RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 FAM236DA0A1B0GTK5 79 aa10.75□□□□□ -0.69
RRP1B-201ENST00000340648 FAM236CP0DP71 79 aa10.75□□□□□ -0.69
RRP1B-201ENST00000340648 WFDC9Q8NEX5 89 aa10.75□□□□□ -0.69
RRP1B-201ENST00000340648 Q6ZSN1 163 aa10.75□□□□□ -0.69
RRP1B-201ENST00000340648 XAGE1AQ9HD64 81 aa10.73□□□□□ -0.69
RRP1B-201ENST00000340648 PCSK5Q92824 1860 aa10.72□□□□□ -0.69
RRP1B-201ENST00000340648 ABCA2Q9BZC7 2435 aa10.72□□□□□ -0.69
RRP1B-201ENST00000340648 LINC00959A0A1B0GUT2 108 aa10.72□□□□□ -0.69
RRP1B-201ENST00000340648 LINC00315P59091 139 aa10.72□□□□□ -0.69
RRP1B-201ENST00000340648 A0A087WVE0 104 aa10.72□□□□□ -0.69
RRP1B-201ENST00000340648 LINC00526Q96FQ7 95 aa10.72□□□□□ -0.69
RRP1B-201ENST00000340648 PRORYQ9H606 182 aa10.72□□□□□ -0.69
RRP1B-201ENST00000340648 ANKRD11Q6UB99 2663 aaPredicted RBP10.72□□□□□ -0.69
RRP1B-201ENST00000340648 MYO18BQ8IUG5 2567 aa10.72□□□□□ -0.69
RRP1B-201ENST00000340648 C5orf47Q569G3 176 aa10.71□□□□□ -0.69
RRP1B-201ENST00000340648 BBC3Q96PG8 261 aaPredicted RBP10.71□□□□□ -0.7
RRP1B-201ENST00000340648 FAM110AQ9BQ89 295 aa10.71□□□□□ -0.7
RRP1B-201ENST00000340648 A0A087WYN8 130 aa10.71□□□□□ -0.7
RRP1B-201ENST00000340648 RMI2Q96E14 147 aa10.71□□□□□ -0.7
RRP1B-201ENST00000340648 M0QXV9 152 aa10.7□□□□□ -0.7
RRP1B-201ENST00000340648 LRRC75A-AS1Q8N1F1 130 aa10.7□□□□□ -0.7
RRP1B-201ENST00000340648 PRRC2AP48634 2157 aaKnown RBP10.7□□□□□ -0.7
RRP1B-201ENST00000340648 Q6JHZ5 121 aa10.7□□□□□ -0.7
RRP1B-201ENST00000340648 USP9XQ93008 2570 aaPredicted RBP10.69□□□□□ -0.7
RRP1B-201ENST00000340648 ODF3L2Q3SX64 289 aa10.69□□□□□ -0.7
RRP1B-201ENST00000340648 RPL28P46779 137 aaKnown RBP10.69□□□□□ -0.7
RRP1B-201ENST00000340648 Q6ZQY7 126 aa10.69□□□□□ -0.7
RRP1B-201ENST00000340648 TLN2Q9Y4G6 2542 aa10.69□□□□□ -0.7
RRP1B-201ENST00000340648 BPY2O14599 106 aa10.68□□□□□ -0.7
RRP1B-201ENST00000340648 BRK1Q8WUW1 75 aa10.68□□□□□ -0.7
RRP1B-201ENST00000340648 BRCA2P51587 3418 aa10.68□□□□□ -0.7
RRP1B-201ENST00000340648 SNURFQ9Y675 71 aa10.68□□□□□ -0.7
RRP1B-201ENST00000340648 SETD2Q9BYW2 2564 aaPredicted RBP10.68□□□□□ -0.7
RRP1B-201ENST00000340648 MKI67P46013 3256 aaKnown RBP10.68□□□□□ -0.7
RRP1B-201ENST00000340648 LINC00482Q8N8I6 264 aa10.67□□□□□ -0.7
RRP1B-201ENST00000340648 KLK5Q9Y337 293 aaPredicted RBP10.67□□□□□ -0.7
RRP1B-201ENST00000340648 BRI3O95415 125 aa10.67□□□□□ -0.7
RRP1B-201ENST00000340648 NDUFC2O95298 119 aa10.66□□□□□ -0.7
RRP1B-201ENST00000340648 USP9YO00507 2555 aaPredicted RBP10.66□□□□□ -0.7
RRP1B-201ENST00000340648 CD164L2Q6UWJ8 174 aa10.66□□□□□ -0.7
RRP1B-201ENST00000340648 IGLV4-60A0A075B6I1 120 aa10.65□□□□□ -0.7
RRP1B-201ENST00000340648 LYRM9A8MSI8 78 aa10.65□□□□□ -0.7
RRP1B-201ENST00000340648 MPLKIPQ8TAP9 179 aa10.65□□□□□ -0.7
RRP1B-201ENST00000340648 FAM19A4Q96LR4 140 aa10.65□□□□□ -0.7
RRP1B-201ENST00000340648 PRR3P79522 188 aaKnown RBP10.64□□□□□ -0.71
RRP1B-201ENST00000340648 C1orf158Q8N1D5 194 aa10.64□□□□□ -0.71
RRP1B-201ENST00000340648 J3QKU1 62 aa10.64□□□□□ -0.71
RRP1B-201ENST00000340648 CCKP06307 115 aa10.63□□□□□ -0.71
RRP1B-201ENST00000340648 CHD9Q3L8U1 2897 aa10.63□□□□□ -0.71
RRP1B-201ENST00000340648 SMIM9A6NGZ8 99 aa10.63□□□□□ -0.71
RRP1B-201ENST00000340648 MP68P56378 58 aa10.63□□□□□ -0.71
RRP1B-201ENST00000340648 Q8IZM0 81 aa10.62□□□□□ -0.71
RRP1B-201ENST00000340648 RANBP2P49792 3224 aaKnown RBP10.62□□□□□ -0.71
RRP1B-201ENST00000340648 CSDC2Q9Y534 153 aaKnown RBP10.61□□□□□ -0.71
RRP1B-201ENST00000340648 BEAN1Q3B7T3 259 aa10.61□□□□□ -0.71
RRP1B-201ENST00000340648 SBSPONQ8IVN8 264 aa10.61□□□□□ -0.71
RRP1B-201ENST00000340648 C9orf116Q5BN46 136 aaPredicted RBP10.61□□□□□ -0.71
RRP1B-201ENST00000340648 TRBV7-7A0A0K0K1E9 115 aa10.6□□□□□ -0.71
RRP1B-201ENST00000340648 C3orf84H3BNL1 204 aa10.6□□□□□ -0.71
RRP1B-201ENST00000340648 NDUFS5O43920 106 aa10.6□□□□□ -0.71
RRP1B-201ENST00000340648 LAMA2P24043 3122 aaKnown RBP10.6□□□□□ -0.71
RRP1B-201ENST00000340648 A0A087WZ39 114 aa10.6□□□□□ -0.71
RRP1B-201ENST00000340648 Q8N2B8 174 aa10.6□□□□□ -0.71
RRP1B-201ENST00000340648 LINC00337Q8N6G1 96 aa10.6□□□□□ -0.71
RRP1B-201ENST00000340648 Q8N814 137 aa10.59□□□□□ -0.71
RRP1B-201ENST00000340648 LINC01006Q8NI28 216 aa10.59□□□□□ -0.71
RRP1B-201ENST00000340648 Q9UF83 564 aa10.59□□□□□ -0.71
RRP1B-201ENST00000340648 LOC107984640A0A0U1RRK4 108 aa10.58□□□□□ -0.72
RRP1B-201ENST00000340648 LINC00846Q9NV44 126 aa10.58□□□□□ -0.72
RRP1B-201ENST00000340648 PIEZO1Q92508 2521 aa10.58□□□□□ -0.72
RRP1B-201ENST00000340648 NTM-AS1Q6ZSK4 140 aa10.58□□□□□ -0.72
RRP1B-201ENST00000340648 COX17Q14061 63 aa10.57□□□□□ -0.72
RRP1B-201ENST00000340648 HRCT1Q6UXD1 115 aa10.57□□□□□ -0.72
RRP1B-201ENST00000340648 FN1P02751 2386 aaKnown RBP10.57□□□□□ -0.72
RRP1B-201ENST00000340648 NDUFC2-KCTD14E9PQ53 114 aa10.56□□□□□ -0.72
RRP1B-201ENST00000340648 LAMA3Q16787 3333 aa10.56□□□□□ -0.72
RRP1B-201ENST00000340648 IGLV5-39A0A0G2JS06 123 aa10.56□□□□□ -0.72
RRP1B-201ENST00000340648 UNQ6190/PRO20217Q6UXQ8 127 aa10.56□□□□□ -0.72
RRP1B-201ENST00000340648 FAM19A5Q7Z5A7 132 aaPredicted RBP10.56□□□□□ -0.72
RRP1B-201ENST00000340648 A0A0U1RQV1 116 aa10.55□□□□□ -0.72
RRP1B-201ENST00000340648 PKIGQ9Y2B9 76 aa10.55□□□□□ -0.72
RRP1B-201ENST00000340648 IGKV2-28A0A075B6P5 120 aa10.55□□□□□ -0.72
RRP1B-201ENST00000340648 CYSRT1A8MQ03 144 aa10.55□□□□□ -0.72
RRP1B-201ENST00000340648 IGKV2D-28P01615 120 aa10.55□□□□□ -0.72
RRP1B-201ENST00000340648 FHL3Q13643 280 aa10.54□□□□□ -0.72
RRP1B-201ENST00000340648 PPDPFQ9H3Y8 114 aa10.54□□□□□ -0.72
RRP1B-201ENST00000340648 ZNF73O43830 326 aaPredicted RBP10.54□□□□□ -0.72
RRP1B-201ENST00000340648 ABCA12Q86UK0 2595 aa10.54□□□□□ -0.72
RRP1B-201ENST00000340648 C11orf72Q8NBR9 251 aa10.54□□□□□ -0.72
RRP1B-201ENST00000340648 FHL2Q14192 279 aa10.53□□□□□ -0.72
RRP1B-201ENST00000340648 FAM19A1Q7Z5A9 133 aa10.53□□□□□ -0.72
RRP1B-201ENST00000340648 PLA2G2AP14555 144 aa10.53□□□□□ -0.72
RRP1B-201ENST00000340648 SOSTDC1Q6X4U4 206 aa10.52□□□□□ -0.72
RRP1B-201ENST00000340648 COL27A1Q8IZC6 1860 aaPredicted RBP10.52□□□□□ -0.72
RRP1B-201ENST00000340648 CHD8Q9HCK8 2581 aa10.52□□□□□ -0.72
RRP1B-201ENST00000340648 HILS1P60008 231 aa10.52□□□□□ -0.73
RRP1B-201ENST00000340648 FAM218AQ96MZ4 157 aa10.52□□□□□ -0.73
RRP1B-201ENST00000340648 IGKV2-24A0A0C4DH68 120 aa10.51□□□□□ -0.73
RRP1B-201ENST00000340648 UNC80Q8N2C7 3258 aa10.51□□□□□ -0.73
RRP1B-201ENST00000340648 MIFP14174 115 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms