RNA–Protein interactions for RNA: ENST00000357171.7

SHANK2-202, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 1,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-202ENST00000357171 SPACA4Q8TDM5 124 aa8.64□□□□□ -1.03
SHANK2-202ENST00000357171 TMEM141Q96I45 108 aa8.64□□□□□ -1.03
SHANK2-202ENST00000357171 CYSLTR1Q9Y271 337 aa8.64□□□□□ -1.03
SHANK2-202ENST00000357171 FAT3Q8TDW7 4589 aa8.63□□□□□ -1.03
SHANK2-202ENST00000357171 APOC3P02656 99 aa8.63□□□□□ -1.03
SHANK2-202ENST00000357171 PLA2G1BP04054 148 aaKnown RBP8.63□□□□□ -1.03
SHANK2-202ENST00000357171 COX6A2Q02221 97 aa8.63□□□□□ -1.03
SHANK2-202ENST00000357171 SVBPQ8N300 66 aa8.63□□□□□ -1.03
SHANK2-202ENST00000357171 LINC00526Q96FQ7 95 aa8.63□□□□□ -1.03
SHANK2-202ENST00000357171 AMELXQ99217 191 aa8.63□□□□□ -1.03
SHANK2-202ENST00000357171 LRP1Q07954 4544 aaKnown RBP8.63□□□□□ -1.03
SHANK2-202ENST00000357171 HERC1Q15751 4861 aa8.63□□□□□ -1.03
SHANK2-202ENST00000357171 IFITM10A6NMD0 228 aa8.62□□□□□ -1.03
SHANK2-202ENST00000357171 SNAPINO95295 136 aa8.62□□□□□ -1.03
SHANK2-202ENST00000357171 MALP21145 153 aa8.62□□□□□ -1.03
SHANK2-202ENST00000357171 LINC00242Q5T6M2 205 aa8.62□□□□□ -1.03
SHANK2-202ENST00000357171 LINC00173Q6ZV60 143 aa8.62□□□□□ -1.03
SHANK2-202ENST00000357171 C5orf38Q86SI9 138 aa8.62□□□□□ -1.03
SHANK2-202ENST00000357171 PRSS3P2Q8NHM4 247 aa8.62□□□□□ -1.03
SHANK2-202ENST00000357171 IGLV4-69A0A075B6H9 119 aa8.61□□□□□ -1.03
SHANK2-202ENST00000357171 ZNF561-AS1K7EIQ3 104 aa8.61□□□□□ -1.03
SHANK2-202ENST00000357171 CHTF8P0CG12 524 aa8.61□□□□□ -1.03
SHANK2-202ENST00000357171 G0S2P27469 103 aa8.61□□□□□ -1.03
SHANK2-202ENST00000357171 SYCNQ0VAF6 134 aa8.61□□□□□ -1.03
SHANK2-202ENST00000357171 FAM19A3Q7Z5A8 133 aa8.61□□□□□ -1.03
SHANK2-202ENST00000357171 C2orf48Q96LS8 159 aa8.61□□□□□ -1.03
SHANK2-202ENST00000357171 CARD19Q96LW7 228 aa8.61□□□□□ -1.03
SHANK2-202ENST00000357171 MRPL18Q9H0U6 180 aaKnown RBP8.61□□□□□ -1.03
SHANK2-202ENST00000357171 PLAC8Q9NZF1 115 aa8.61□□□□□ -1.03
SHANK2-202ENST00000357171 A0A087WYN8 130 aa8.61□□□□□ -1.03
SHANK2-202ENST00000357171 APOMO95445 188 aa8.61□□□□□ -1.03
SHANK2-202ENST00000357171 UBE2D1P51668 147 aa8.61□□□□□ -1.03
SHANK2-202ENST00000357171 NDUFA5Q16718 116 aa8.61□□□□□ -1.03
SHANK2-202ENST00000357171 TEX43Q6ZNM6 134 aa8.61□□□□□ -1.03
SHANK2-202ENST00000357171 OR10D4PQ8NGN7 298 aa8.61□□□□□ -1.03
SHANK2-202ENST00000357171 TOMM6Q96B49 74 aa8.61□□□□□ -1.03
SHANK2-202ENST00000357171 TIMM17AQ99595 171 aa8.61□□□□□ -1.03
SHANK2-202ENST00000357171 A0A087WZ39 114 aa8.6□□□□□ -1.03
SHANK2-202ENST00000357171 TGIF2-C20orf24A0A0A6YYL0 155 aa8.6□□□□□ -1.03
SHANK2-202ENST00000357171 YPEL4Q96NS1 127 aa8.6□□□□□ -1.03
SHANK2-202ENST00000357171 FABP9Q0Z7S8 132 aa8.59□□□□□ -1.03
SHANK2-202ENST00000357171 Q6ZRU5 148 aa8.59□□□□□ -1.03
SHANK2-202ENST00000357171 VCX2Q9H322 139 aa8.59□□□□□ -1.03
SHANK2-202ENST00000357171 PKIGQ9Y2B9 76 aa8.59□□□□□ -1.03
SHANK2-202ENST00000357171 DMBT1Q9UGM3 2413 aaPredicted RBP8.59□□□□□ -1.04
SHANK2-202ENST00000357171 A0A096LNI7 61 aa8.58□□□□□ -1.04
SHANK2-202ENST00000357171 LINC01549A6NIU2 74 aa8.58□□□□□ -1.04
SHANK2-202ENST00000357171 F8WDY8 70 aa8.58□□□□□ -1.04
SHANK2-202ENST00000357171 RNF151Q2KHN1 245 aa8.58□□□□□ -1.04
SHANK2-202ENST00000357171 ZC2HC1BQ5TFG8 222 aa8.58□□□□□ -1.04
SHANK2-202ENST00000357171 Q6ZN92 141 aa8.58□□□□□ -1.04
SHANK2-202ENST00000357171 ERASQ7Z444 233 aa8.58□□□□□ -1.04
SHANK2-202ENST00000357171 LINC01561Q8N1V8 128 aa8.58□□□□□ -1.04
SHANK2-202ENST00000357171 C2orf88Q9BSF0 95 aa8.58□□□□□ -1.04
SHANK2-202ENST00000357171 SPAG11BQ08648 103 aa8.57□□□□□ -1.04
SHANK2-202ENST00000357171 KIAA0087Q14695 138 aa8.57□□□□□ -1.04
SHANK2-202ENST00000357171 PAPPA-AS1Q5QFB9 102 aa8.57□□□□□ -1.04
SHANK2-202ENST00000357171 LINC00474Q9P2X8 69 aa8.57□□□□□ -1.04
SHANK2-202ENST00000357171 ORAOV1Q8WV07 137 aa8.56□□□□□ -1.04
SHANK2-202ENST00000357171 CAMK2N2Q96S95 79 aa8.56□□□□□ -1.04
SHANK2-202ENST00000357171 MRPL35Q9NZE8 188 aaKnown RBP8.56□□□□□ -1.04
SHANK2-202ENST00000357171 TRAPPC1Q9Y5R8 145 aa8.56□□□□□ -1.04
SHANK2-202ENST00000357171 IGKV2-24A0A0C4DH68 120 aa8.55□□□□□ -1.04
SHANK2-202ENST00000357171 LOC107984640A0A0U1RRK4 108 aa8.55□□□□□ -1.04
SHANK2-202ENST00000357171 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.55□□□□□ -1.04
SHANK2-202ENST00000357171 MAJINQ3KP22 176 aa8.55□□□□□ -1.04
SHANK2-202ENST00000357171 C18orf32Q8TCD1 76 aa8.55□□□□□ -1.04
SHANK2-202ENST00000357171 URB1-AS1Q96HZ7 61 aa8.55□□□□□ -1.04
SHANK2-202ENST00000357171 PTTG1IPP53801 180 aa8.54□□□□□ -1.04
SHANK2-202ENST00000357171 RPL37AP61513 92 aaKnown RBP8.54□□□□□ -1.04
SHANK2-202ENST00000357171 DPH3Q96FX2 82 aa8.54□□□□□ -1.04
SHANK2-202ENST00000357171 SCGB3A1Q96QR1 104 aa8.54□□□□□ -1.04
SHANK2-202ENST00000357171 A0A096LNJ9 63 aa8.53□□□□□ -1.04
SHANK2-202ENST00000357171 FA2HQ7L5A8 372 aa8.53□□□□□ -1.04
SHANK2-202ENST00000357171 STPG4Q8N801 248 aa8.53□□□□□ -1.04
SHANK2-202ENST00000357171 NDUFA1O15239 70 aa8.52□□□□□ -1.05
SHANK2-202ENST00000357171 TLX1NBP0CAT3 122 aa8.52□□□□□ -1.05
SHANK2-202ENST00000357171 HERVK_113P63121 156 aa8.52□□□□□ -1.05
SHANK2-202ENST00000357171 SEC11AP67812 179 aa8.52□□□□□ -1.05
SHANK2-202ENST00000357171 C10orf25Q5T742 122 aa8.52□□□□□ -1.05
SHANK2-202ENST00000357171 LINC00614P0C842 121 aa8.51□□□□□ -1.05
SHANK2-202ENST00000357171 UNQ6190/PRO20217Q6UXQ8 127 aa8.51□□□□□ -1.05
SHANK2-202ENST00000357171 SLC7A5P1Q8MH63 180 aa8.51□□□□□ -1.05
SHANK2-202ENST00000357171 SMCO4Q9NRQ5 59 aa8.51□□□□□ -1.05
SHANK2-202ENST00000357171 C6orf48Q9UBA6 75 aa8.51□□□□□ -1.05
SHANK2-202ENST00000357171 CDKN2A-AS1Q9UH64 79 aa8.51□□□□□ -1.05
SHANK2-202ENST00000357171 IGLV5-45A0A087WSX0 123 aa8.5□□□□□ -1.05
SHANK2-202ENST00000357171 A0A0J9YXV3 536 aa8.5□□□□□ -1.05
SHANK2-202ENST00000357171 HNRNPA3P51991 378 aaKnown RBP8.5□□□□□ -1.05
SHANK2-202ENST00000357171 CST9LQ9H4G1 147 aa8.5□□□□□ -1.05
SHANK2-202ENST00000357171 TINCRA0A1B0GVN0 87 aa8.49□□□□□ -1.05
SHANK2-202ENST00000357171 KRTAP29-1A8MX34 341 aaPredicted RBP8.49□□□□□ -1.05
SHANK2-202ENST00000357171 GAGE2BQ13066 116 aa8.49□□□□□ -1.05
SHANK2-202ENST00000357171 TNXBP22105 4242 aa8.49□□□□□ -1.05
SHANK2-202ENST00000357171 TRBV30A0A0K0K1B3 111 aa8.48□□□□□ -1.05
SHANK2-202ENST00000357171 PMVKQ15126 192 aa8.48□□□□□ -1.05
SHANK2-202ENST00000357171 CBLN2Q8IUK8 224 aa8.48□□□□□ -1.05
SHANK2-202ENST00000357171 Q8IZM0 81 aa8.48□□□□□ -1.05
SHANK2-202ENST00000357171 A0A1W2PNN7 141 aa8.48□□□□□ -1.05
SHANK2-202ENST00000357171 PDZD11Q5EBL8 140 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms