RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 PRORYQ9H606 182 aa10.84□□□□□ -0.67
CHD4-201ENST00000357008 WFDC13Q8IUB5 93 aa10.84□□□□□ -0.67
CHD4-201ENST00000357008 DSCAMO60469 2012 aa10.84□□□□□ -0.67
CHD4-201ENST00000357008 IGLV4-69A0A075B6H9 119 aa10.84□□□□□ -0.67
CHD4-201ENST00000357008 LINC00526Q96FQ7 95 aa10.84□□□□□ -0.67
CHD4-201ENST00000357008 LINC00694P0DN24 101 aa10.84□□□□□ -0.67
CHD4-201ENST00000357008 LINC00242Q5T6M2 205 aa10.84□□□□□ -0.67
CHD4-201ENST00000357008 SMIM26A0A096LP01 95 aa10.83□□□□□ -0.68
CHD4-201ENST00000357008 NTM-AS1Q6ZSK4 140 aa10.83□□□□□ -0.68
CHD4-201ENST00000357008 K7ERS5 55 aa10.83□□□□□ -0.68
CHD4-201ENST00000357008 NAV3Q8IVL0 2385 aa10.82□□□□□ -0.68
CHD4-201ENST00000357008 PRM2P04554 102 aa10.82□□□□□ -0.68
CHD4-201ENST00000357008 MYO18BQ8IUG5 2567 aa10.81□□□□□ -0.68
CHD4-201ENST00000357008 OTOGLQ3ZCN5 2332 aa10.81□□□□□ -0.68
CHD4-201ENST00000357008 TRAV7A0A075B6U4 112 aa10.81□□□□□ -0.68
CHD4-201ENST00000357008 RPL28P46779 137 aaKnown RBP10.81□□□□□ -0.68
CHD4-201ENST00000357008 A6NED7 52 aa10.81□□□□□ -0.68
CHD4-201ENST00000357008 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.81□□□□□ -0.68
CHD4-201ENST00000357008 CLUHP3Q96NS8 147 aa10.8□□□□□ -0.68
CHD4-201ENST00000357008 CRIP2P52943 208 aaPredicted RBP10.8□□□□□ -0.68
CHD4-201ENST00000357008 ARHGAP32A7KAX9 2087 aa10.8□□□□□ -0.68
CHD4-201ENST00000357008 COL4A4P53420 1690 aaPredicted RBP10.8□□□□□ -0.68
CHD4-201ENST00000357008 COX8CQ7Z4L0 72 aa10.8□□□□□ -0.68
CHD4-201ENST00000357008 SMIM1B2RUZ4 78 aa10.79□□□□□ -0.68
CHD4-201ENST00000357008 PRR4Q16378 134 aa10.79□□□□□ -0.68
CHD4-201ENST00000357008 Q8N9L7 120 aa10.79□□□□□ -0.68
CHD4-201ENST00000357008 A0A0J9YWU9 116 aa10.79□□□□□ -0.68
CHD4-201ENST00000357008 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.78□□□□□ -0.68
CHD4-201ENST00000357008 KPRPQ5T749 579 aaPredicted RBP10.78□□□□□ -0.68
CHD4-201ENST00000357008 TSPEAR-AS2P59090 65 aa10.78□□□□□ -0.68
CHD4-201ENST00000357008 ATG2AQ2TAZ0 1938 aa10.78□□□□□ -0.68
CHD4-201ENST00000357008 TRAV10A0A0B4J240 114 aa10.78□□□□□ -0.68
CHD4-201ENST00000357008 WFDC10AQ9H1F0 79 aa10.78□□□□□ -0.68
CHD4-201ENST00000357008 A0A096LNJ9 63 aa10.77□□□□□ -0.68
CHD4-201ENST00000357008 CYSRT1A8MQ03 144 aa10.77□□□□□ -0.69
CHD4-201ENST00000357008 C18orf65Q6ZTR6 163 aa10.77□□□□□ -0.69
CHD4-201ENST00000357008 SERP1Q9Y6X1 66 aa10.77□□□□□ -0.69
CHD4-201ENST00000357008 Q8N814 137 aa10.77□□□□□ -0.69
CHD4-201ENST00000357008 PPDPFQ9H3Y8 114 aa10.77□□□□□ -0.69
CHD4-201ENST00000357008 LINC01006Q8NI28 216 aa10.76□□□□□ -0.69
CHD4-201ENST00000357008 C1orf195Q5TG92 126 aa10.76□□□□□ -0.69
CHD4-201ENST00000357008 FAM30AQ9NZY2 134 aa10.76□□□□□ -0.69
CHD4-201ENST00000357008 ZNF706Q9Y5V0 76 aaPredicted RBP10.76□□□□□ -0.69
CHD4-201ENST00000357008 LOC107984640A0A0U1RRK4 108 aa10.76□□□□□ -0.69
CHD4-201ENST00000357008 CHCHD7Q9BUK0 85 aa10.76□□□□□ -0.69
CHD4-201ENST00000357008 M0QXV9 152 aa10.75□□□□□ -0.69
CHD4-201ENST00000357008 RPL37AP8A6NKH3 93 aa10.74□□□□□ -0.69
CHD4-201ENST00000357008 LRCOL1A6NCL2 159 aa10.74□□□□□ -0.69
CHD4-201ENST00000357008 HRCT1Q6UXD1 115 aa10.74□□□□□ -0.69
CHD4-201ENST00000357008 NAV2Q8IVL1 2488 aa10.74□□□□□ -0.69
CHD4-201ENST00000357008 A0A087WVE0 104 aa10.74□□□□□ -0.69
CHD4-201ENST00000357008 AMELXQ99217 191 aa10.74□□□□□ -0.69
CHD4-201ENST00000357008 ADAMTSL4-AS1Q5T5F5 129 aa10.73□□□□□ -0.69
CHD4-201ENST00000357008 INAFM1C9JVW0 142 aa10.73□□□□□ -0.69
CHD4-201ENST00000357008 HIVEP3Q5T1R4 2406 aa10.73□□□□□ -0.69
CHD4-201ENST00000357008 IGLV2-18A0A075B6J9 118 aa10.73□□□□□ -0.69
CHD4-201ENST00000357008 SPINK6Q6UWN8 80 aa10.73□□□□□ -0.69
CHD4-201ENST00000357008 COX6A2Q02221 97 aa10.72□□□□□ -0.69
CHD4-201ENST00000357008 UNQ6190/PRO20217Q6UXQ8 127 aa10.72□□□□□ -0.69
CHD4-201ENST00000357008 CSDC2Q9Y534 153 aaKnown RBP10.72□□□□□ -0.69
CHD4-201ENST00000357008 CELA1Q9UNI1 258 aa10.72□□□□□ -0.69
CHD4-201ENST00000357008 A0A087WYN8 130 aa10.72□□□□□ -0.69
CHD4-201ENST00000357008 SHISA2Q6UWI4 295 aa10.72□□□□□ -0.69
CHD4-201ENST00000357008 EML5Q05BV3 1969 aa10.71□□□□□ -0.69
CHD4-201ENST00000357008 C10orf142B7Z368 130 aa10.71□□□□□ -0.69
CHD4-201ENST00000357008 EGFEM1PQ0D2K5 195 aa10.71□□□□□ -0.69
CHD4-201ENST00000357008 ODF3L2Q3SX64 289 aa10.71□□□□□ -0.7
CHD4-201ENST00000357008 C7orf33Q8WU49 177 aa10.7□□□□□ -0.7
CHD4-201ENST00000357008 MUC22E2RYF6 1773 aaPredicted RBP10.69□□□□□ -0.7
CHD4-201ENST00000357008 TRBV10-3A0A0K0K1G6 114 aa10.69□□□□□ -0.7
CHD4-201ENST00000357008 EDN2P20800 178 aa10.69□□□□□ -0.7
CHD4-201ENST00000357008 C1orf137Q5JT78 98 aa10.67□□□□□ -0.7
CHD4-201ENST00000357008 ZNF580Q9UK33 172 aa10.67□□□□□ -0.7
CHD4-201ENST00000357008 C9orf116Q5BN46 136 aaPredicted RBP10.67□□□□□ -0.7
CHD4-201ENST00000357008 Q8N3U1 123 aa10.67□□□□□ -0.7
CHD4-201ENST00000357008 CCDC168Q8NDH2 2452 aa10.67□□□□□ -0.7
CHD4-201ENST00000357008 IGLV4-60A0A075B6I1 120 aa10.66□□□□□ -0.7
CHD4-201ENST00000357008 BRI3O95415 125 aa10.66□□□□□ -0.7
CHD4-201ENST00000357008 PRYO14603 147 aa10.66□□□□□ -0.7
CHD4-201ENST00000357008 PLAC8L1A1L4L8 177 aa10.66□□□□□ -0.7
CHD4-201ENST00000357008 MYO9AB2RTY4 2548 aa10.66□□□□□ -0.7
CHD4-201ENST00000357008 SOSTDC1Q6X4U4 206 aa10.65□□□□□ -0.7
CHD4-201ENST00000357008 LINC00208Q96KT6 92 aa10.65□□□□□ -0.7
CHD4-201ENST00000357008 PRR3P79522 188 aaKnown RBP10.65□□□□□ -0.7
CHD4-201ENST00000357008 AVPP01185 164 aa10.65□□□□□ -0.71
CHD4-201ENST00000357008 LINC00474Q9P2X8 69 aa10.65□□□□□ -0.71
CHD4-201ENST00000357008 C10orf25Q5T742 122 aa10.65□□□□□ -0.71
CHD4-201ENST00000357008 IGLV9-49A0A0B4J1Y8 123 aa10.64□□□□□ -0.71
CHD4-201ENST00000357008 ZNF843Q8N446 348 aa10.64□□□□□ -0.71
CHD4-201ENST00000357008 BEAN1Q3B7T3 259 aa10.63□□□□□ -0.71
CHD4-201ENST00000357008 LY6G6DO95868 133 aa10.62□□□□□ -0.71
CHD4-201ENST00000357008 FHL2Q14192 279 aa10.62□□□□□ -0.71
CHD4-201ENST00000357008 ABCA2Q9BZC7 2435 aa10.61□□□□□ -0.71
CHD4-201ENST00000357008 PRO3102Q9H379 93 aa10.61□□□□□ -0.71
CHD4-201ENST00000357008 CDSNQ15517 529 aa10.61□□□□□ -0.71
CHD4-201ENST00000357008 CDIP1Q9H305 208 aa10.61□□□□□ -0.71
CHD4-201ENST00000357008 PMAIP1Q13794 54 aa10.61□□□□□ -0.71
CHD4-201ENST00000357008 LINC00846Q9NV44 126 aa10.6□□□□□ -0.71
CHD4-201ENST00000357008 TRBV7-7A0A0K0K1E9 115 aa10.6□□□□□ -0.71
CHD4-201ENST00000357008 IGLV1-51P01701 117 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms