RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 OR10D4PQ8NGN7 298 aa8.87□□□□□ -0.99
PRPF40A-201ENST00000354363 NAT8Q9UHE5 227 aa8.87□□□□□ -0.99
PRPF40A-201ENST00000354363 C9JQL5 133 aa8.86□□□□□ -0.99
PRPF40A-201ENST00000354363 TCAPO15273 167 aa8.86□□□□□ -0.99
PRPF40A-201ENST00000354363 TNFRSF6BO95407 300 aa8.86□□□□□ -0.99
PRPF40A-201ENST00000354363 SMIM2Q9BVW6 85 aa8.86□□□□□ -0.99
PRPF40A-201ENST00000354363 IGHV3OR16-9A0A0B4J2B5 98 aa8.85□□□□□ -0.99
PRPF40A-201ENST00000354363 A0A1B0GW15 77 aa8.85□□□□□ -0.99
PRPF40A-201ENST00000354363 ORAOV1Q8WV07 137 aa8.85□□□□□ -0.99
PRPF40A-201ENST00000354363 SPANXA1Q9NS26 97 aa8.85□□□□□ -0.99
PRPF40A-201ENST00000354363 MRPL35Q9NZE8 188 aaKnown RBP8.85□□□□□ -0.99
PRPF40A-201ENST00000354363 D6R8Y8 96 aa8.84□□□□□ -0.99
PRPF40A-201ENST00000354363 C1orf137Q5JT78 98 aa8.84□□□□□ -0.99
PRPF40A-201ENST00000354363 F8WDY8 70 aa8.83□□□□□ -1
PRPF40A-201ENST00000354363 MRPS36P82909 103 aaKnown RBP8.83□□□□□ -1
PRPF40A-201ENST00000354363 NDUFA1O15239 70 aa8.83□□□□□ -1
PRPF40A-201ENST00000354363 NPYP01303 97 aa8.83□□□□□ -1
PRPF40A-201ENST00000354363 SRSF3P84103 164 aaKnown RBP8.83□□□□□ -1
PRPF40A-201ENST00000354363 C10orf25Q5T742 122 aa8.83□□□□□ -1
PRPF40A-201ENST00000354363 MRPL54Q6P161 138 aaKnown RBP8.83□□□□□ -1
PRPF40A-201ENST00000354363 IMMP2LQ96T52 175 aa8.83□□□□□ -1
PRPF40A-201ENST00000354363 A0A1B0GXF2 115 aa8.82□□□□□ -1
PRPF40A-201ENST00000354363 IFITM10A6NMD0 228 aa8.82□□□□□ -1
PRPF40A-201ENST00000354363 HBBP68871 147 aa8.82□□□□□ -1
PRPF40A-201ENST00000354363 FAM168BA1KXE4 195 aa8.81□□□□□ -1
PRPF40A-201ENST00000354363 F8W036 122 aa8.81□□□□□ -1
PRPF40A-201ENST00000354363 S100A8P05109 93 aa8.81□□□□□ -1
PRPF40A-201ENST00000354363 TLX1NBP0CAT3 122 aa8.81□□□□□ -1
PRPF40A-201ENST00000354363 PEA15Q15121 130 aa8.8□□□□□ -1
PRPF40A-201ENST00000354363 UNQ6190/PRO20217Q6UXQ8 127 aa8.8□□□□□ -1
PRPF40A-201ENST00000354363 KRTAP11-1Q8IUC1 163 aa8.8□□□□□ -1
PRPF40A-201ENST00000354363 C6orf48Q9UBA6 75 aa8.8□□□□□ -1
PRPF40A-201ENST00000354363 PPBPP02775 128 aa8.8□□□□□ -1
PRPF40A-201ENST00000354363 IGLV7-43P04211 117 aa8.8□□□□□ -1
PRPF40A-201ENST00000354363 LPAP08519 4548 aa8.78□□□□□ -1
PRPF40A-201ENST00000354363 A0A087WZ39 114 aa8.78□□□□□ -1
PRPF40A-201ENST00000354363 TGIF2-C20orf24A0A0A6YYL0 155 aa8.78□□□□□ -1
PRPF40A-201ENST00000354363 KIAA0087Q14695 138 aa8.78□□□□□ -1
PRPF40A-201ENST00000354363 GAGE2EQ4V326 116 aa8.78□□□□□ -1
PRPF40A-201ENST00000354363 FAM19A5Q7Z5A7 132 aaPredicted RBP8.78□□□□□ -1
PRPF40A-201ENST00000354363 DIRC1Q969H9 104 aa8.78□□□□□ -1
PRPF40A-201ENST00000354363 SMDT1Q9H4I9 107 aa8.78□□□□□ -1
PRPF40A-201ENST00000354363 GAGE2DQ9UEU5 116 aa8.78□□□□□ -1
PRPF40A-201ENST00000354363 IFI27P40305 119 aaPredicted RBP8.77□□□□□ -1.01
PRPF40A-201ENST00000354363 KRTAP7-1Q8IUC3 87 aa8.77□□□□□ -1.01
PRPF40A-201ENST00000354363 ORMDL3Q8N138 153 aa8.77□□□□□ -1.01
PRPF40A-201ENST00000354363 PRR26Q8N8Z3 221 aa8.77□□□□□ -1.01
PRPF40A-201ENST00000354363 IGLV4-3A0A075B6K6 122 aa8.76□□□□□ -1.01
PRPF40A-201ENST00000354363 RAB5AP20339 215 aa8.76□□□□□ -1.01
PRPF40A-201ENST00000354363 LINC00242Q5T6M2 205 aa8.76□□□□□ -1.01
PRPF40A-201ENST00000354363 TMEM136Q6ZRR5 245 aa8.76□□□□□ -1.01
PRPF40A-201ENST00000354363 PYGO1Q9Y3Y4 419 aa8.76□□□□□ -1.01
PRPF40A-201ENST00000354363 A0A1B0GVG6 124 aa8.76□□□□□ -1.01
PRPF40A-201ENST00000354363 H0Y9J4 135 aa8.76□□□□□ -1.01
PRPF40A-201ENST00000354363 PRELID3AQ96N28 172 aa8.76□□□□□ -1.01
PRPF40A-201ENST00000354363 ATP5L2Q7Z4Y8 100 aa8.75□□□□□ -1.01
PRPF40A-201ENST00000354363 TMEM141Q96I45 108 aa8.75□□□□□ -1.01
PRPF40A-201ENST00000354363 TRBV30A0A0K0K1B3 111 aa8.74□□□□□ -1.01
PRPF40A-201ENST00000354363 PRSS47A8MTI9 375 aa8.73□□□□□ -1.01
PRPF40A-201ENST00000354363 M0QXV9 152 aa8.73□□□□□ -1.01
PRPF40A-201ENST00000354363 C2orf82Q6UX34 121 aa8.73□□□□□ -1.01
PRPF40A-201ENST00000354363 UBE2D1P51668 147 aa8.72□□□□□ -1.01
PRPF40A-201ENST00000354363 LOC389332A0A1B0GUA5 103 aa8.72□□□□□ -1.01
PRPF40A-201ENST00000354363 NDUFC2-KCTD14E9PQ53 114 aa8.72□□□□□ -1.01
PRPF40A-201ENST00000354363 UBE2BP63146 152 aa8.72□□□□□ -1.01
PRPF40A-201ENST00000354363 C9orf129Q5T035 196 aaKnown RBP8.72□□□□□ -1.01
PRPF40A-201ENST00000354363 TEX43Q6ZNM6 134 aa8.72□□□□□ -1.01
PRPF40A-201ENST00000354363 LINC01561Q8N1V8 128 aa8.72□□□□□ -1.01
PRPF40A-201ENST00000354363 IGLV1-50A0A075B6I6 118 aa8.71□□□□□ -1.02
PRPF40A-201ENST00000354363 KRTAP1-4P0C5Y4 121 aa8.71□□□□□ -1.02
PRPF40A-201ENST00000354363 ZC2HC1BQ5TFG8 222 aa8.71□□□□□ -1.02
PRPF40A-201ENST00000354363 LINC00173Q6ZV60 143 aa8.71□□□□□ -1.02
PRPF40A-201ENST00000354363 PACRGQ96M98 296 aaPredicted RBP8.71□□□□□ -1.02
PRPF40A-201ENST00000354363 MAP1LC3AQ9H492 121 aa8.71□□□□□ -1.02
PRPF40A-201ENST00000354363 LAMTOR2Q9Y2Q5 125 aa8.71□□□□□ -1.02
PRPF40A-201ENST00000354363 C2orf88Q9BSF0 95 aa8.7□□□□□ -1.02
PRPF40A-201ENST00000354363 C2orf66Q6UXQ4 117 aa8.69□□□□□ -1.02
PRPF40A-201ENST00000354363 Q8N8P6 123 aa8.69□□□□□ -1.02
PRPF40A-201ENST00000354363 AMELXQ99217 191 aa8.69□□□□□ -1.02
PRPF40A-201ENST00000354363 CYSLTR1Q9Y271 337 aa8.69□□□□□ -1.02
PRPF40A-201ENST00000354363 Q6ZN92 141 aa8.68□□□□□ -1.02
PRPF40A-201ENST00000354363 VCX2Q9H322 139 aa8.67□□□□□ -1.02
PRPF40A-201ENST00000354363 TOMM7Q9P0U1 55 aa8.67□□□□□ -1.02
PRPF40A-201ENST00000354363 PRSS2P07478 247 aa8.66□□□□□ -1.02
PRPF40A-201ENST00000354363 ORMDL2Q53FV1 153 aa8.66□□□□□ -1.02
PRPF40A-201ENST00000354363 FAM19A3Q7Z5A8 133 aa8.66□□□□□ -1.02
PRPF40A-201ENST00000354363 IGIPA6NJ69 53 aa8.65□□□□□ -1.02
PRPF40A-201ENST00000354363 NPSP0C0P6 89 aa8.65□□□□□ -1.02
PRPF40A-201ENST00000354363 CKS1BP61024 79 aa8.65□□□□□ -1.02
PRPF40A-201ENST00000354363 Q8IZM0 81 aa8.65□□□□□ -1.02
PRPF40A-201ENST00000354363 LINC00469Q8N7U9 141 aa8.65□□□□□ -1.02
PRPF40A-201ENST00000354363 ANAPC16Q96DE5 110 aa8.65□□□□□ -1.02
PRPF40A-201ENST00000354363 PNRC1Q12796 327 aaPredicted RBP8.65□□□□□ -1.03
PRPF40A-201ENST00000354363 C6orf226Q5I0X4 101 aa8.65□□□□□ -1.03
PRPF40A-201ENST00000354363 K7EMI3 77 aa8.64□□□□□ -1.03
PRPF40A-201ENST00000354363 MT-ND4LP03901 98 aa8.64□□□□□ -1.03
PRPF40A-201ENST00000354363 C22orf24Q9Y442 160 aa8.64□□□□□ -1.03
PRPF40A-201ENST00000354363 ZNF861PO60384 105 aa8.63□□□□□ -1.03
PRPF40A-201ENST00000354363 RPL13AP40429 203 aaKnown RBP8.63□□□□□ -1.03
PRPF40A-201ENST00000354363 ALKBH7Q9BT30 221 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms