RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 IGLV11-55A0A075B6I3 123 aa4.65□□□□□ -1.67
VCAN-203ENST00000343200 MAPKAPK5-AS1Q8N8E1 139 aa4.65□□□□□ -1.67
VCAN-203ENST00000343200 TMEM89A2RUT3 159 aa4.64□□□□□ -1.67
VCAN-203ENST00000343200 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
VCAN-203ENST00000343200 ZNF22P17026 224 aaPredicted RBP4.64□□□□□ -1.67
VCAN-203ENST00000343200 IGLV4-3A0A075B6K6 122 aa4.64□□□□□ -1.67
VCAN-203ENST00000343200 IGLV3-1P01715 115 aa4.64□□□□□ -1.67
VCAN-203ENST00000343200 PLA2G2EQ9NZK7 142 aa4.64□□□□□ -1.67
VCAN-203ENST00000343200 ZNF73O43830 326 aaPredicted RBP4.64□□□□□ -1.67
VCAN-203ENST00000343200 PROK2Q9HC23 129 aa4.64□□□□□ -1.67
VCAN-203ENST00000343200 CDKN2A-AS1Q9UH64 79 aa4.64□□□□□ -1.67
VCAN-203ENST00000343200 REG3AQ06141 175 aa4.64□□□□□ -1.67
VCAN-203ENST00000343200 BPESC1Q9GZL8 116 aa4.64□□□□□ -1.67
VCAN-203ENST00000343200 A0A087WZ39 114 aa4.64□□□□□ -1.67
VCAN-203ENST00000343200 HCG22E2RYF7 251 aa4.63□□□□□ -1.67
VCAN-203ENST00000343200 C6orf99Q4VX62 202 aa4.63□□□□□ -1.67
VCAN-203ENST00000343200 CDIP1Q9H305 208 aa4.63□□□□□ -1.67
VCAN-203ENST00000343200 DSPP15924 2871 aaKnown RBP4.63□□□□□ -1.67
VCAN-203ENST00000343200 C7orf65Q6ZTY9 151 aa4.63□□□□□ -1.67
VCAN-203ENST00000343200 KLK12Q9UKR0 248 aa4.63□□□□□ -1.67
VCAN-203ENST00000343200 DNAJC9-AS1A6NH13 148 aa4.63□□□□□ -1.67
VCAN-203ENST00000343200 LINC01547P58512 204 aaPredicted RBP4.63□□□□□ -1.67
VCAN-203ENST00000343200 NBEAL2Q6ZNJ1 2754 aa4.63□□□□□ -1.67
VCAN-203ENST00000343200 A0A1B0GU69 56 aa4.63□□□□□ -1.67
VCAN-203ENST00000343200 RUSC1-AS1Q66K80 236 aa4.63□□□□□ -1.67
VCAN-203ENST00000343200 FRMD6-AS1P0C7T7 363 aa4.62□□□□□ -1.67
VCAN-203ENST00000343200 COL4A5P29400 1685 aa4.62□□□□□ -1.67
VCAN-203ENST00000343200 B3GALT5-AS1P59052 145 aa4.62□□□□□ -1.67
VCAN-203ENST00000343200 IGKV1D-37A0A075B6S9 117 aa4.62□□□□□ -1.67
VCAN-203ENST00000343200 C17orf82Q86X59 251 aaPredicted RBP4.61□□□□□ -1.67
VCAN-203ENST00000343200 CHCHD10Q8WYQ3 142 aaPredicted RBP4.61□□□□□ -1.67
VCAN-203ENST00000343200 PINLYPA6NC86 204 aa4.61□□□□□ -1.67
VCAN-203ENST00000343200 LRBAP50851 2863 aa4.61□□□□□ -1.67
VCAN-203ENST00000343200 TP53TG3Q9ULZ0 132 aa4.61□□□□□ -1.67
VCAN-203ENST00000343200 CD164L2Q6UWJ8 174 aa4.61□□□□□ -1.67
VCAN-203ENST00000343200 AJUBAQ96IF1 538 aa4.61□□□□□ -1.67
VCAN-203ENST00000343200 M0QY20 66 aa4.61□□□□□ -1.67
VCAN-203ENST00000343200 DCANP1Q8TF63 244 aa4.61□□□□□ -1.67
VCAN-203ENST00000343200 XAGE1AQ9HD64 81 aa4.61□□□□□ -1.67
VCAN-203ENST00000343200 ZNF292O60281 2723 aa4.61□□□□□ -1.67
VCAN-203ENST00000343200 A0A087WVE0 104 aa4.61□□□□□ -1.67
VCAN-203ENST00000343200 CNFNQ9BYD5 112 aa4.61□□□□□ -1.67
VCAN-203ENST00000343200 CEMP1Q6PRD7 247 aaPredicted RBP4.6□□□□□ -1.67
VCAN-203ENST00000343200 TP53AIP1Q9HCN2 124 aa4.6□□□□□ -1.67
VCAN-203ENST00000343200 IGLV2-14P01704 120 aa4.6□□□□□ -1.67
VCAN-203ENST00000343200 CCDC140Q96MF4 163 aa4.6□□□□□ -1.67
VCAN-203ENST00000343200 ZNF80P51504 273 aaPredicted RBP4.6□□□□□ -1.67
VCAN-203ENST00000343200 ATP11AUNQ6ZP68 121 aa4.6□□□□□ -1.67
VCAN-203ENST00000343200 PCNTO95613 3336 aa4.6□□□□□ -1.67
VCAN-203ENST00000343200 C4orf3Q8WVX3 66 aa4.6□□□□□ -1.67
VCAN-203ENST00000343200 C11orf1Q9H5F2 150 aa4.6□□□□□ -1.67
VCAN-203ENST00000343200 M0R378 163 aa4.6□□□□□ -1.67
VCAN-203ENST00000343200 GPHB5Q86YW7 130 aa4.6□□□□□ -1.67
VCAN-203ENST00000343200 PRR15Q8IV56 129 aa4.6□□□□□ -1.67
VCAN-203ENST00000343200 F8W735 103 aaPredicted RBP4.6□□□□□ -1.67
VCAN-203ENST00000343200 RNASE3P12724 160 aaKnown RBP4.6□□□□□ -1.67
VCAN-203ENST00000343200 FAM19A1Q7Z5A9 133 aa4.6□□□□□ -1.67
VCAN-203ENST00000343200 IGKV2-28A0A075B6P5 120 aa4.59□□□□□ -1.67
VCAN-203ENST00000343200 BCE1O60756 84 aa4.59□□□□□ -1.67
VCAN-203ENST00000343200 IGKV2D-28P01615 120 aa4.59□□□□□ -1.67
VCAN-203ENST00000343200 MGAQ8IWI9 3026 aa4.59□□□□□ -1.67
VCAN-203ENST00000343200 E7EQL1 145 aa4.59□□□□□ -1.67
VCAN-203ENST00000343200 IGLV2-8P01709 118 aa4.59□□□□□ -1.67
VCAN-203ENST00000343200 PATE2Q6UY27 113 aa4.59□□□□□ -1.67
VCAN-203ENST00000343200 K7EMT4 169 aa4.59□□□□□ -1.67
VCAN-203ENST00000343200 FLNBO75369 2602 aaKnown RBP4.59□□□□□ -1.67
VCAN-203ENST00000343200 DEFB136Q30KP8 78 aa4.59□□□□□ -1.67
VCAN-203ENST00000343200 IGHV7-81A0A0B4J1V7 117 aa4.59□□□□□ -1.68
VCAN-203ENST00000343200 CYP4F30PQ9H0H9 118 aa4.59□□□□□ -1.68
VCAN-203ENST00000343200 ACYP2P14621 99 aa4.59□□□□□ -1.68
VCAN-203ENST00000343200 C1orf137Q5JT78 98 aa4.59□□□□□ -1.68
VCAN-203ENST00000343200 C9orf66Q5T8R8 295 aa4.59□□□□□ -1.68
VCAN-203ENST00000343200 PRO0255Q9UI72 69 aa4.58□□□□□ -1.68
VCAN-203ENST00000343200 C5orf56Q8N8D9 126 aa4.58□□□□□ -1.68
VCAN-203ENST00000343200 C1orf64Q8NEQ6 169 aa4.58□□□□□ -1.68
VCAN-203ENST00000343200 LINC00474Q9P2X8 69 aa4.58□□□□□ -1.68
VCAN-203ENST00000343200 TRBV6-4A0A1B0GX49 114 aa4.58□□□□□ -1.68
VCAN-203ENST00000343200 SRCAPQ6ZRS2 3230 aa4.58□□□□□ -1.68
VCAN-203ENST00000343200 LOC100131303A0A0U1RQF7 123 aa4.58□□□□□ -1.68
VCAN-203ENST00000343200 SLURP1P55000 103 aa4.58□□□□□ -1.68
VCAN-203ENST00000343200 MBD6Q96DN6 1003 aa4.58□□□□□ -1.68
VCAN-203ENST00000343200 LINC00575Q6W349 94 aa4.58□□□□□ -1.68
VCAN-203ENST00000343200 Q6ZS46 218 aa4.58□□□□□ -1.68
VCAN-203ENST00000343200 X6R8D5 127 aa4.58□□□□□ -1.68
VCAN-203ENST00000343200 A0A087WYN8 130 aa4.57□□□□□ -1.68
VCAN-203ENST00000343200 IGLV1-44P01699 117 aa4.57□□□□□ -1.68
VCAN-203ENST00000343200 MYCNOSP40205 109 aa4.57□□□□□ -1.68
VCAN-203ENST00000343200 LINC00322Q6ZN03 302 aaPredicted RBP4.57□□□□□ -1.68
VCAN-203ENST00000343200 LY6HO94772 140 aa4.57□□□□□ -1.68
VCAN-203ENST00000343200 PRAC2D3DTV9 90 aa4.57□□□□□ -1.68
VCAN-203ENST00000343200 SPINK6Q6UWN8 80 aa4.57□□□□□ -1.68
VCAN-203ENST00000343200 Q8IZM0 81 aa4.57□□□□□ -1.68
VCAN-203ENST00000343200 ZNF843Q8N446 348 aa4.57□□□□□ -1.68
VCAN-203ENST00000343200 TRBV6-8A0A0A6YYG3 113 aa4.56□□□□□ -1.68
VCAN-203ENST00000343200 IGKV2-24A0A0C4DH68 120 aa4.56□□□□□ -1.68
VCAN-203ENST00000343200 IGLV2-23P01705 113 aa4.56□□□□□ -1.68
VCAN-203ENST00000343200 P0C879 139 aa4.56□□□□□ -1.68
VCAN-203ENST00000343200 KRTAP27-1Q3LI81 207 aa4.56□□□□□ -1.68
VCAN-203ENST00000343200 TSHBP01222 138 aa4.56□□□□□ -1.68
VCAN-203ENST00000343200 C6orf48Q9UBA6 75 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms