RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 K7EQD1 137 aa9.58□□□□□ -0.88
NCDN-201ENST00000356090 DSCR9P59020 149 aa9.58□□□□□ -0.88
NCDN-201ENST00000356090 COPS9Q8WXC6 57 aa9.58□□□□□ -0.88
NCDN-201ENST00000356090 WFDC10AQ9H1F0 79 aa9.58□□□□□ -0.88
NCDN-201ENST00000356090 Q6YL49 198 aa9.58□□□□□ -0.88
NCDN-201ENST00000356090 C5orf38Q86SI9 138 aa9.58□□□□□ -0.88
NCDN-201ENST00000356090 PAX4O43316 350 aa9.57□□□□□ -0.88
NCDN-201ENST00000356090 ATP5G1P05496 136 aa9.57□□□□□ -0.88
NCDN-201ENST00000356090 TMEM243Q9BU79 118 aa9.57□□□□□ -0.88
NCDN-201ENST00000356090 TRAV25A0A0B4J276 109 aa9.57□□□□□ -0.88
NCDN-201ENST00000356090 PLA2G2AP14555 144 aa9.57□□□□□ -0.88
NCDN-201ENST00000356090 RNASE1P07998 156 aaKnown RBP9.57□□□□□ -0.88
NCDN-201ENST00000356090 ODF3L2Q3SX64 289 aa9.57□□□□□ -0.88
NCDN-201ENST00000356090 TIMM17BO60830 172 aa9.56□□□□□ -0.88
NCDN-201ENST00000356090 CLPSL2Q6UWE3 100 aa9.56□□□□□ -0.88
NCDN-201ENST00000356090 NTM-AS1Q6ZSK4 140 aa9.56□□□□□ -0.88
NCDN-201ENST00000356090 SND1-IT1Q9HBX3 110 aa9.56□□□□□ -0.88
NCDN-201ENST00000356090 C1orf158Q8N1D5 194 aa9.55□□□□□ -0.88
NCDN-201ENST00000356090 FAM218AQ96MZ4 157 aa9.55□□□□□ -0.88
NCDN-201ENST00000356090 DEFB130BP0DP73 79 aa9.55□□□□□ -0.88
NCDN-201ENST00000356090 DEFB130AP0DP74 79 aa9.55□□□□□ -0.88
NCDN-201ENST00000356090 CSDC2Q9Y534 153 aaKnown RBP9.55□□□□□ -0.88
NCDN-201ENST00000356090 J3QLI3 93 aa9.54□□□□□ -0.88
NCDN-201ENST00000356090 A0A096LPF7 62 aa9.54□□□□□ -0.88
NCDN-201ENST00000356090 C9orf153Q5TBE3 101 aa9.54□□□□□ -0.88
NCDN-201ENST00000356090 NIPBLQ6KC79 2804 aaeCLIP9.54□□□□□ -0.88
NCDN-201ENST00000356090 Q6Q795 121 aa9.54□□□□□ -0.88
NCDN-201ENST00000356090 NBEAL2Q6ZNJ1 2754 aa9.54□□□□□ -0.88
NCDN-201ENST00000356090 Q96MF0 132 aa9.53□□□□□ -0.88
NCDN-201ENST00000356090 CDC42SE2Q9NRR3 84 aa9.53□□□□□ -0.88
NCDN-201ENST00000356090 IGHV4-31P0DP07 118 aa9.53□□□□□ -0.88
NCDN-201ENST00000356090 KRTAP10-9P60411 292 aa9.53□□□□□ -0.88
NCDN-201ENST00000356090 C14orf132Q9NPU4 83 aa9.53□□□□□ -0.88
NCDN-201ENST00000356090 FLNAP21333 2647 aaKnown RBP9.53□□□□□ -0.88
NCDN-201ENST00000356090 C4orf3Q8WVX3 66 aa9.53□□□□□ -0.88
NCDN-201ENST00000356090 IGKV3D-7A0A0C4DH55 119 aa9.52□□□□□ -0.89
NCDN-201ENST00000356090 SLPIP03973 132 aa9.52□□□□□ -0.89
NCDN-201ENST00000356090 COX7B2Q8TF08 81 aa9.52□□□□□ -0.89
NCDN-201ENST00000356090 IGLV5-39A0A0G2JS06 123 aa9.52□□□□□ -0.89
NCDN-201ENST00000356090 BEAN1Q3B7T3 259 aa9.52□□□□□ -0.89
NCDN-201ENST00000356090 RNF152Q8N8N0 203 aa9.52□□□□□ -0.89
NCDN-201ENST00000356090 EDA2RQ9HAV5 297 aa9.52□□□□□ -0.89
NCDN-201ENST00000356090 GCN1Q92616 2671 aaKnown RBP9.51□□□□□ -0.89
NCDN-201ENST00000356090 C6orf226Q5I0X4 101 aa9.51□□□□□ -0.89
NCDN-201ENST00000356090 HIST2H2BCQ6DN03 193 aa9.51□□□□□ -0.89
NCDN-201ENST00000356090 IGLV5-45A0A087WSX0 123 aa9.51□□□□□ -0.89
NCDN-201ENST00000356090 CCL24O00175 119 aa9.51□□□□□ -0.89
NCDN-201ENST00000356090 LECT2O14960 151 aa9.51□□□□□ -0.89
NCDN-201ENST00000356090 SMCR5Q8TEV8 140 aa9.51□□□□□ -0.89
NCDN-201ENST00000356090 TRAV13-2A0A0B4J235 113 aa9.5□□□□□ -0.89
NCDN-201ENST00000356090 FAM240AA0A1B0GVK7 77 aa9.5□□□□□ -0.89
NCDN-201ENST00000356090 XCL1P47992 114 aa9.5□□□□□ -0.89
NCDN-201ENST00000356090 SMIM9A6NGZ8 99 aa9.5□□□□□ -0.89
NCDN-201ENST00000356090 MALP21145 153 aa9.5□□□□□ -0.89
NCDN-201ENST00000356090 SDIM1Q6ZPB5 146 aa9.5□□□□□ -0.89
NCDN-201ENST00000356090 LINC00337Q8N6G1 96 aa9.5□□□□□ -0.89
NCDN-201ENST00000356090 LOC107984640A0A0U1RRK4 108 aa9.49□□□□□ -0.89
NCDN-201ENST00000356090 IGLV4-60A0A075B6I1 120 aa9.49□□□□□ -0.89
NCDN-201ENST00000356090 ACYP1P07311 99 aa9.49□□□□□ -0.89
NCDN-201ENST00000356090 INAFM2P0DMQ5 153 aa9.49□□□□□ -0.89
NCDN-201ENST00000356090 LINC00643Q86TS7 51 aa9.49□□□□□ -0.89
NCDN-201ENST00000356090 A0A087WYN8 130 aa9.48□□□□□ -0.89
NCDN-201ENST00000356090 TRBV10-1A0A0K0K1A3 114 aa9.48□□□□□ -0.89
NCDN-201ENST00000356090 TRACP01848 142 aa9.48□□□□□ -0.89
NCDN-201ENST00000356090 SMIM11BQ8TCY0 68 aa9.48□□□□□ -0.89
NCDN-201ENST00000356090 NCR3O14931 201 aa9.47□□□□□ -0.89
NCDN-201ENST00000356090 ITPR3Q14573 2671 aa9.47□□□□□ -0.89
NCDN-201ENST00000356090 F5H768 121 aa9.46□□□□□ -0.89
NCDN-201ENST00000356090 SETXQ7Z333 2677 aaKnown RBP9.46□□□□□ -0.89
NCDN-201ENST00000356090 HIST1H4AP62805 103 aaKnown RBP9.46□□□□□ -0.9
NCDN-201ENST00000356090 KLK5Q9Y337 293 aaPredicted RBP9.46□□□□□ -0.9
NCDN-201ENST00000356090 CCL18P55774 89 aa9.46□□□□□ -0.9
NCDN-201ENST00000356090 TRBV7-7A0A0K0K1E9 115 aa9.45□□□□□ -0.9
NCDN-201ENST00000356090 ESM1Q9NQ30 184 aa9.44□□□□□ -0.9
NCDN-201ENST00000356090 IGLV10-54A0A075B6I4 117 aa9.44□□□□□ -0.9
NCDN-201ENST00000356090 PRR3P79522 188 aaKnown RBP9.43□□□□□ -0.9
NCDN-201ENST00000356090 DEFB121Q5J5C9 76 aa9.43□□□□□ -0.9
NCDN-201ENST00000356090 C9orf129Q5T035 196 aaKnown RBP9.43□□□□□ -0.9
NCDN-201ENST00000356090 A8MTW9 85 aa9.43□□□□□ -0.9
NCDN-201ENST00000356090 IGKV2-28A0A075B6P5 120 aa9.43□□□□□ -0.9
NCDN-201ENST00000356090 A0A087WVE0 104 aa9.43□□□□□ -0.9
NCDN-201ENST00000356090 IGKV2D-28P01615 120 aa9.43□□□□□ -0.9
NCDN-201ENST00000356090 A0A096LNT2 108 aa9.42□□□□□ -0.9
NCDN-201ENST00000356090 DNAJC9-AS1A6NH13 148 aa9.42□□□□□ -0.9
NCDN-201ENST00000356090 RPL28P46779 137 aaKnown RBP9.41□□□□□ -0.9
NCDN-201ENST00000356090 DEFB113Q30KQ7 82 aa9.41□□□□□ -0.9
NCDN-201ENST00000356090 C16orf74Q96GX8 76 aa9.41□□□□□ -0.9
NCDN-201ENST00000356090 TRBV6-8A0A0A6YYG3 113 aa9.41□□□□□ -0.9
NCDN-201ENST00000356090 TMEM86BQ8N661 226 aa9.41□□□□□ -0.9
NCDN-201ENST00000356090 LINC01600Q96MT4 127 aa9.41□□□□□ -0.9
NCDN-201ENST00000356090 GYPEP15421 78 aa9.4□□□□□ -0.9
NCDN-201ENST00000356090 CR1P17927 2039 aa9.4□□□□□ -0.9
NCDN-201ENST00000356090 A0A1B0GX51 115 aa9.4□□□□□ -0.9
NCDN-201ENST00000356090 DEFB4AO15263 64 aa9.4□□□□□ -0.9
NCDN-201ENST00000356090 FAM19A5Q7Z5A7 132 aaPredicted RBP9.4□□□□□ -0.9
NCDN-201ENST00000356090 C3orf22Q8N5N4 141 aa9.4□□□□□ -0.91
NCDN-201ENST00000356090 hADV29S1A0JD25 119 aa9.39□□□□□ -0.91
NCDN-201ENST00000356090 PF4P02776 101 aa9.39□□□□□ -0.91
NCDN-201ENST00000356090 WFDC11Q8NEX6 87 aa9.39□□□□□ -0.91
NCDN-201ENST00000356090 IMUPQ9GZP8 106 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms