RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 TMEM89A2RUT3 159 aa14.53□□□□□ -0.08
RUNX3-202ENST00000338888 MIR7-3HGQ8N6C7 128 aa14.52□□□□□ -0.08
RUNX3-202ENST00000338888 IGKV2-28A0A075B6P5 120 aa14.52□□□□□ -0.09
RUNX3-202ENST00000338888 IGKV2D-28P01615 120 aa14.52□□□□□ -0.09
RUNX3-202ENST00000338888 FAM19A3Q7Z5A8 133 aa14.52□□□□□ -0.09
RUNX3-202ENST00000338888 PF4P02776 101 aa14.51□□□□□ -0.09
RUNX3-202ENST00000338888 KIR2DL5BQ8NHK3 375 aa14.51□□□□□ -0.09
RUNX3-202ENST00000338888 NTM-AS1Q6ZSK4 140 aa14.51□□□□□ -0.09
RUNX3-202ENST00000338888 SMIM11BQ8TCY0 68 aa14.51□□□□□ -0.09
RUNX3-202ENST00000338888 SND1-IT1Q9HBX3 110 aa14.51□□□□□ -0.09
RUNX3-202ENST00000338888 FBN2P35556 2912 aa14.51□□□□□ -0.09
RUNX3-202ENST00000338888 RPS28P62857 69 aaKnown RBP14.5□□□□□ -0.09
RUNX3-202ENST00000338888 CDC42SE2Q9NRR3 84 aa14.5□□□□□ -0.09
RUNX3-202ENST00000338888 USP9YO00507 2555 aaPredicted RBP14.49□□□□□ -0.09
RUNX3-202ENST00000338888 MSMBP08118 114 aa14.49□□□□□ -0.09
RUNX3-202ENST00000338888 A8MTW9 85 aa14.48□□□□□ -0.09
RUNX3-202ENST00000338888 ABCA12Q86UK0 2595 aa14.48□□□□□ -0.09
RUNX3-202ENST00000338888 PTPN13Q12923 2485 aa14.48□□□□□ -0.09
RUNX3-202ENST00000338888 SLURP1P55000 103 aa14.48□□□□□ -0.09
RUNX3-202ENST00000338888 DEFB136Q30KP8 78 aa14.48□□□□□ -0.09
RUNX3-202ENST00000338888 TOMM7Q9P0U1 55 aa14.48□□□□□ -0.09
RUNX3-202ENST00000338888 ANKRD17O75179 2603 aaKnown RBP14.48□□□□□ -0.09
RUNX3-202ENST00000338888 DEFB112Q30KQ8 113 aa14.47□□□□□ -0.09
RUNX3-202ENST00000338888 Q6JHZ5 121 aa14.47□□□□□ -0.09
RUNX3-202ENST00000338888 SERP2Q8N6R1 65 aa14.47□□□□□ -0.09
RUNX3-202ENST00000338888 NCR3O14931 201 aa14.46□□□□□ -0.09
RUNX3-202ENST00000338888 C2CD3Q4AC94 2353 aa14.46□□□□□ -0.09
RUNX3-202ENST00000338888 LECT2O14960 151 aa14.46□□□□□ -0.09
RUNX3-202ENST00000338888 LINC01561Q8N1V8 128 aa14.46□□□□□ -0.09
RUNX3-202ENST00000338888 OVOL2Q9BRP0 275 aa14.46□□□□□ -0.09
RUNX3-202ENST00000338888 OR13C6PQ8NH95 151 aa14.45□□□□□ -0.1
RUNX3-202ENST00000338888 DPH3Q96FX2 82 aa14.45□□□□□ -0.1
RUNX3-202ENST00000338888 TRGV1A0A0A0MS02 117 aa14.45□□□□□ -0.1
RUNX3-202ENST00000338888 SLPIP03973 132 aa14.45□□□□□ -0.1
RUNX3-202ENST00000338888 LINC00158P58513 81 aa14.45□□□□□ -0.1
RUNX3-202ENST00000338888 RPL36AP83881 106 aaKnown RBP14.45□□□□□ -0.1
RUNX3-202ENST00000338888 RPL36ALQ969Q0 106 aaKnown RBP14.45□□□□□ -0.1
RUNX3-202ENST00000338888 C18orf65Q6ZTR6 163 aa14.45□□□□□ -0.1
RUNX3-202ENST00000338888 UPK3BQ9BT76 320 aa14.45□□□□□ -0.1
RUNX3-202ENST00000338888 MAPK1IP1LQ8NDC0 245 aa14.44□□□□□ -0.1
RUNX3-202ENST00000338888 XCL2Q9UBD3 114 aa14.44□□□□□ -0.1
RUNX3-202ENST00000338888 USP17L23D6RBM5 183 aa14.44□□□□□ -0.1
RUNX3-202ENST00000338888 OBSCN-AS1Q96MR7 158 aa14.44□□□□□ -0.1
RUNX3-202ENST00000338888 DSCR8Q96T75 97 aa14.44□□□□□ -0.1
RUNX3-202ENST00000338888 INSP01308 110 aa14.43□□□□□ -0.1
RUNX3-202ENST00000338888 COX7B2Q8TF08 81 aa14.43□□□□□ -0.1
RUNX3-202ENST00000338888 IGKV3OR2-268A0A0C4DH90 116 aa14.43□□□□□ -0.1
RUNX3-202ENST00000338888 TMEM258P61165 79 aa14.43□□□□□ -0.1
RUNX3-202ENST00000338888 MAP6D1Q9H9H5 199 aa14.43□□□□□ -0.1
RUNX3-202ENST00000338888 CHD6Q8TD26 2715 aa14.42□□□□□ -0.1
RUNX3-202ENST00000338888 H0YGX0 51 aa14.42□□□□□ -0.1
RUNX3-202ENST00000338888 CCL18P55774 89 aa14.42□□□□□ -0.1
RUNX3-202ENST00000338888 KRTAP10-9P60411 292 aa14.42□□□□□ -0.1
RUNX3-202ENST00000338888 UBE2E2Q96LR5 201 aa14.41□□□□□ -0.1
RUNX3-202ENST00000338888 ZANQ9Y493 2812 aa14.4□□□□□ -0.1
RUNX3-202ENST00000338888 K7EQD1 137 aa14.4□□□□□ -0.1
RUNX3-202ENST00000338888 UBE2L6O14933 153 aa14.4□□□□□ -0.1
RUNX3-202ENST00000338888 OXTP01178 125 aa14.4□□□□□ -0.1
RUNX3-202ENST00000338888 NAV2Q8IVL1 2488 aa14.39□□□□□ -0.11
RUNX3-202ENST00000338888 PFN2P35080 140 aa14.39□□□□□ -0.11
RUNX3-202ENST00000338888 Q6ZTI0 123 aa14.38□□□□□ -0.11
RUNX3-202ENST00000338888 PAX4O43316 350 aa14.37□□□□□ -0.11
RUNX3-202ENST00000338888 CUBNO60494 3623 aa14.37□□□□□ -0.11
RUNX3-202ENST00000338888 B4DSR2 109 aa14.36□□□□□ -0.11
RUNX3-202ENST00000338888 TMEM243Q9BU79 118 aa14.36□□□□□ -0.11
RUNX3-202ENST00000338888 TRBV10-1A0A0K0K1A3 114 aa14.36□□□□□ -0.11
RUNX3-202ENST00000338888 HILS1P60008 231 aa14.36□□□□□ -0.11
RUNX3-202ENST00000338888 NBPF19A0A087WUL8 3843 aa14.36□□□□□ -0.11
RUNX3-202ENST00000338888 NOTCH3Q9UM47 2321 aa14.34□□□□□ -0.11
RUNX3-202ENST00000338888 C1orf158Q8N1D5 194 aa14.34□□□□□ -0.11
RUNX3-202ENST00000338888 WFDC9Q8NEX5 89 aa14.34□□□□□ -0.11
RUNX3-202ENST00000338888 DSCR9P59020 149 aa14.33□□□□□ -0.11
RUNX3-202ENST00000338888 DYNLRB2Q8TF09 96 aa14.33□□□□□ -0.11
RUNX3-202ENST00000338888 TENM4Q6N022 2769 aa14.33□□□□□ -0.12
RUNX3-202ENST00000338888 SS18Q15532 418 aa14.33□□□□□ -0.12
RUNX3-202ENST00000338888 ORMDL1Q9P0S3 153 aa14.32□□□□□ -0.12
RUNX3-202ENST00000338888 C4orf26Q17RF5 130 aa14.32□□□□□ -0.12
RUNX3-202ENST00000338888 ZNF702PQ9H963 129 aa14.32□□□□□ -0.12
RUNX3-202ENST00000338888 CCKP06307 115 aa14.31□□□□□ -0.12
RUNX3-202ENST00000338888 LOC100131303A0A0U1RQF7 123 aa14.31□□□□□ -0.12
RUNX3-202ENST00000338888 FHL2Q14192 279 aa14.31□□□□□ -0.12
RUNX3-202ENST00000338888 IL17DQ8TAD2 202 aa14.3□□□□□ -0.12
RUNX3-202ENST00000338888 TRAV23DV6A0A075B6W5 121 aa14.29□□□□□ -0.12
RUNX3-202ENST00000338888 IBA57-AS1B1ANH7 110 aa14.29□□□□□ -0.12
RUNX3-202ENST00000338888 LINC01356Q8N9X3 169 aa14.29□□□□□ -0.12
RUNX3-202ENST00000338888 C11orf68Q9H3H3 251 aaKnown RBP14.29□□□□□ -0.12
RUNX3-202ENST00000338888 APCP25054 2843 aa14.29□□□□□ -0.12
RUNX3-202ENST00000338888 IGLV4-60A0A075B6I1 120 aa14.28□□□□□ -0.12
RUNX3-202ENST00000338888 GHRHP01286 108 aa14.28□□□□□ -0.12
RUNX3-202ENST00000338888 KHDC1LQ5JSQ8 128 aa14.28□□□□□ -0.12
RUNX3-202ENST00000338888 DEFB114Q30KQ6 69 aa14.28□□□□□ -0.12
RUNX3-202ENST00000338888 NOP10Q9NPE3 64 aaKnown RBP14.28□□□□□ -0.12
RUNX3-202ENST00000338888 IGHV3OR16-9A0A0B4J2B5 98 aa14.27□□□□□ -0.13
RUNX3-202ENST00000338888 FAM19A1Q7Z5A9 133 aa14.27□□□□□ -0.13
RUNX3-202ENST00000338888 STHQ8IWL8 128 aa14.27□□□□□ -0.13
RUNX3-202ENST00000338888 A0A096LNT2 108 aa14.27□□□□□ -0.13
RUNX3-202ENST00000338888 TRBV6-4A0A1B0GX49 114 aa14.27□□□□□ -0.13
RUNX3-202ENST00000338888 HRCT1Q6UXD1 115 aa14.26□□□□□ -0.13
RUNX3-202ENST00000338888 ODF3L2Q3SX64 289 aa14.26□□□□□ -0.13
RUNX3-202ENST00000338888 Q5XG85 94 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms