RNA–Protein interactions for RNA: ENST00000342579.7

BPTF-204, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene BPTF, Length 4,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-204ENST00000342579 VAMP8Q9BV40 100 aa2.93□□□□□ -1.94
BPTF-204ENST00000342579 GFRA4Q9GZZ7 299 aa2.93□□□□□ -1.94
BPTF-204ENST00000342579 STAB2Q8WWQ8 2551 aa2.93□□□□□ -1.94
BPTF-204ENST00000342579 NCR2O95944 276 aa2.92□□□□□ -1.94
BPTF-204ENST00000342579 HINT1P49773 126 aaPredicted RBP2.92□□□□□ -1.94
BPTF-204ENST00000342579 C18orf15Q96N68 181 aa2.92□□□□□ -1.94
BPTF-204ENST00000342579 MRPL18Q9H0U6 180 aaKnown RBP2.92□□□□□ -1.94
BPTF-204ENST00000342579 PLA2G2DQ9UNK4 145 aa2.92□□□□□ -1.94
BPTF-204ENST00000342579 CYSLTR1Q9Y271 337 aa2.92□□□□□ -1.94
BPTF-204ENST00000342579 TENM1Q9UKZ4 2725 aa2.92□□□□□ -1.94
BPTF-204ENST00000342579 TRAV8-4A0A0B4J246 113 aa2.92□□□□□ -1.94
BPTF-204ENST00000342579 J3QQQ9 107 aa2.92□□□□□ -1.94
BPTF-204ENST00000342579 SEC11AP67812 179 aa2.92□□□□□ -1.94
BPTF-204ENST00000342579 REG3AQ06141 175 aa2.92□□□□□ -1.94
BPTF-204ENST00000342579 FAM240AA0A1B0GVK7 77 aa2.92□□□□□ -1.94
BPTF-204ENST00000342579 PRSS1P07477 247 aa2.92□□□□□ -1.94
BPTF-204ENST00000342579 ORMDL2Q53FV1 153 aa2.92□□□□□ -1.94
BPTF-204ENST00000342579 LINC01556Q5JQF7 62 aa2.92□□□□□ -1.94
BPTF-204ENST00000342579 Q6ZUT4 128 aa2.92□□□□□ -1.94
BPTF-204ENST00000342579 LINC00269Q8N2A0 174 aa2.92□□□□□ -1.94
BPTF-204ENST00000342579 TMEM191AQ9H0A3 160 aa2.92□□□□□ -1.94
BPTF-204ENST00000342579 LINC01549A6NIU2 74 aa2.91□□□□□ -1.94
BPTF-204ENST00000342579 XCL1P47992 114 aa2.91□□□□□ -1.94
BPTF-204ENST00000342579 AMN1Q8IY45 258 aa2.91□□□□□ -1.94
BPTF-204ENST00000342579 C7orf33Q8WU49 177 aa2.91□□□□□ -1.94
BPTF-204ENST00000342579 C11orf21Q9P2W6 132 aa2.91□□□□□ -1.94
BPTF-204ENST00000342579 TRAV26-2A0A0B4J265 109 aa2.91□□□□□ -1.94
BPTF-204ENST00000342579 NEXN-AS1Q8NBZ9 246 aa2.91□□□□□ -1.94
BPTF-204ENST00000342579 FAM19A4Q96LR4 140 aa2.91□□□□□ -1.94
BPTF-204ENST00000342579 TRBV20-1A0A075B6N2 111 aa2.91□□□□□ -1.94
BPTF-204ENST00000342579 SMIM27A0A1W2PRY6 76 aa2.91□□□□□ -1.94
BPTF-204ENST00000342579 H3BRM9 83 aa2.91□□□□□ -1.94
BPTF-204ENST00000342579 IGLV2-11P01706 119 aa2.91□□□□□ -1.94
BPTF-204ENST00000342579 FOXA3P55318 350 aaPredicted RBP2.91□□□□□ -1.94
BPTF-204ENST00000342579 NUP35Q8NFH5 326 aa2.91□□□□□ -1.94
BPTF-204ENST00000342579 NXT2Q9NPJ8 142 aaKnown RBP2.91□□□□□ -1.94
BPTF-204ENST00000342579 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.9□□□□□ -1.94
BPTF-204ENST00000342579 IGKV2-29A2NJV5 120 aaPredicted RBP2.9□□□□□ -1.94
BPTF-204ENST00000342579 C8orf87E5RJ46 101 aa2.9□□□□□ -1.94
BPTF-204ENST00000342579 NMUP48645 174 aa2.9□□□□□ -1.94
BPTF-204ENST00000342579 RPL24P83731 157 aaKnown RBP2.9□□□□□ -1.94
BPTF-204ENST00000342579 CAMK2N2Q96S95 79 aa2.9□□□□□ -1.94
BPTF-204ENST00000342579 PYGO1Q9Y3Y4 419 aa2.9□□□□□ -1.94
BPTF-204ENST00000342579 UBE2D3P61077 147 aa2.9□□□□□ -1.94
BPTF-204ENST00000342579 UBE2D2P62837 147 aa2.9□□□□□ -1.94
BPTF-204ENST00000342579 COX8CQ7Z4L0 72 aa2.9□□□□□ -1.94
BPTF-204ENST00000342579 NTN5Q8WTR8 489 aaPredicted RBP2.9□□□□□ -1.94
BPTF-204ENST00000342579 CHCHD1Q96BP2 118 aaKnown RBP2.9□□□□□ -1.94
BPTF-204ENST00000342579 PLEKHB2Q96CS7 222 aa2.9□□□□□ -1.94
BPTF-204ENST00000342579 SCGB3A1Q96QR1 104 aa2.9□□□□□ -1.94
BPTF-204ENST00000342579 UPK3BQ9BT76 320 aa2.9□□□□□ -1.94
BPTF-204ENST00000342579 UQCR10Q9UDW1 63 aa2.9□□□□□ -1.94
BPTF-204ENST00000342579 TP73-AS1Q9UF72 201 aa2.9□□□□□ -1.94
BPTF-204ENST00000342579 V9GYV3 84 aa2.9□□□□□ -1.94
BPTF-204ENST00000342579 IBA57-AS1B1ANH7 110 aa2.9□□□□□ -1.95
BPTF-204ENST00000342579 D6R8Y8 96 aa2.9□□□□□ -1.95
BPTF-204ENST00000342579 CRIP1P50238 77 aa2.9□□□□□ -1.95
BPTF-204ENST00000342579 LAGE3Q14657 143 aa2.9□□□□□ -1.95
BPTF-204ENST00000342579 LINC00612Q8N6U2 182 aa2.9□□□□□ -1.95
BPTF-204ENST00000342579 SMKR1H3BMG3 65 aa2.9□□□□□ -1.95
BPTF-204ENST00000342579 H7C423 109 aa2.9□□□□□ -1.95
BPTF-204ENST00000342579 COX7A2LO14548 114 aa2.9□□□□□ -1.95
BPTF-204ENST00000342579 ZC2HC1BQ5TFG8 222 aa2.9□□□□□ -1.95
BPTF-204ENST00000342579 FAM104BQ5XKR9 115 aa2.9□□□□□ -1.95
BPTF-204ENST00000342579 C20orf78Q9BR46 151 aa2.9□□□□□ -1.95
BPTF-204ENST00000342579 IGKV2-24A0A0C4DH68 120 aa2.89□□□□□ -1.95
BPTF-204ENST00000342579 PLAC8L1A1L4L8 177 aa2.89□□□□□ -1.95
BPTF-204ENST00000342579 DNAH10OSP0CZ25 163 aa2.89□□□□□ -1.95
BPTF-204ENST00000342579 PFN2P35080 140 aa2.89□□□□□ -1.95
BPTF-204ENST00000342579 HNRNPA3P51991 378 aaKnown RBP2.89□□□□□ -1.95
BPTF-204ENST00000342579 GTSF1Q8WW33 167 aa2.89□□□□□ -1.95
BPTF-204ENST00000342579 PMCHL2Q9BQD1 86 aa2.89□□□□□ -1.95
BPTF-204ENST00000342579 RBM12B-AS1Q9P1G2 102 aa2.89□□□□□ -1.95
BPTF-204ENST00000342579 K7EP34 96 aa2.89□□□□□ -1.95
BPTF-204ENST00000342579 SERF1AO75920 110 aa2.89□□□□□ -1.95
BPTF-204ENST00000342579 HERVK_113P63121 156 aa2.89□□□□□ -1.95
BPTF-204ENST00000342579 UBE2BP63146 152 aa2.89□□□□□ -1.95
BPTF-204ENST00000342579 GAGE2BQ13066 116 aa2.89□□□□□ -1.95
BPTF-204ENST00000342579 RPL39LQ96EH5 51 aaKnown RBP2.89□□□□□ -1.95
BPTF-204ENST00000342579 PKD1L1Q8TDX9 2849 aa2.89□□□□□ -1.95
BPTF-204ENST00000342579 C19orf71A6NCJ1 209 aa2.89□□□□□ -1.95
BPTF-204ENST00000342579 PLA2G1BP04054 148 aaKnown RBP2.89□□□□□ -1.95
BPTF-204ENST00000342579 MPV17L2Q567V2 206 aa2.89□□□□□ -1.95
BPTF-204ENST00000342579 C3orf22Q8N5N4 141 aa2.89□□□□□ -1.95
BPTF-204ENST00000342579 DNHD1Q96M86 4753 aa2.88□□□□□ -1.95
BPTF-204ENST00000342579 IGHV1-58A0A0C4DH39 117 aa2.88□□□□□ -1.95
BPTF-204ENST00000342579 M0QY20 66 aa2.88□□□□□ -1.95
BPTF-204ENST00000342579 KRTDAPP60985 99 aa2.88□□□□□ -1.95
BPTF-204ENST00000342579 HERVK_113P61574 105 aa2.88□□□□□ -1.95
BPTF-204ENST00000342579 HIGD2BQ4VC39 106 aa2.88□□□□□ -1.95
BPTF-204ENST00000342579 MRPL55Q7Z7F7 128 aaKnown RBP2.88□□□□□ -1.95
BPTF-204ENST00000342579 C5orf38Q86SI9 138 aa2.88□□□□□ -1.95
BPTF-204ENST00000342579 CHCHD10Q8WYQ3 142 aaPredicted RBP2.88□□□□□ -1.95
BPTF-204ENST00000342579 TMEM70Q9BUB7 260 aa2.88□□□□□ -1.95
BPTF-204ENST00000342579 SMCPP49901 116 aaPredicted RBP2.88□□□□□ -1.95
BPTF-204ENST00000342579 RPL18AQ02543 176 aaKnown RBP2.88□□□□□ -1.95
BPTF-204ENST00000342579 MRPL51Q4U2R6 128 aaKnown RBP2.88□□□□□ -1.95
BPTF-204ENST00000342579 BVES-AS1Q5T3Y7 98 aa2.88□□□□□ -1.95
BPTF-204ENST00000342579 SMIM2Q9BVW6 85 aa2.88□□□□□ -1.95
BPTF-204ENST00000342579 IGHV3-64A0A075B6Q5 118 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms