RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 IGKV3OR2-268A0A0C4DH90 116 aa7.44□□□□□ -1.22
ECM1-201ENST00000346569 IGLV5-39A0A0G2JS06 123 aa7.44□□□□□ -1.22
ECM1-201ENST00000346569 H3BRM9 83 aa7.44□□□□□ -1.22
ECM1-201ENST00000346569 J3QQQ9 107 aa7.44□□□□□ -1.22
ECM1-201ENST00000346569 IGHV3-30-3P0DP02 117 aa7.44□□□□□ -1.22
ECM1-201ENST00000346569 TSPEAR-AS2P59090 65 aa7.44□□□□□ -1.22
ECM1-201ENST00000346569 REG3AQ06141 175 aa7.44□□□□□ -1.22
ECM1-201ENST00000346569 SS18Q15532 418 aa7.44□□□□□ -1.22
ECM1-201ENST00000346569 ENHOQ6UWT2 76 aa7.44□□□□□ -1.22
ECM1-201ENST00000346569 APLNQ9ULZ1 77 aa7.44□□□□□ -1.22
ECM1-201ENST00000346569 LINC00588Q9Y4M8 146 aa7.44□□□□□ -1.22
ECM1-201ENST00000346569 SACSQ9NZJ4 4579 aa7.44□□□□□ -1.22
ECM1-201ENST00000346569 SPINK8P0C7L1 97 aa7.44□□□□□ -1.22
ECM1-201ENST00000346569 HNRNPA3P51991 378 aaKnown RBP7.44□□□□□ -1.22
ECM1-201ENST00000346569 CTAG1AP78358 180 aa7.44□□□□□ -1.22
ECM1-201ENST00000346569 LINC01556Q5JQF7 62 aa7.44□□□□□ -1.22
ECM1-201ENST00000346569 PLEKHB2Q96CS7 222 aa7.44□□□□□ -1.22
ECM1-201ENST00000346569 KLK12Q9UKR0 248 aa7.44□□□□□ -1.22
ECM1-201ENST00000346569 A0A087WZ39 114 aa7.43□□□□□ -1.22
ECM1-201ENST00000346569 MYMXA0A1B0GTQ4 84 aa7.43□□□□□ -1.22
ECM1-201ENST00000346569 SMIM1B2RUZ4 78 aa7.43□□□□□ -1.22
ECM1-201ENST00000346569 IGHV3-30P01768 117 aa7.43□□□□□ -1.22
ECM1-201ENST00000346569 IGHV3-33P01772 117 aa7.43□□□□□ -1.22
ECM1-201ENST00000346569 DNAH10OSP0CZ25 163 aa7.43□□□□□ -1.22
ECM1-201ENST00000346569 IGHV3-30-5P0DP03 117 aa7.43□□□□□ -1.22
ECM1-201ENST00000346569 HIGD1BQ9P298 99 aa7.43□□□□□ -1.22
ECM1-201ENST00000346569 IGHV3-64A0A075B6Q5 118 aa7.42□□□□□ -1.22
ECM1-201ENST00000346569 CCL18P55774 89 aa7.42□□□□□ -1.22
ECM1-201ENST00000346569 CLPSL2Q6UWE3 100 aa7.42□□□□□ -1.22
ECM1-201ENST00000346569 CD164L2Q6UWJ8 174 aa7.42□□□□□ -1.22
ECM1-201ENST00000346569 LINC01561Q8N1V8 128 aa7.42□□□□□ -1.22
ECM1-201ENST00000346569 UPK3BQ9BT76 320 aa7.42□□□□□ -1.22
ECM1-201ENST00000346569 CHCHD10Q8WYQ3 142 aaPredicted RBP7.41□□□□□ -1.22
ECM1-201ENST00000346569 LYSTQ99698 3801 aa7.41□□□□□ -1.22
ECM1-201ENST00000346569 TRAV8-4A0A0B4J246 113 aa7.4□□□□□ -1.22
ECM1-201ENST00000346569 ZNF815PA8K554 130 aa7.4□□□□□ -1.22
ECM1-201ENST00000346569 LGALS3P17931 250 aaKnown RBP7.4□□□□□ -1.22
ECM1-201ENST00000346569 XCL1P47992 114 aa7.4□□□□□ -1.22
ECM1-201ENST00000346569 C5orf38Q86SI9 138 aa7.4□□□□□ -1.22
ECM1-201ENST00000346569 CSMD3Q7Z407 3707 aa7.4□□□□□ -1.22
ECM1-201ENST00000346569 STARD9Q9P2P6 4700 aa7.4□□□□□ -1.23
ECM1-201ENST00000346569 IGLV10-54A0A075B6I4 117 aa7.39□□□□□ -1.23
ECM1-201ENST00000346569 NUPR2A6NF83 97 aa7.39□□□□□ -1.23
ECM1-201ENST00000346569 FOXI1Q12951 378 aa7.39□□□□□ -1.23
ECM1-201ENST00000346569 ZFAND6Q6FIF0 208 aa7.39□□□□□ -1.23
ECM1-201ENST00000346569 KRTAP26-1Q6PEX3 210 aa7.39□□□□□ -1.23
ECM1-201ENST00000346569 UBE2WQ96B02 151 aa7.39□□□□□ -1.23
ECM1-201ENST00000346569 MIAQ16674 131 aa7.38□□□□□ -1.23
ECM1-201ENST00000346569 SNHG12Q9BXW3 62 aa7.38□□□□□ -1.23
ECM1-201ENST00000346569 NDUFA12Q9UI09 145 aa7.38□□□□□ -1.23
ECM1-201ENST00000346569 KLK5Q9Y337 293 aaPredicted RBP7.38□□□□□ -1.23
ECM1-201ENST00000346569 PLECQ15149 4684 aaKnown RBP7.38□□□□□ -1.23
ECM1-201ENST00000346569 IBA57-AS1B1ANH7 110 aa7.37□□□□□ -1.23
ECM1-201ENST00000346569 M0R143 59 aa7.37□□□□□ -1.23
ECM1-201ENST00000346569 C10orf126Q8N4M7 172 aa7.37□□□□□ -1.23
ECM1-201ENST00000346569 Q9H8V8 135 aa7.37□□□□□ -1.23
ECM1-201ENST00000346569 A0A0J9YXY3 114 aa7.36□□□□□ -1.23
ECM1-201ENST00000346569 GAGE12HA6NDE8 117 aa7.36□□□□□ -1.23
ECM1-201ENST00000346569 ZNF625Q96I27 306 aaPredicted RBP7.36□□□□□ -1.23
ECM1-201ENST00000346569 COX7A2LO14548 114 aa7.35□□□□□ -1.23
ECM1-201ENST00000346569 NDUFA1O15239 70 aa7.35□□□□□ -1.23
ECM1-201ENST00000346569 CRPP02741 224 aa7.35□□□□□ -1.23
ECM1-201ENST00000346569 HINT1P49773 126 aaPredicted RBP7.35□□□□□ -1.23
ECM1-201ENST00000346569 KIAA0087Q14695 138 aa7.35□□□□□ -1.23
ECM1-201ENST00000346569 TAL2Q16559 108 aa7.35□□□□□ -1.23
ECM1-201ENST00000346569 BVES-AS1Q5T3Y7 98 aa7.35□□□□□ -1.23
ECM1-201ENST00000346569 COX7B2Q8TF08 81 aa7.35□□□□□ -1.23
ECM1-201ENST00000346569 EREGO14944 169 aa7.35□□□□□ -1.23
ECM1-201ENST00000346569 HSD52Q0P140 79 aa7.35□□□□□ -1.23
ECM1-201ENST00000346569 SCGB1D4Q6XE38 83 aa7.35□□□□□ -1.23
ECM1-201ENST00000346569 SPANXB1Q9NS25 103 aaPredicted RBP7.35□□□□□ -1.23
ECM1-201ENST00000346569 RYR2Q92736 4967 aa7.34□□□□□ -1.23
ECM1-201ENST00000346569 DNAH1Q9P2D7 4330 aa7.34□□□□□ -1.23
ECM1-201ENST00000346569 K7EP13 123 aa7.34□□□□□ -1.23
ECM1-201ENST00000346569 Q8IZM0 81 aa7.34□□□□□ -1.23
ECM1-201ENST00000346569 WWC2-AS2Q96NR7 200 aa7.34□□□□□ -1.23
ECM1-201ENST00000346569 LITAFQ99732 161 aa7.34□□□□□ -1.23
ECM1-201ENST00000346569 TM2D2Q9BX73 214 aa7.34□□□□□ -1.23
ECM1-201ENST00000346569 C6orf226Q5I0X4 101 aa7.33□□□□□ -1.24
ECM1-201ENST00000346569 TOMM7Q9P0U1 55 aa7.33□□□□□ -1.24
ECM1-201ENST00000346569 TIMM17BO60830 172 aa7.32□□□□□ -1.24
ECM1-201ENST00000346569 HERV-K104P63124 156 aa7.32□□□□□ -1.24
ECM1-201ENST00000346569 ADAMTSL4-AS1Q5T5F5 129 aa7.32□□□□□ -1.24
ECM1-201ENST00000346569 CEND1Q8N111 149 aa7.32□□□□□ -1.24
ECM1-201ENST00000346569 ORAOV1Q8WV07 137 aa7.32□□□□□ -1.24
ECM1-201ENST00000346569 HIST1H4GQ99525 98 aa7.32□□□□□ -1.24
ECM1-201ENST00000346569 MALP21145 153 aa7.31□□□□□ -1.24
ECM1-201ENST00000346569 LBHQ53QV2 105 aaPredicted RBP7.31□□□□□ -1.24
ECM1-201ENST00000346569 MUC7Q8TAX7 377 aa7.31□□□□□ -1.24
ECM1-201ENST00000346569 C1orf43Q9BWL3 253 aa7.31□□□□□ -1.24
ECM1-201ENST00000346569 APOMO95445 188 aa7.3□□□□□ -1.24
ECM1-201ENST00000346569 FXYD2P54710 66 aa7.3□□□□□ -1.24
ECM1-201ENST00000346569 SRSF9Q13242 221 aaKnown RBP eCLIP7.3□□□□□ -1.24
ECM1-201ENST00000346569 BATFQ16520 125 aa7.3□□□□□ -1.24
ECM1-201ENST00000346569 UBE2DNLQ8IWF7 75 aa7.3□□□□□ -1.24
ECM1-201ENST00000346569 VPS13DQ5THJ4 4388 aa7.3□□□□□ -1.24
ECM1-201ENST00000346569 IGKV2D-24A0A075B6R9 120 aa7.29□□□□□ -1.24
ECM1-201ENST00000346569 TMEM238C9JI98 176 aa7.29□□□□□ -1.24
ECM1-201ENST00000346569 PTTG1IPP53801 180 aa7.29□□□□□ -1.24
ECM1-201ENST00000346569 SFTA2Q6UW10 78 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms