RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 FSIP2Q5CZC0 6907 aa9.82□□□□□ -0.84
TRA2B-202ENST00000342294 KANTRA0A1W2PQU2 76 aa9.81□□□□□ -0.84
TRA2B-202ENST00000342294 HMSDA8MTL9 139 aa9.81□□□□□ -0.84
TRA2B-202ENST00000342294 NDUFC2-KCTD14E9PQ53 114 aa9.81□□□□□ -0.84
TRA2B-202ENST00000342294 GATCO43716 136 aaKnown RBP9.81□□□□□ -0.84
TRA2B-202ENST00000342294 TEX46H3BTG2 121 aa9.8□□□□□ -0.84
TRA2B-202ENST00000342294 FAM231DQ6ZW35 169 aa9.8□□□□□ -0.84
TRA2B-202ENST00000342294 AMN1Q8IY45 258 aa9.8□□□□□ -0.84
TRA2B-202ENST00000342294 NRACQ8N912 160 aa9.8□□□□□ -0.84
TRA2B-202ENST00000342294 CTDSP1Q9GZU7 261 aa9.8□□□□□ -0.84
TRA2B-202ENST00000342294 IGLV7-46A0A075B6I9 117 aa9.79□□□□□ -0.84
TRA2B-202ENST00000342294 TRBV30A0A0K0K1B3 111 aa9.79□□□□□ -0.84
TRA2B-202ENST00000342294 SMKR1H3BMG3 65 aa9.79□□□□□ -0.84
TRA2B-202ENST00000342294 SUMO2P61956 95 aaKnown RBP9.79□□□□□ -0.84
TRA2B-202ENST00000342294 KIR2DL4Q99706 377 aa9.79□□□□□ -0.84
TRA2B-202ENST00000342294 A0A1B0GUT8 65 aa9.78□□□□□ -0.84
TRA2B-202ENST00000342294 KRTAP13-2Q52LG2 175 aa9.78□□□□□ -0.84
TRA2B-202ENST00000342294 CT83Q5H943 113 aa9.78□□□□□ -0.84
TRA2B-202ENST00000342294 TMEM18Q96B42 140 aa9.78□□□□□ -0.84
TRA2B-202ENST00000342294 C2orf82Q6UX34 121 aa9.77□□□□□ -0.85
TRA2B-202ENST00000342294 BORCS7Q96B45 105 aa9.77□□□□□ -0.85
TRA2B-202ENST00000342294 C22orf24Q9Y442 160 aa9.77□□□□□ -0.85
TRA2B-202ENST00000342294 PPP1R17O96001 155 aa9.76□□□□□ -0.85
TRA2B-202ENST00000342294 RPL28P46779 137 aaKnown RBP9.76□□□□□ -0.85
TRA2B-202ENST00000342294 RPL39P62891 51 aaKnown RBP9.76□□□□□ -0.85
TRA2B-202ENST00000342294 ANAPC11Q9NYG5 84 aa9.76□□□□□ -0.85
TRA2B-202ENST00000342294 MRPS36P82909 103 aaKnown RBP9.75□□□□□ -0.85
TRA2B-202ENST00000342294 HIGD1CA8MV81 97 aa9.74□□□□□ -0.85
TRA2B-202ENST00000342294 BCE1O60756 84 aa9.74□□□□□ -0.85
TRA2B-202ENST00000342294 LINC01547P58512 204 aaPredicted RBP9.74□□□□□ -0.85
TRA2B-202ENST00000342294 LINC00242Q5T6M2 205 aa9.74□□□□□ -0.85
TRA2B-202ENST00000342294 LINC00304Q8N9R0 145 aa9.74□□□□□ -0.85
TRA2B-202ENST00000342294 SPANXA1Q9NS26 97 aa9.74□□□□□ -0.85
TRA2B-202ENST00000342294 IFITM10A6NMD0 228 aa9.73□□□□□ -0.85
TRA2B-202ENST00000342294 PPP1R2P9O14990 202 aa9.73□□□□□ -0.85
TRA2B-202ENST00000342294 TAGLN2P37802 199 aaKnown RBP9.73□□□□□ -0.85
TRA2B-202ENST00000342294 LBHQ53QV2 105 aaPredicted RBP9.73□□□□□ -0.85
TRA2B-202ENST00000342294 LINC00173Q6ZV60 143 aa9.73□□□□□ -0.85
TRA2B-202ENST00000342294 PACRGQ96M98 296 aaPredicted RBP9.73□□□□□ -0.85
TRA2B-202ENST00000342294 TGIF2-C20orf24A0A0A6YYL0 155 aa9.72□□□□□ -0.85
TRA2B-202ENST00000342294 HBBP68871 147 aa9.72□□□□□ -0.85
TRA2B-202ENST00000342294 RPL32P62910 135 aaKnown RBP9.71□□□□□ -0.86
TRA2B-202ENST00000342294 CTAG1AP78358 180 aa9.71□□□□□ -0.86
TRA2B-202ENST00000342294 TP73-AS1Q9UF72 201 aa9.71□□□□□ -0.86
TRA2B-202ENST00000342294 ZNF727A8MUV8 499 aa9.7□□□□□ -0.86
TRA2B-202ENST00000342294 FAM229BQ4G0N7 80 aa9.7□□□□□ -0.86
TRA2B-202ENST00000342294 LINC00469Q8N7U9 141 aa9.7□□□□□ -0.86
TRA2B-202ENST00000342294 C20orf78Q9BR46 151 aa9.7□□□□□ -0.86
TRA2B-202ENST00000342294 PPDPFQ9H3Y8 114 aa9.7□□□□□ -0.86
TRA2B-202ENST00000342294 TRBV24-1A0A075B6N3 115 aa9.69□□□□□ -0.86
TRA2B-202ENST00000342294 TMEM250H0YL14 139 aa9.69□□□□□ -0.86
TRA2B-202ENST00000342294 TCAPO15273 167 aa9.69□□□□□ -0.86
TRA2B-202ENST00000342294 MRPL51Q4U2R6 128 aaKnown RBP9.69□□□□□ -0.86
TRA2B-202ENST00000342294 MRPL55Q7Z7F7 128 aaKnown RBP9.68□□□□□ -0.86
TRA2B-202ENST00000342294 KRTAP4-1Q9BYQ7 146 aa9.68□□□□□ -0.86
TRA2B-202ENST00000342294 XAGE1AQ9HD64 81 aa9.68□□□□□ -0.86
TRA2B-202ENST00000342294 RIGQ13278 110 aa9.67□□□□□ -0.86
TRA2B-202ENST00000342294 KRTAP13-1Q8IUC0 172 aa9.67□□□□□ -0.86
TRA2B-202ENST00000342294 LINC01561Q8N1V8 128 aa9.67□□□□□ -0.86
TRA2B-202ENST00000342294 ASB16-AS1Q495Z4 193 aa9.66□□□□□ -0.86
TRA2B-202ENST00000342294 FAM104BQ5XKR9 115 aa9.66□□□□□ -0.86
TRA2B-202ENST00000342294 LINC00862A6NCI5 91 aa9.65□□□□□ -0.86
TRA2B-202ENST00000342294 SMIM2Q9BVW6 85 aa9.65□□□□□ -0.86
TRA2B-202ENST00000342294 OSTCQ9NRP0 149 aa9.65□□□□□ -0.86
TRA2B-202ENST00000342294 SRSF3P84103 164 aaKnown RBP9.64□□□□□ -0.87
TRA2B-202ENST00000342294 LINC01551Q86U37 167 aa9.64□□□□□ -0.87
TRA2B-202ENST00000342294 LINC00167Q96N53 147 aa9.64□□□□□ -0.87
TRA2B-202ENST00000342294 TNFRSF6BO95407 300 aa9.63□□□□□ -0.87
TRA2B-202ENST00000342294 PYGO1Q9Y3Y4 419 aa9.63□□□□□ -0.87
TRA2B-202ENST00000342294 IGLV4-3A0A075B6K6 122 aa9.62□□□□□ -0.87
TRA2B-202ENST00000342294 IGKV2D-26A0A0A0MRZ7 120 aa9.62□□□□□ -0.87
TRA2B-202ENST00000342294 RPL37AP8A6NKH3 93 aa9.62□□□□□ -0.87
TRA2B-202ENST00000342294 V9GYV3 84 aa9.62□□□□□ -0.87
TRA2B-202ENST00000342294 CKS2P33552 79 aa9.61□□□□□ -0.87
TRA2B-202ENST00000342294 CKS1BP61024 79 aa9.61□□□□□ -0.87
TRA2B-202ENST00000342294 PRSS2P07478 247 aa9.6□□□□□ -0.87
TRA2B-202ENST00000342294 IFI27P40305 119 aaPredicted RBP9.6□□□□□ -0.87
TRA2B-202ENST00000342294 RGS21Q2M5E4 152 aa9.6□□□□□ -0.87
TRA2B-202ENST00000342294 KRTAP13-3Q3SY46 172 aa9.6□□□□□ -0.87
TRA2B-202ENST00000342294 Q8IZM0 81 aa9.6□□□□□ -0.87
TRA2B-202ENST00000342294 C6orf226Q5I0X4 101 aa9.59□□□□□ -0.87
TRA2B-202ENST00000342294 Q6ZN92 141 aa9.59□□□□□ -0.87
TRA2B-202ENST00000342294 FP248Q71RG6 208 aaPredicted RBP9.59□□□□□ -0.87
TRA2B-202ENST00000342294 TOMM7Q9P0U1 55 aa9.59□□□□□ -0.87
TRA2B-202ENST00000342294 UBE2AP49459 152 aa9.58□□□□□ -0.88
TRA2B-202ENST00000342294 CEBPGP53567 150 aa9.58□□□□□ -0.88
TRA2B-202ENST00000342294 TMEM141Q96I45 108 aa9.58□□□□□ -0.88
TRA2B-202ENST00000342294 SMIM7Q9BQ49 75 aa9.58□□□□□ -0.88
TRA2B-202ENST00000342294 NAT8BQ9UHF3 227 aa9.58□□□□□ -0.88
TRA2B-202ENST00000342294 NPYP01303 97 aa9.57□□□□□ -0.88
TRA2B-202ENST00000342294 LCE2CQ5TA81 110 aa9.57□□□□□ -0.88
TRA2B-202ENST00000342294 LINC00337Q8N6G1 96 aa9.57□□□□□ -0.88
TRA2B-202ENST00000342294 EIF5A2Q9GZV4 153 aaKnown RBP9.57□□□□□ -0.88
TRA2B-202ENST00000342294 GAGE10A6NGK3 116 aa9.56□□□□□ -0.88
TRA2B-202ENST00000342294 D6R8Y8 96 aa9.56□□□□□ -0.88
TRA2B-202ENST00000342294 ALKBH7Q9BT30 221 aaPredicted RBP9.56□□□□□ -0.88
TRA2B-202ENST00000342294 IGLV5-37A0A075B6J1 123 aa9.55□□□□□ -0.88
TRA2B-202ENST00000342294 F8VRH5 84 aa9.55□□□□□ -0.88
TRA2B-202ENST00000342294 PNRC1Q12796 327 aaPredicted RBP9.55□□□□□ -0.88
TRA2B-202ENST00000342294 FAM74A3Q4VXF1 159 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms