RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 RBM12B-AS1Q9P1G2 102 aa3.66□□□□□ -1.82
CKAP5-202ENST00000354558 ZNF407Q9C0G0 2248 aa3.66□□□□□ -1.82
CKAP5-202ENST00000354558 IGLV4-3A0A075B6K6 122 aa3.66□□□□□ -1.82
CKAP5-202ENST00000354558 M0QY20 66 aa3.66□□□□□ -1.82
CKAP5-202ENST00000354558 ZNF80P51504 273 aaPredicted RBP3.66□□□□□ -1.82
CKAP5-202ENST00000354558 MRPS36P82909 103 aaKnown RBP3.66□□□□□ -1.82
CKAP5-202ENST00000354558 Q8IZM0 81 aa3.66□□□□□ -1.82
CKAP5-202ENST00000354558 NRACQ8N912 160 aa3.66□□□□□ -1.82
CKAP5-202ENST00000354558 NOTCH4Q99466 2003 aa3.66□□□□□ -1.82
CKAP5-202ENST00000354558 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.66□□□□□ -1.822e-7■■■■■ 47.8
CKAP5-202ENST00000354558 K7EP34 96 aa3.66□□□□□ -1.82
CKAP5-202ENST00000354558 SMCR5Q8TEV8 140 aa3.66□□□□□ -1.82
CKAP5-202ENST00000354558 CACNA1DQ01668 2161 aa3.66□□□□□ -1.82
CKAP5-202ENST00000354558 GVINP1Q7Z2Y8 2422 aa3.65□□□□□ -1.82
CKAP5-202ENST00000354558 ENHOQ6UWT2 76 aa3.65□□□□□ -1.82
CKAP5-202ENST00000354558 PHF5AQ7RTV0 110 aaKnown RBP3.65□□□□□ -1.82
CKAP5-202ENST00000354558 E9PLD3 99 aa3.65□□□□□ -1.82
CKAP5-202ENST00000354558 K7EP13 123 aa3.65□□□□□ -1.82
CKAP5-202ENST00000354558 ATOX1O00244 68 aa3.65□□□□□ -1.82
CKAP5-202ENST00000354558 DEFB116Q30KQ4 102 aa3.65□□□□□ -1.82
CKAP5-202ENST00000354558 C20orf197Q8N268 126 aa3.65□□□□□ -1.82
CKAP5-202ENST00000354558 Q8N2B8 174 aa3.65□□□□□ -1.82
CKAP5-202ENST00000354558 TM2D3Q9BRN9 247 aa3.65□□□□□ -1.82
CKAP5-202ENST00000354558 NDUFC2-KCTD14E9PQ53 114 aa3.65□□□□□ -1.83
CKAP5-202ENST00000354558 UBE2V1Q13404 147 aa3.65□□□□□ -1.83
CKAP5-202ENST00000354558 C22orf24Q9Y442 160 aa3.65□□□□□ -1.83
CKAP5-202ENST00000354558 CRIP2P52943 208 aaPredicted RBP3.65□□□□□ -1.83
CKAP5-202ENST00000354558 NDUFV3P56181 108 aaKnown RBP3.65□□□□□ -1.83
CKAP5-202ENST00000354558 PCOTHQ58A44 107 aa3.65□□□□□ -1.83
CKAP5-202ENST00000354558 C1orf147Q96MC9 270 aaPredicted RBP3.65□□□□□ -1.83
CKAP5-202ENST00000354558 GOLGB1Q14789 3259 aaKnown RBP3.64□□□□□ -1.83
CKAP5-202ENST00000354558 LINC00575Q6W349 94 aa3.64□□□□□ -1.83
CKAP5-202ENST00000354558 LINC00304Q8N9R0 145 aa3.64□□□□□ -1.83
CKAP5-202ENST00000354558 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.64□□□□□ -1.83
CKAP5-202ENST00000354558 Q8N6K4 173 aa3.64□□□□□ -1.83
CKAP5-202ENST00000354558 TRBV10-3A0A0K0K1G6 114 aa3.63□□□□□ -1.83
CKAP5-202ENST00000354558 J3KT08 172 aa3.63□□□□□ -1.83
CKAP5-202ENST00000354558 RNASE3P12724 160 aaKnown RBP3.63□□□□□ -1.83
CKAP5-202ENST00000354558 ADCYAP1P18509 176 aa3.63□□□□□ -1.83
CKAP5-202ENST00000354558 LINC00313P59037 77 aa3.63□□□□□ -1.83
CKAP5-202ENST00000354558 Q6ZRU5 148 aa3.63□□□□□ -1.83
CKAP5-202ENST00000354558 LINC00308Q8TCZ7 52 aa3.63□□□□□ -1.83
CKAP5-202ENST00000354558 FAM167A-AS1Q96KT0 104 aa3.63□□□□□ -1.83
CKAP5-202ENST00000354558 ADAMTS20P59510 1910 aa3.63□□□□□ -1.83
CKAP5-202ENST00000354558 HCG22E2RYF7 251 aa3.63□□□□□ -1.83
CKAP5-202ENST00000354558 LINC00528Q8N1L1 170 aa3.63□□□□□ -1.83
CKAP5-202ENST00000354558 ARID1AO14497 2285 aa3.63□□□□□ -1.83
CKAP5-202ENST00000354558 DLEU1O43261 78 aa3.63□□□□□ -1.83
CKAP5-202ENST00000354558 K7EIL1 84 aa3.63□□□□□ -1.83
CKAP5-202ENST00000354558 TEN1Q86WV5 123 aa3.63□□□□□ -1.83
CKAP5-202ENST00000354558 KIF25-AS1Q9Y6Z4 181 aa3.63□□□□□ -1.83
CKAP5-202ENST00000354558 LINC00242Q5T6M2 205 aa3.63□□□□□ -1.83
CKAP5-202ENST00000354558 ALPK3Q96L96 1907 aa3.63□□□□□ -1.83
CKAP5-202ENST00000354558 OTOGLQ3ZCN5 2332 aa3.62□□□□□ -1.83
CKAP5-202ENST00000354558 MED12Q93074 2177 aa3.62□□□□□ -1.83
CKAP5-202ENST00000354558 A0A087WSZ3 146 aa3.62□□□□□ -1.83
CKAP5-202ENST00000354558 A6NED7 52 aa3.62□□□□□ -1.83
CKAP5-202ENST00000354558 TSHBP01222 138 aa3.62□□□□□ -1.83
CKAP5-202ENST00000354558 EXPH5Q8NEV8 1989 aa3.62□□□□□ -1.83
CKAP5-202ENST00000354558 PCDH15Q96QU1 1955 aa3.62□□□□□ -1.83
CKAP5-202ENST00000354558 PTPRQQ9UMZ3 2332 aa3.62□□□□□ -1.83
CKAP5-202ENST00000354558 CEP250Q9BV73 2442 aa3.62□□□□□ -1.83
CKAP5-202ENST00000354558 IGLV5-37A0A075B6J1 123 aa3.62□□□□□ -1.83
CKAP5-202ENST00000354558 NCOR1O75376 2440 aa3.61□□□□□ -1.83
CKAP5-202ENST00000354558 PCP4P48539 62 aa3.61□□□□□ -1.83
CKAP5-202ENST00000354558 SDIM1Q6ZPB5 146 aa3.61□□□□□ -1.83
CKAP5-202ENST00000354558 CDC42SE2Q9NRR3 84 aa3.61□□□□□ -1.83
CKAP5-202ENST00000354558 CSDC2Q9Y534 153 aaKnown RBP3.61□□□□□ -1.83
CKAP5-202ENST00000354558 Q8NBF4 154 aa3.61□□□□□ -1.83
CKAP5-202ENST00000354558 RNASE8Q8TDE3 154 aaKnown RBP3.61□□□□□ -1.83
CKAP5-202ENST00000354558 LINC00574Q9H8X3 128 aa3.61□□□□□ -1.83
CKAP5-202ENST00000354558 PCNX2A6NKB5 2137 aa3.61□□□□□ -1.83
CKAP5-202ENST00000354558 IGLV4-60A0A075B6I1 120 aa3.61□□□□□ -1.83
CKAP5-202ENST00000354558 LINC01547P58512 204 aaPredicted RBP3.61□□□□□ -1.83
CKAP5-202ENST00000354558 LINC00588Q9Y4M8 146 aa3.61□□□□□ -1.83
CKAP5-202ENST00000354558 ZNF22P17026 224 aaPredicted RBP3.61□□□□□ -1.83
CKAP5-202ENST00000354558 ARHGAP21Q5T5U3 1957 aa3.61□□□□□ -1.83
CKAP5-202ENST00000354558 PRRC2AP48634 2157 aaKnown RBP3.61□□□□□ -1.83
CKAP5-202ENST00000354558 A0A1W2PPR1 153 aa3.61□□□□□ -1.83
CKAP5-202ENST00000354558 SMIM11BQ8TCY0 68 aa3.61□□□□□ -1.83
CKAP5-202ENST00000354558 DOPEY2Q9Y3R5 2298 aa3.61□□□□□ -1.83
CKAP5-202ENST00000354558 WNK2Q9Y3S1 2297 aa3.6□□□□□ -1.83
CKAP5-202ENST00000354558 PCNX3Q9H6A9 2034 aa3.6□□□□□ -1.83
CKAP5-202ENST00000354558 LINC00173Q6ZV60 143 aa3.6□□□□□ -1.83
CKAP5-202ENST00000354558 KRTAP10-11P60412 298 aa3.59□□□□□ -1.83
CKAP5-202ENST00000354558 PRR9Q5T870 116 aa3.59□□□□□ -1.83
CKAP5-202ENST00000354558 PLXNB3Q9ULL4 1909 aa3.59□□□□□ -1.83
CKAP5-202ENST00000354558 LINC00208Q96KT6 92 aa3.59□□□□□ -1.83
CKAP5-202ENST00000354558 NCOA6Q14686 2063 aaPredicted RBP3.59□□□□□ -1.83
CKAP5-202ENST00000354558 KLLNB2CW77 178 aa3.59□□□□□ -1.83
CKAP5-202ENST00000354558 V9GYY9 64 aa3.59□□□□□ -1.83
CKAP5-202ENST00000354558 DOCK11Q5JSL3 2073 aa3.59□□□□□ -1.83
CKAP5-202ENST00000354558 SRCAPQ6ZRS2 3230 aa3.59□□□□□ -1.83
CKAP5-202ENST00000354558 UTRNP46939 3433 aa3.59□□□□□ -1.83
CKAP5-202ENST00000354558 PRR3P79522 188 aaKnown RBP3.59□□□□□ -1.84
CKAP5-202ENST00000354558 BEAN1Q3B7T3 259 aa3.59□□□□□ -1.84
CKAP5-202ENST00000354558 ZFHX2Q9C0A1 2572 aaPredicted RBP3.59□□□□□ -1.84
CKAP5-202ENST00000354558 ATG2AQ2TAZ0 1938 aa3.58□□□□□ -1.84
CKAP5-202ENST00000354558 H0Y9P7 68 aa3.58□□□□□ -1.84
CKAP5-202ENST00000354558 DNAH10OSP0CZ25 163 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms