RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 MIFP14174 115 aa10.04□□□□□ -0.8
RTN4-202ENST00000337526 LINC00959A0A1B0GUT2 108 aa10.03□□□□□ -0.8
RTN4-202ENST00000337526 DEFB131BA0A096LNP1 70 aa10.03□□□□□ -0.8
RTN4-202ENST00000337526 LINC00526Q96FQ7 95 aa10.03□□□□□ -0.8
RTN4-202ENST00000337526 CDC42SE2Q9NRR3 84 aa10.03□□□□□ -0.8
RTN4-202ENST00000337526 SMIM11BQ8TCY0 68 aa10.03□□□□□ -0.8
RTN4-202ENST00000337526 LINC00242Q5T6M2 205 aa10.03□□□□□ -0.8
RTN4-202ENST00000337526 Q6ZQY7 126 aa10.03□□□□□ -0.8
RTN4-202ENST00000337526 ZNF843Q8N446 348 aa10.03□□□□□ -0.8
RTN4-202ENST00000337526 H0Y9J4 135 aa10.02□□□□□ -0.8
RTN4-202ENST00000337526 NDUFC2O95298 119 aa10.02□□□□□ -0.81
RTN4-202ENST00000337526 POLQO75417 2590 aa10.02□□□□□ -0.81
RTN4-202ENST00000337526 IGLV4-69A0A075B6H9 119 aa10.02□□□□□ -0.81
RTN4-202ENST00000337526 UBE2D3P61077 147 aa10.02□□□□□ -0.81
RTN4-202ENST00000337526 UBE2D2P62837 147 aa10.02□□□□□ -0.81
RTN4-202ENST00000337526 CCKP06307 115 aa10.01□□□□□ -0.81
RTN4-202ENST00000337526 INAFM1C9JVW0 142 aa10.01□□□□□ -0.81
RTN4-202ENST00000337526 USP17L23D6RBM5 183 aa10.01□□□□□ -0.81
RTN4-202ENST00000337526 MRGPRG-AS1Q2M3A8 158 aa10.01□□□□□ -0.81
RTN4-202ENST00000337526 AGRNO00468 2067 aa10.01□□□□□ -0.81
RTN4-202ENST00000337526 CPAMD8Q8IZJ3 1885 aa10□□□□□ -0.81
RTN4-202ENST00000337526 NDUFA7O95182 113 aa10□□□□□ -0.81
RTN4-202ENST00000337526 SYCNQ0VAF6 134 aa10□□□□□ -0.81
RTN4-202ENST00000337526 A0A096LNI7 61 aa10□□□□□ -0.81
RTN4-202ENST00000337526 A0A1W2PPR1 153 aa10□□□□□ -0.81
RTN4-202ENST00000337526 TSPEAR-AS2P59090 65 aa9.99□□□□□ -0.81
RTN4-202ENST00000337526 ODF3L2Q3SX64 289 aa9.99□□□□□ -0.81
RTN4-202ENST00000337526 CRIP2P52943 208 aaPredicted RBP9.99□□□□□ -0.81
RTN4-202ENST00000337526 IGLV2-18A0A075B6J9 118 aa9.99□□□□□ -0.81
RTN4-202ENST00000337526 CHKB-CPT1BH3BT56 60 aa9.99□□□□□ -0.81
RTN4-202ENST00000337526 FAM236DA0A1B0GTK5 79 aa9.98□□□□□ -0.81
RTN4-202ENST00000337526 FAM236CP0DP71 79 aa9.98□□□□□ -0.81
RTN4-202ENST00000337526 SERP2Q8N6R1 65 aa9.98□□□□□ -0.81
RTN4-202ENST00000337526 C1orf158Q8N1D5 194 aa9.98□□□□□ -0.81
RTN4-202ENST00000337526 B9D2Q9BPU9 175 aa9.97□□□□□ -0.81
RTN4-202ENST00000337526 SMIM1B2RUZ4 78 aa9.97□□□□□ -0.81
RTN4-202ENST00000337526 CCDC179H3BU77 68 aa9.97□□□□□ -0.81
RTN4-202ENST00000337526 KLK5Q9Y337 293 aaPredicted RBP9.96□□□□□ -0.81
RTN4-202ENST00000337526 FAM19A1Q7Z5A9 133 aa9.96□□□□□ -0.82
RTN4-202ENST00000337526 BRK1Q8WUW1 75 aa9.96□□□□□ -0.82
RTN4-202ENST00000337526 C14orf177Q52M58 125 aa9.95□□□□□ -0.82
RTN4-202ENST00000337526 HILS1P60008 231 aa9.95□□□□□ -0.82
RTN4-202ENST00000337526 LELP1Q5T871 98 aa9.95□□□□□ -0.82
RTN4-202ENST00000337526 IGKV2-28A0A075B6P5 120 aa9.95□□□□□ -0.82
RTN4-202ENST00000337526 IGKV2D-28P01615 120 aa9.95□□□□□ -0.82
RTN4-202ENST00000337526 Q8IZM0 81 aa9.95□□□□□ -0.82
RTN4-202ENST00000337526 ZNF580Q9UK33 172 aa9.95□□□□□ -0.82
RTN4-202ENST00000337526 C3orf84H3BNL1 204 aa9.95□□□□□ -0.82
RTN4-202ENST00000337526 CHCHD7Q9BUK0 85 aa9.94□□□□□ -0.82
RTN4-202ENST00000337526 FAM240AA0A1B0GVK7 77 aa9.94□□□□□ -0.82
RTN4-202ENST00000337526 COX7CP15954 63 aa9.94□□□□□ -0.82
RTN4-202ENST00000337526 ADAMTSL4-AS1Q5T5F5 129 aa9.94□□□□□ -0.82
RTN4-202ENST00000337526 KPRPQ5T749 579 aaPredicted RBP9.94□□□□□ -0.82
RTN4-202ENST00000337526 TET2Q6N021 2002 aaPredicted RBP9.93□□□□□ -0.82
RTN4-202ENST00000337526 ACANP16112 2415 aa9.93□□□□□ -0.82
RTN4-202ENST00000337526 FAM19A5Q7Z5A7 132 aaPredicted RBP9.93□□□□□ -0.82
RTN4-202ENST00000337526 AMELXQ99217 191 aa9.93□□□□□ -0.82
RTN4-202ENST00000337526 EXPH5Q8NEV8 1989 aa9.93□□□□□ -0.82
RTN4-202ENST00000337526 BRI3O95415 125 aa9.93□□□□□ -0.82
RTN4-202ENST00000337526 LINC00694P0DN24 101 aa9.92□□□□□ -0.82
RTN4-202ENST00000337526 COX17Q14061 63 aa9.92□□□□□ -0.82
RTN4-202ENST00000337526 M0R378 163 aa9.92□□□□□ -0.82
RTN4-202ENST00000337526 KIR2DL5BQ8NHK3 375 aa9.92□□□□□ -0.82
RTN4-202ENST00000337526 COL5A1P20908 1838 aaPredicted RBP9.92□□□□□ -0.82
RTN4-202ENST00000337526 COX6A2Q02221 97 aa9.92□□□□□ -0.82
RTN4-202ENST00000337526 CLUHP3Q96NS8 147 aa9.92□□□□□ -0.82
RTN4-202ENST00000337526 Q6Q795 121 aa9.92□□□□□ -0.82
RTN4-202ENST00000337526 MPLKIPQ8TAP9 179 aa9.92□□□□□ -0.82
RTN4-202ENST00000337526 ADAMTS20P59510 1910 aa9.92□□□□□ -0.82
RTN4-202ENST00000337526 A0A087WZ39 114 aa9.91□□□□□ -0.82
RTN4-202ENST00000337526 CYSRT1A8MQ03 144 aa9.91□□□□□ -0.82
RTN4-202ENST00000337526 C4orf48Q5BLP8 95 aa9.91□□□□□ -0.82
RTN4-202ENST00000337526 ZNF73O43830 326 aaPredicted RBP9.9□□□□□ -0.82
RTN4-202ENST00000337526 IGKV4-1P06312 121 aa9.9□□□□□ -0.82
RTN4-202ENST00000337526 RPL28P46779 137 aaKnown RBP9.9□□□□□ -0.82
RTN4-202ENST00000337526 RAI1Q7Z5J4 1906 aaPredicted RBP9.9□□□□□ -0.82
RTN4-202ENST00000337526 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.89□□□□□ -0.83
RTN4-202ENST00000337526 UNQ6190/PRO20217Q6UXQ8 127 aa9.89□□□□□ -0.83
RTN4-202ENST00000337526 IGLV4-60A0A075B6I1 120 aa9.89□□□□□ -0.83
RTN4-202ENST00000337526 LY6G6DO95868 133 aa9.89□□□□□ -0.83
RTN4-202ENST00000337526 SNURFQ9Y675 71 aa9.89□□□□□ -0.83
RTN4-202ENST00000337526 NTM-AS1Q6ZSK4 140 aa9.89□□□□□ -0.83
RTN4-202ENST00000337526 FAM19A3Q7Z5A8 133 aa9.89□□□□□ -0.83
RTN4-202ENST00000337526 CSDC2Q9Y534 153 aaKnown RBP9.89□□□□□ -0.83
RTN4-202ENST00000337526 Q6JHZ5 121 aa9.88□□□□□ -0.83
RTN4-202ENST00000337526 MUC7Q8TAX7 377 aa9.88□□□□□ -0.83
RTN4-202ENST00000337526 PLA2G2AP14555 144 aa9.87□□□□□ -0.83
RTN4-202ENST00000337526 KRTAP10-9P60411 292 aa9.87□□□□□ -0.83
RTN4-202ENST00000337526 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.87□□□□□ -0.83
RTN4-202ENST00000337526 MUC4Q99102 2169 aa9.87□□□□□ -0.83
RTN4-202ENST00000337526 Q6ZSN1 163 aa9.87□□□□□ -0.83
RTN4-202ENST00000337526 WFDC10BQ8IUB3 73 aa9.87□□□□□ -0.83
RTN4-202ENST00000337526 NDUFC1O43677 76 aa9.86□□□□□ -0.83
RTN4-202ENST00000337526 IGLV1-51P01701 117 aa9.86□□□□□ -0.83
RTN4-202ENST00000337526 C9orf116Q5BN46 136 aaPredicted RBP9.86□□□□□ -0.83
RTN4-202ENST00000337526 BEAN1Q3B7T3 259 aa9.86□□□□□ -0.83
RTN4-202ENST00000337526 SHISA2Q6UWI4 295 aa9.86□□□□□ -0.83
RTN4-202ENST00000337526 DHRS4-AS1Q9P1J3 65 aa9.86□□□□□ -0.83
RTN4-202ENST00000337526 TRAV10A0A0B4J240 114 aa9.86□□□□□ -0.83
RTN4-202ENST00000337526 KIF25-AS1Q9Y6Z4 181 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms