RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 LINC00337Q8N6G1 96 aa7.22□□□□□ -1.25
PTPRA-203ENST00000356147 VPREB3Q9UKI3 123 aa7.22□□□□□ -1.25
PTPRA-203ENST00000356147 A0A087WYN8 130 aa7.22□□□□□ -1.25
PTPRA-203ENST00000356147 IGKV3D-7A0A0C4DH55 119 aa7.22□□□□□ -1.25
PTPRA-203ENST00000356147 PFN2P35080 140 aa7.22□□□□□ -1.25
PTPRA-203ENST00000356147 FAM110AQ9BQ89 295 aa7.22□□□□□ -1.25
PTPRA-203ENST00000356147 C14orf132Q9NPU4 83 aa7.22□□□□□ -1.25
PTPRA-203ENST00000356147 LOC107984640A0A0U1RRK4 108 aa7.21□□□□□ -1.25
PTPRA-203ENST00000356147 SLPIP03973 132 aa7.21□□□□□ -1.25
PTPRA-203ENST00000356147 MRPL23Q16540 153 aaKnown RBP7.21□□□□□ -1.25
PTPRA-203ENST00000356147 ZNF462Q96JM2 2506 aa7.21□□□□□ -1.26
PTPRA-203ENST00000356147 C1orf158Q8N1D5 194 aa7.21□□□□□ -1.26
PTPRA-203ENST00000356147 NOP10Q9NPE3 64 aaKnown RBP7.21□□□□□ -1.26
PTPRA-203ENST00000356147 GCN1Q92616 2671 aaKnown RBP7.21□□□□□ -1.26
PTPRA-203ENST00000356147 F5H768 121 aa7.21□□□□□ -1.26
PTPRA-203ENST00000356147 LINC00158P58513 81 aa7.21□□□□□ -1.26
PTPRA-203ENST00000356147 RPL36AP83881 106 aaKnown RBP7.21□□□□□ -1.26
PTPRA-203ENST00000356147 RPL36ALQ969Q0 106 aaKnown RBP7.21□□□□□ -1.26
PTPRA-203ENST00000356147 WFDC10AQ9H1F0 79 aa7.21□□□□□ -1.26
PTPRA-203ENST00000356147 CDC42SE2Q9NRR3 84 aa7.21□□□□□ -1.26
PTPRA-203ENST00000356147 DNAJC30Q96LL9 226 aa7.2□□□□□ -1.26
PTPRA-203ENST00000356147 ODF3L2Q3SX64 289 aa7.2□□□□□ -1.26
PTPRA-203ENST00000356147 LINC00643Q86TS7 51 aa7.2□□□□□ -1.26
PTPRA-203ENST00000356147 IGKV2-28A0A075B6P5 120 aa7.19□□□□□ -1.26
PTPRA-203ENST00000356147 A0A087WVE0 104 aa7.19□□□□□ -1.26
PTPRA-203ENST00000356147 UBE2L6O14933 153 aa7.19□□□□□ -1.26
PTPRA-203ENST00000356147 IGKV2D-28P01615 120 aa7.19□□□□□ -1.26
PTPRA-203ENST00000356147 CRPP02741 224 aa7.19□□□□□ -1.26
PTPRA-203ENST00000356147 STHQ8IWL8 128 aa7.19□□□□□ -1.26
PTPRA-203ENST00000356147 LINC01356Q8N9X3 169 aa7.19□□□□□ -1.26
PTPRA-203ENST00000356147 SND1-IT1Q9HBX3 110 aa7.19□□□□□ -1.26
PTPRA-203ENST00000356147 ACANP16112 2415 aa7.19□□□□□ -1.26
PTPRA-203ENST00000356147 MALP21145 153 aa7.19□□□□□ -1.26
PTPRA-203ENST00000356147 DEFB114Q30KQ6 69 aa7.19□□□□□ -1.26
PTPRA-203ENST00000356147 C5orf38Q86SI9 138 aa7.19□□□□□ -1.26
PTPRA-203ENST00000356147 RNF152Q8N8N0 203 aa7.19□□□□□ -1.26
PTPRA-203ENST00000356147 OR13C6PQ8NH95 151 aa7.19□□□□□ -1.26
PTPRA-203ENST00000356147 K7EQD1 137 aa7.18□□□□□ -1.26
PTPRA-203ENST00000356147 HIST2H2BCQ6DN03 193 aa7.18□□□□□ -1.26
PTPRA-203ENST00000356147 SMIM11BQ8TCY0 68 aa7.18□□□□□ -1.26
PTPRA-203ENST00000356147 NCR3O14931 201 aa7.18□□□□□ -1.26
PTPRA-203ENST00000356147 DNAL4O96015 105 aa7.18□□□□□ -1.26
PTPRA-203ENST00000356147 TRACP01848 142 aa7.18□□□□□ -1.26
PTPRA-203ENST00000356147 ACYP1P07311 99 aa7.18□□□□□ -1.26
PTPRA-203ENST00000356147 CYSTM1Q9H1C7 97 aa7.18□□□□□ -1.26
PTPRA-203ENST00000356147 IGLV4-60A0A075B6I1 120 aa7.17□□□□□ -1.26
PTPRA-203ENST00000356147 LECT2O14960 151 aa7.17□□□□□ -1.26
PTPRA-203ENST00000356147 TRGV2A0A075B6R0 118 aa7.17□□□□□ -1.26
PTPRA-203ENST00000356147 C3orf22Q8N5N4 141 aa7.17□□□□□ -1.26
PTPRA-203ENST00000356147 PEMTQ9UBM1 199 aa7.17□□□□□ -1.26
PTPRA-203ENST00000356147 APCP25054 2843 aa7.17□□□□□ -1.26
PTPRA-203ENST00000356147 RPL35AP18077 110 aaKnown RBP7.16□□□□□ -1.26
PTPRA-203ENST00000356147 A8MTW9 85 aa7.16□□□□□ -1.26
PTPRA-203ENST00000356147 PAX4O43316 350 aa7.16□□□□□ -1.26
PTPRA-203ENST00000356147 CLPSL2Q6UWE3 100 aa7.16□□□□□ -1.26
PTPRA-203ENST00000356147 Q6YL49 198 aa7.16□□□□□ -1.26
PTPRA-203ENST00000356147 COX7B2Q8TF08 81 aa7.16□□□□□ -1.26
PTPRA-203ENST00000356147 hADV29S1A0JD25 119 aa7.16□□□□□ -1.26
PTPRA-203ENST00000356147 CCL18P55774 89 aa7.16□□□□□ -1.26
PTPRA-203ENST00000356147 TMEM243Q9BU79 118 aa7.16□□□□□ -1.26
PTPRA-203ENST00000356147 PRR3P79522 188 aaKnown RBP7.15□□□□□ -1.26
PTPRA-203ENST00000356147 LINC00846Q9NV44 126 aa7.15□□□□□ -1.26
PTPRA-203ENST00000356147 CR1P17927 2039 aa7.14□□□□□ -1.27
PTPRA-203ENST00000356147 IMUPQ9GZP8 106 aa7.14□□□□□ -1.27
PTPRA-203ENST00000356147 TRAV13-2A0A0B4J235 113 aa7.14□□□□□ -1.27
PTPRA-203ENST00000356147 RNASE1P07998 156 aaKnown RBP7.14□□□□□ -1.27
PTPRA-203ENST00000356147 INAFM2P0DMQ5 153 aa7.14□□□□□ -1.27
PTPRA-203ENST00000356147 RPL28P46779 137 aaKnown RBP7.14□□□□□ -1.27
PTPRA-203ENST00000356147 WFDC9Q8NEX5 89 aa7.14□□□□□ -1.27
PTPRA-203ENST00000356147 TMEM126AQ9H061 195 aa7.14□□□□□ -1.27
PTPRA-203ENST00000356147 PRORYQ9H606 182 aa7.14□□□□□ -1.27
PTPRA-203ENST00000356147 FLNAP21333 2647 aaKnown RBP7.13□□□□□ -1.27
PTPRA-203ENST00000356147 UQCRQO14949 82 aa7.13□□□□□ -1.27
PTPRA-203ENST00000356147 KRTAP10-9P60411 292 aa7.13□□□□□ -1.27
PTPRA-203ENST00000356147 COPS9Q8WXC6 57 aa7.13□□□□□ -1.27
PTPRA-203ENST00000356147 ITPR3Q14573 2671 aa7.13□□□□□ -1.27
PTPRA-203ENST00000356147 A0A096LPF7 62 aa7.13□□□□□ -1.27
PTPRA-203ENST00000356147 A0A096LNT2 108 aa7.12□□□□□ -1.27
PTPRA-203ENST00000356147 TRGV4A0A0C4DH28 118 aa7.12□□□□□ -1.27
PTPRA-203ENST00000356147 A0A1B0GX51 115 aa7.12□□□□□ -1.27
PTPRA-203ENST00000356147 LRRC75A-AS1Q8N1F1 130 aa7.12□□□□□ -1.27
PTPRA-203ENST00000356147 XCL1P47992 114 aa7.12□□□□□ -1.27
PTPRA-203ENST00000356147 C4orf3Q8WVX3 66 aa7.12□□□□□ -1.27
PTPRA-203ENST00000356147 LINC00526Q96FQ7 95 aa7.12□□□□□ -1.27
PTPRA-203ENST00000356147 CSDC2Q9Y534 153 aaKnown RBP7.12□□□□□ -1.27
PTPRA-203ENST00000356147 IGHV4-31P0DP07 118 aa7.11□□□□□ -1.27
PTPRA-203ENST00000356147 COX7CP15954 63 aa7.11□□□□□ -1.27
PTPRA-203ENST00000356147 C2orf48Q96LS8 159 aa7.11□□□□□ -1.27
PTPRA-203ENST00000356147 HIST1H4AP62805 103 aaKnown RBP7.11□□□□□ -1.27
PTPRA-203ENST00000356147 FAM222AQ5U5X8 452 aa7.11□□□□□ -1.27
PTPRA-203ENST00000356147 TRBV10-1A0A0K0K1A3 114 aa7.1□□□□□ -1.27
PTPRA-203ENST00000356147 PRB1P04280 392 aa7.1□□□□□ -1.27
PTPRA-203ENST00000356147 DEFB130BP0DP73 79 aa7.1□□□□□ -1.27
PTPRA-203ENST00000356147 DEFB130AP0DP74 79 aa7.1□□□□□ -1.27
PTPRA-203ENST00000356147 CXCL5P42830 114 aa7.1□□□□□ -1.27
PTPRA-203ENST00000356147 HILS1P60008 231 aa7.1□□□□□ -1.27
PTPRA-203ENST00000356147 KIR2DL5BQ8NHK3 375 aa7.1□□□□□ -1.27
PTPRA-203ENST00000356147 IL17DQ8TAD2 202 aa7.1□□□□□ -1.27
PTPRA-203ENST00000356147 C6orf226Q5I0X4 101 aa7.1□□□□□ -1.27
PTPRA-203ENST00000356147 FAM19A3Q7Z5A8 133 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms