RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ORMDL1Q9P0S3 153 aa9.9□□□□□ -0.82
SMC6-201ENST00000351948 COL27A1Q8IZC6 1860 aaPredicted RBP9.9□□□□□ -0.82
SMC6-201ENST00000351948 HIGD1BQ9P298 99 aa9.89□□□□□ -0.83
SMC6-201ENST00000351948 TMEM223A0PJW6 202 aa9.88□□□□□ -0.83
SMC6-201ENST00000351948 C15orf53Q8NAA6 179 aa9.88□□□□□ -0.83
SMC6-201ENST00000351948 UBE2D4Q9Y2X8 147 aa9.88□□□□□ -0.83
SMC6-201ENST00000351948 CNFNQ9BYD5 112 aa9.88□□□□□ -0.83
SMC6-201ENST00000351948 UBE2D3P61077 147 aa9.88□□□□□ -0.83
SMC6-201ENST00000351948 UBE2D2P62837 147 aa9.88□□□□□ -0.83
SMC6-201ENST00000351948 KRTAP24-1Q3LI83 254 aa9.88□□□□□ -0.83
SMC6-201ENST00000351948 Q8N2B8 174 aa9.87□□□□□ -0.83
SMC6-201ENST00000351948 UBL5Q9BZL1 73 aa9.87□□□□□ -0.83
SMC6-201ENST00000351948 MIAQ16674 131 aa9.87□□□□□ -0.83
SMC6-201ENST00000351948 Q6ZSN1 163 aa9.87□□□□□ -0.83
SMC6-201ENST00000351948 RNASE8Q8TDE3 154 aaKnown RBP9.87□□□□□ -0.83
SMC6-201ENST00000351948 LELP1Q5T871 98 aa9.87□□□□□ -0.83
SMC6-201ENST00000351948 HIGD2AQ9BW72 106 aa9.86□□□□□ -0.83
SMC6-201ENST00000351948 hADV29S1A0JD25 119 aa9.86□□□□□ -0.83
SMC6-201ENST00000351948 RPL32P62910 135 aaKnown RBP9.86□□□□□ -0.83
SMC6-201ENST00000351948 MUC4Q99102 2169 aa9.86□□□□□ -0.83
SMC6-201ENST00000351948 H7C423 109 aa9.86□□□□□ -0.83
SMC6-201ENST00000351948 LINC00959A0A1B0GUT2 108 aa9.86□□□□□ -0.83
SMC6-201ENST00000351948 LRCOL1A6NCL2 159 aa9.86□□□□□ -0.83
SMC6-201ENST00000351948 TAX1BP3O14907 124 aa9.86□□□□□ -0.83
SMC6-201ENST00000351948 FAM19A5Q7Z5A7 132 aaPredicted RBP9.86□□□□□ -0.83
SMC6-201ENST00000351948 A0A096LNI7 61 aa9.85□□□□□ -0.83
SMC6-201ENST00000351948 UFSP1Q6NVU6 142 aa9.85□□□□□ -0.83
SMC6-201ENST00000351948 EYSQ5T1H1 3165 aa9.85□□□□□ -0.83
SMC6-201ENST00000351948 DIRC1Q969H9 104 aa9.85□□□□□ -0.83
SMC6-201ENST00000351948 H0YGX0 51 aa9.84□□□□□ -0.83
SMC6-201ENST00000351948 LINC00694P0DN24 101 aa9.84□□□□□ -0.83
SMC6-201ENST00000351948 LINC00310P59036 64 aa9.84□□□□□ -0.83
SMC6-201ENST00000351948 WFDC2Q14508 124 aa9.84□□□□□ -0.83
SMC6-201ENST00000351948 RBMY1FQ15415 496 aaKnown RBP9.84□□□□□ -0.83
SMC6-201ENST00000351948 URB1-AS1Q96HZ7 61 aa9.84□□□□□ -0.83
SMC6-201ENST00000351948 SYCNQ0VAF6 134 aa9.84□□□□□ -0.83
SMC6-201ENST00000351948 LINC01620Q4KN68 170 aa9.84□□□□□ -0.83
SMC6-201ENST00000351948 PYGO1Q9Y3Y4 419 aa9.84□□□□□ -0.83
SMC6-201ENST00000351948 ANKRD29Q8N6D5 301 aa9.83□□□□□ -0.84
SMC6-201ENST00000351948 FHL2Q14192 279 aa9.83□□□□□ -0.84
SMC6-201ENST00000351948 CD164L2Q6UWJ8 174 aa9.82□□□□□ -0.84
SMC6-201ENST00000351948 A0A087WZ39 114 aa9.82□□□□□ -0.84
SMC6-201ENST00000351948 PTH2Q96A98 100 aa9.82□□□□□ -0.84
SMC6-201ENST00000351948 SPANXCQ9NY87 97 aa9.82□□□□□ -0.84
SMC6-201ENST00000351948 IGLV4-60A0A075B6I1 120 aa9.82□□□□□ -0.84
SMC6-201ENST00000351948 PKIGQ9Y2B9 76 aa9.82□□□□□ -0.84
SMC6-201ENST00000351948 C14orf177Q52M58 125 aa9.81□□□□□ -0.84
SMC6-201ENST00000351948 CDC42SE2Q9NRR3 84 aa9.81□□□□□ -0.84
SMC6-201ENST00000351948 LINC00308Q8TCZ7 52 aa9.81□□□□□ -0.84
SMC6-201ENST00000351948 SETXQ7Z333 2677 aaKnown RBP9.81□□□□□ -0.84
SMC6-201ENST00000351948 IGKV2-28A0A075B6P5 120 aa9.8□□□□□ -0.84
SMC6-201ENST00000351948 IGKV2D-28P01615 120 aa9.8□□□□□ -0.84
SMC6-201ENST00000351948 UBE2D1P51668 147 aa9.79□□□□□ -0.84
SMC6-201ENST00000351948 IGIPA6NJ69 53 aa9.79□□□□□ -0.84
SMC6-201ENST00000351948 CELA1Q9UNI1 258 aa9.79□□□□□ -0.84
SMC6-201ENST00000351948 FRYLO94915 3013 aa9.78□□□□□ -0.84
SMC6-201ENST00000351948 SLPIP03973 132 aa9.78□□□□□ -0.84
SMC6-201ENST00000351948 COX7BP24311 80 aa9.78□□□□□ -0.84
SMC6-201ENST00000351948 IBA57-AS1B1ANH7 110 aa9.78□□□□□ -0.84
SMC6-201ENST00000351948 FSHBP01225 129 aa9.78□□□□□ -0.84
SMC6-201ENST00000351948 LINC00242Q5T6M2 205 aa9.77□□□□□ -0.84
SMC6-201ENST00000351948 BEAN1Q3B7T3 259 aa9.77□□□□□ -0.85
SMC6-201ENST00000351948 IGSF10Q6WRI0 2623 aa9.77□□□□□ -0.85
SMC6-201ENST00000351948 FUSP35637 526 aaKnown RBP eCLIP9.77□□□□□ -0.85
SMC6-201ENST00000351948 CHCHD7Q9BUK0 85 aa9.77□□□□□ -0.85
SMC6-201ENST00000351948 TRACP01848 142 aa9.77□□□□□ -0.85
SMC6-201ENST00000351948 COX8CQ7Z4L0 72 aa9.77□□□□□ -0.85
SMC6-201ENST00000351948 FAM19A1Q7Z5A9 133 aa9.77□□□□□ -0.85
SMC6-201ENST00000351948 FHL3Q13643 280 aa9.76□□□□□ -0.85
SMC6-201ENST00000351948 C9orf116Q5BN46 136 aaPredicted RBP9.76□□□□□ -0.85
SMC6-201ENST00000351948 IGLV4-69A0A075B6H9 119 aa9.76□□□□□ -0.85
SMC6-201ENST00000351948 C9orf153Q5TBE3 101 aa9.76□□□□□ -0.85
SMC6-201ENST00000351948 TCL1BO95988 128 aa9.76□□□□□ -0.85
SMC6-201ENST00000351948 WFDC10BQ8IUB3 73 aa9.75□□□□□ -0.85
SMC6-201ENST00000351948 POM121L12Q8N7R1 296 aa9.75□□□□□ -0.85
SMC6-201ENST00000351948 COX6A2Q02221 97 aa9.75□□□□□ -0.85
SMC6-201ENST00000351948 NDUFS5O43920 106 aa9.75□□□□□ -0.85
SMC6-201ENST00000351948 MRPS36P82909 103 aaKnown RBP9.75□□□□□ -0.85
SMC6-201ENST00000351948 FOXI1Q12951 378 aa9.75□□□□□ -0.85
SMC6-201ENST00000351948 UNQ6190/PRO20217Q6UXQ8 127 aa9.75□□□□□ -0.85
SMC6-201ENST00000351948 CYSRT1A8MQ03 144 aa9.74□□□□□ -0.85
SMC6-201ENST00000351948 BOD1L1Q8NFC6 3051 aa9.74□□□□□ -0.85
SMC6-201ENST00000351948 C6orf99Q4VX62 202 aa9.74□□□□□ -0.85
SMC6-201ENST00000351948 RPL37AP8A6NKH3 93 aa9.74□□□□□ -0.85
SMC6-201ENST00000351948 IGKV3D-7A0A0C4DH55 119 aa9.73□□□□□ -0.85
SMC6-201ENST00000351948 A0A096LNT2 108 aa9.73□□□□□ -0.85
SMC6-201ENST00000351948 SPEGQ15772 3267 aa9.73□□□□□ -0.85
SMC6-201ENST00000351948 C11orf72Q8NBR9 251 aa9.73□□□□□ -0.85
SMC6-201ENST00000351948 FREM2Q5SZK8 3169 aa9.72□□□□□ -0.85
SMC6-201ENST00000351948 Q9UF83 564 aa9.72□□□□□ -0.85
SMC6-201ENST00000351948 C14orf132Q9NPU4 83 aa9.72□□□□□ -0.85
SMC6-201ENST00000351948 TEN1Q86WV5 123 aa9.72□□□□□ -0.85
SMC6-201ENST00000351948 A0A096LNJ9 63 aa9.71□□□□□ -0.85
SMC6-201ENST00000351948 FRYQ5TBA9 3013 aa9.71□□□□□ -0.85
SMC6-201ENST00000351948 A0A0B4J2C4 111 aa9.71□□□□□ -0.86
SMC6-201ENST00000351948 C2orf91Q6ZV80 131 aa9.71□□□□□ -0.86
SMC6-201ENST00000351948 CHD6Q8TD26 2715 aa9.71□□□□□ -0.86
SMC6-201ENST00000351948 TRBV10-2A0A0K0K1G8 114 aa9.7□□□□□ -0.86
SMC6-201ENST00000351948 TRIAP1O43715 76 aa9.7□□□□□ -0.86
SMC6-201ENST00000351948 PPDPFQ9H3Y8 114 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms