RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 CAMK2N2Q96S95 79 aa10.11□□□□□ -0.79
TSPAN4-201ENST00000346501 OPRPNQ99935 248 aaPredicted RBP10.11□□□□□ -0.79
TSPAN4-201ENST00000346501 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.11□□□□□ -0.79
TSPAN4-201ENST00000346501 LINC01549A6NIU2 74 aa10.1□□□□□ -0.79
TSPAN4-201ENST00000346501 SNAPINO95295 136 aa10.1□□□□□ -0.79
TSPAN4-201ENST00000346501 APOC3P02656 99 aa10.1□□□□□ -0.79
TSPAN4-201ENST00000346501 NPSP0C0P6 89 aa10.1□□□□□ -0.79
TSPAN4-201ENST00000346501 VCX2Q9H322 139 aa10.1□□□□□ -0.79
TSPAN4-201ENST00000346501 IGLV4-69A0A075B6H9 119 aa10.09□□□□□ -0.79
TSPAN4-201ENST00000346501 IGLV4-3A0A075B6K6 122 aa10.09□□□□□ -0.79
TSPAN4-201ENST00000346501 IGKV2-24A0A0C4DH68 120 aa10.09□□□□□ -0.79
TSPAN4-201ENST00000346501 FABP9Q0Z7S8 132 aa10.09□□□□□ -0.79
TSPAN4-201ENST00000346501 CIRBPQ14011 172 aaKnown RBP10.09□□□□□ -0.79
TSPAN4-201ENST00000346501 MAJINQ3KP22 176 aa10.09□□□□□ -0.79
TSPAN4-201ENST00000346501 SVBPQ8N300 66 aa10.09□□□□□ -0.79
TSPAN4-201ENST00000346501 OR10D4PQ8NGN7 298 aa10.09□□□□□ -0.79
TSPAN4-201ENST00000346501 LINC00526Q96FQ7 95 aa10.09□□□□□ -0.79
TSPAN4-201ENST00000346501 RPL37AP61513 92 aaKnown RBP10.08□□□□□ -0.8
TSPAN4-201ENST00000346501 SPAG11BQ08648 103 aa10.08□□□□□ -0.8
TSPAN4-201ENST00000346501 SPACA4Q8TDM5 124 aa10.08□□□□□ -0.8
TSPAN4-201ENST00000346501 C2orf48Q96LS8 159 aa10.08□□□□□ -0.8
TSPAN4-201ENST00000346501 A0A087WYN8 130 aa10.07□□□□□ -0.8
TSPAN4-201ENST00000346501 F8WDY8 70 aa10.07□□□□□ -0.8
TSPAN4-201ENST00000346501 CHTF8P0CG12 524 aa10.07□□□□□ -0.8
TSPAN4-201ENST00000346501 C7orf33Q8WU49 177 aa10.07□□□□□ -0.8
TSPAN4-201ENST00000346501 ORAOV1Q8WV07 137 aa10.07□□□□□ -0.8
TSPAN4-201ENST00000346501 MRPL18Q9H0U6 180 aaKnown RBP10.07□□□□□ -0.8
TSPAN4-201ENST00000346501 SMCO4Q9NRQ5 59 aa10.07□□□□□ -0.8
TSPAN4-201ENST00000346501 IGHV3OR16-9A0A0B4J2B5 98 aa10.06□□□□□ -0.8
TSPAN4-201ENST00000346501 LOC107984640A0A0U1RRK4 108 aa10.06□□□□□ -0.8
TSPAN4-201ENST00000346501 SEC11AP67812 179 aa10.06□□□□□ -0.8
TSPAN4-201ENST00000346501 FA2HQ7L5A8 372 aa10.06□□□□□ -0.8
TSPAN4-201ENST00000346501 PANO1I0J062 215 aa10.05□□□□□ -0.8
TSPAN4-201ENST00000346501 ALKBH7Q9BT30 221 aaPredicted RBP10.05□□□□□ -0.8
TSPAN4-201ENST00000346501 NDUFA1O15239 70 aa10.04□□□□□ -0.8
TSPAN4-201ENST00000346501 STPG4Q8N801 248 aa10.04□□□□□ -0.8
TSPAN4-201ENST00000346501 FAM104AQ969W3 186 aa10.04□□□□□ -0.8
TSPAN4-201ENST00000346501 SCGB3A1Q96QR1 104 aa10.04□□□□□ -0.8
TSPAN4-201ENST00000346501 TIMM17AQ99595 171 aa10.04□□□□□ -0.8
TSPAN4-201ENST00000346501 PLAC8Q9NZF1 115 aa10.04□□□□□ -0.8
TSPAN4-201ENST00000346501 TRAPPC1Q9Y5R8 145 aa10.04□□□□□ -0.8
TSPAN4-201ENST00000346501 A0A087WZ39 114 aa10.03□□□□□ -0.8
TSPAN4-201ENST00000346501 LINC00242Q5T6M2 205 aa10.03□□□□□ -0.8
TSPAN4-201ENST00000346501 Q6ZRU5 148 aa10.03□□□□□ -0.8
TSPAN4-201ENST00000346501 TOMM6Q96B49 74 aa10.03□□□□□ -0.8
TSPAN4-201ENST00000346501 A0A096LNI7 61 aa10.02□□□□□ -0.81
TSPAN4-201ENST00000346501 IGIPA6NJ69 53 aa10.02□□□□□ -0.81
TSPAN4-201ENST00000346501 UBE2D1P51668 147 aa10.02□□□□□ -0.81
TSPAN4-201ENST00000346501 GAGE2BQ13066 116 aa10.02□□□□□ -0.81
TSPAN4-201ENST00000346501 RNF151Q2KHN1 245 aa10.02□□□□□ -0.81
TSPAN4-201ENST00000346501 ERASQ7Z444 233 aa10.02□□□□□ -0.81
TSPAN4-201ENST00000346501 AMELXQ99217 191 aa10.02□□□□□ -0.81
TSPAN4-201ENST00000346501 GEMIN7Q9H840 131 aaKnown RBP10.02□□□□□ -0.81
TSPAN4-201ENST00000346501 J3QL48 77 aa10.01□□□□□ -0.81
TSPAN4-201ENST00000346501 PRSS2P07478 247 aa10.01□□□□□ -0.81
TSPAN4-201ENST00000346501 HERVK_113P63121 156 aa10.01□□□□□ -0.81
TSPAN4-201ENST00000346501 LINC01561Q8N1V8 128 aa10.01□□□□□ -0.81
TSPAN4-201ENST00000346501 PACRGQ96M98 296 aaPredicted RBP10.01□□□□□ -0.81
TSPAN4-201ENST00000346501 RPL18AQ02543 176 aaKnown RBP10□□□□□ -0.81
TSPAN4-201ENST00000346501 MRPL35Q9NZE8 188 aaKnown RBP10□□□□□ -0.81
TSPAN4-201ENST00000346501 PTTG1IPP53801 180 aa9.99□□□□□ -0.81
TSPAN4-201ENST00000346501 FLG2Q5D862 2391 aaPredicted RBP9.99□□□□□ -0.81
TSPAN4-201ENST00000346501 DNAH8Q96JB1 4490 aa9.98□□□□□ -0.81
TSPAN4-201ENST00000346501 RAB5BP61020 215 aa9.98□□□□□ -0.81
TSPAN4-201ENST00000346501 FAT1Q14517 4588 aa9.98□□□□□ -0.81
TSPAN4-201ENST00000346501 SRRM2Q9UQ35 2752 aaKnown RBP9.97□□□□□ -0.81
TSPAN4-201ENST00000346501 LINC01546A6NGU7 62 aa9.97□□□□□ -0.81
TSPAN4-201ENST00000346501 CKS1BP61024 79 aa9.97□□□□□ -0.81
TSPAN4-201ENST00000346501 ZC2HC1BQ5TFG8 222 aa9.97□□□□□ -0.81
TSPAN4-201ENST00000346501 LINC00173Q6ZV60 143 aa9.97□□□□□ -0.81
TSPAN4-201ENST00000346501 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.96□□□□□ -0.82
TSPAN4-201ENST00000346501 C6orf226Q5I0X4 101 aa9.96□□□□□ -0.82
TSPAN4-201ENST00000346501 FAM19A3Q7Z5A8 133 aa9.96□□□□□ -0.82
TSPAN4-201ENST00000346501 TOMM7Q9P0U1 55 aa9.96□□□□□ -0.82
TSPAN4-201ENST00000346501 TRBV30A0A0K0K1B3 111 aa9.95□□□□□ -0.82
TSPAN4-201ENST00000346501 LINC00614P0C842 121 aa9.95□□□□□ -0.82
TSPAN4-201ENST00000346501 UNQ6190/PRO20217Q6UXQ8 127 aa9.95□□□□□ -0.82
TSPAN4-201ENST00000346501 A0A0J9YXV3 536 aa9.94□□□□□ -0.82
TSPAN4-201ENST00000346501 LINC00469Q8N7U9 141 aa9.94□□□□□ -0.82
TSPAN4-201ENST00000346501 KRTAP10-4P60372 401 aaPredicted RBP9.93□□□□□ -0.82
TSPAN4-201ENST00000346501 PMVKQ15126 192 aa9.93□□□□□ -0.82
TSPAN4-201ENST00000346501 C18orf32Q8TCD1 76 aa9.93□□□□□ -0.82
TSPAN4-201ENST00000346501 DMBT1Q9UGM3 2413 aaPredicted RBP9.93□□□□□ -0.82
TSPAN4-201ENST00000346501 TINCRA0A1B0GVN0 87 aa9.92□□□□□ -0.82
TSPAN4-201ENST00000346501 KRTAP29-1A8MX34 341 aaPredicted RBP9.92□□□□□ -0.82
TSPAN4-201ENST00000346501 OXTP01178 125 aa9.92□□□□□ -0.82
TSPAN4-201ENST00000346501 HBDP02042 147 aa9.92□□□□□ -0.82
TSPAN4-201ENST00000346501 TLX1NBP0CAT3 122 aa9.92□□□□□ -0.82
TSPAN4-201ENST00000346501 Q8IZM0 81 aa9.92□□□□□ -0.82
TSPAN4-201ENST00000346501 CDKN2A-AS1Q9UH64 79 aa9.92□□□□□ -0.82
TSPAN4-201ENST00000346501 H3BRM9 83 aa9.91□□□□□ -0.82
TSPAN4-201ENST00000346501 CXCL5P42830 114 aa9.91□□□□□ -0.82
TSPAN4-201ENST00000346501 NDUFA6P56556 154 aa9.91□□□□□ -0.82
TSPAN4-201ENST00000346501 KIAA0087Q14695 138 aa9.91□□□□□ -0.82
TSPAN4-201ENST00000346501 C9orf116Q5BN46 136 aaPredicted RBP9.91□□□□□ -0.82
TSPAN4-201ENST00000346501 CST9LQ9H4G1 147 aa9.91□□□□□ -0.82
TSPAN4-201ENST00000346501 C6orf48Q9UBA6 75 aa9.91□□□□□ -0.82
TSPAN4-201ENST00000346501 ATP5LO75964 103 aa9.9□□□□□ -0.82
TSPAN4-201ENST00000346501 GAGE2EQ4V326 116 aa9.9□□□□□ -0.82
TSPAN4-201ENST00000346501 C10orf25Q5T742 122 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 240 ms