3-202ENST00000358181 LINC00694P0DN24 101 aa7.13□□□□□ -1.27
CHD3-202ENST00000358181 LINC00575Q6W349 94 aa7.13□□□□□ -1.27
CHD3-202ENST00000358181 MRPS36P82909 103 aaKnown RBP7.13□□□□□ -1.27
CHD3-202ENST00000358181 UNQ6190/PRO20217Q6UXQ8 127 aa7.12□□□□□ -1.27
CHD3-202ENST00000358181 NDUFC1O43677 76 aa7.12□□□□□ -1.27
CHD3-202ENST00000358181 CUL9Q8IWT3 2517 aa7.12□□□□□ -1.27
CHD3-202ENST00000358181 PTPN13Q12923 2485 aa7.12□□□□□ -1.27
CHD3-202ENST00000358181 MRPS12O15235 138 aaKnown RBP7.11□□□□□ -1.27
CHD3-202ENST00000358181 MOBPQ13875 183 aa7.11□□□□□ -1.27
CHD3-202ENST00000358181 ATP11AUNQ6ZP68 121 aa7.11□□□□□ -1.27
CHD3-202ENST00000358181 LINC01554Q52M75 96 aa7.11□□□□□ -1.27
CHD3-202ENST00000358181 FAM167A-AS1Q96KT0 104 aa7.11□□□□□ -1.27
CHD3-202ENST00000358181 ZNF22P17026 224 aaPredicted RBP7.1□□□□□ -1.27
CHD3-202ENST00000358181 CDSNQ15517 529 aa7.1□□□□□ -1.27
CHD3-202ENST00000358181 K7EQG2 157 aa7.1□□□□□ -1.27
CHD3-202ENST00000358181 LTBP2Q14767 1821 aa7.1□□□□□ -1.27
CHD3-202ENST00000358181 TRBV10-3A0A0K0K1G6 114 aa7.1□□□□□ -1.27
CHD3-202ENST00000358181 IGLV1-47P01700 117 aa7.1□□□□□ -1.27
CHD3-202ENST00000358181 TYMSOSQ8TAI1 123 aa7.1□□□□□ -1.27
CHD3-202ENST00000358181 Q96NJ1 140 aa7.1□□□□□ -1.27
CHD3-202ENST00000358181 TRBV7-7A0A0K0K1E9 115 aa7.09□□□□□ -1.27
CHD3-202ENST00000358181 LMO4P61968 165 aa7.09□□□□□ -1.27
CHD3-202ENST00000358181 Q6ZS46 218 aa7.09□□□□□ -1.27
CHD3-202ENST00000358181 HIGD1BQ9P298 99 aa7.09□□□□□ -1.27
CHD3-202ENST00000358181 EDN2P20800 178 aa7.08□□□□□ -1.28
CHD3-202ENST00000358181 SPG11Q96JI7 2443 aa7.08□□□□□ -1.28
CHD3-202ENST00000358181 MRGPRG-AS1Q2M3A8 158 aa7.08□□□□□ -1.28
CHD3-202ENST00000358181 MUC4Q99102 2169 aa7.07□□□□□ -1.28
CHD3-202ENST00000358181 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.07□□□□□ -1.28
CHD3-202ENST00000358181 CSPG4Q6UVK1 2322 aa7.06□□□□□ -1.28
CHD3-202ENST00000358181 M0QY20 66 aa7.06□□□□□ -1.28
CHD3-202ENST00000358181 RNF185Q96GF1 192 aa7.06□□□□□ -1.28
CHD3-202ENST00000358181 VPREB1P12018 145 aa7.06□□□□□ -1.28
CHD3-202ENST00000358181 TET2Q6N021 2002 aaPredicted RBP7.06□□□□□ -1.28
CHD3-202ENST00000358181 Q6ZPA2 131 aa7.05□□□□□ -1.28
CHD3-202ENST00000358181 COX17Q14061 63 aa7.05□□□□□ -1.28
CHD3-202ENST00000358181 C1orf64Q8NEQ6 169 aa7.05□□□□□ -1.28
CHD3-202ENST00000358181 HIVEP2P31629 2446 aa7.05□□□□□ -1.28
CHD3-202ENST00000358181 RAI1Q7Z5J4 1906 aaPredicted RBP7.05□□□□□ -1.28
CHD3-202ENST00000358181 C9orf92A6NGG3 77 aa7.05□□□□□ -1.28
CHD3-202ENST00000358181 EXPH5Q8NEV8 1989 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 173.2 ms