RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 ICOSQ9Y6W8 199 aa11.98□□□□□ -0.49
CDC42EP4-201ENST00000335793 UBE2D4Q9Y2X8 147 aa11.97□□□□□ -0.49
CDC42EP4-201ENST00000335793 NF1P21359 2839 aa11.97□□□□□ -0.49
CDC42EP4-201ENST00000335793 IGKV3D-7A0A0C4DH55 119 aa11.96□□□□□ -0.49
CDC42EP4-201ENST00000335793 A0A1B0GX51 115 aa11.96□□□□□ -0.49
CDC42EP4-201ENST00000335793 RPL35AP18077 110 aaKnown RBP11.96□□□□□ -0.49
CDC42EP4-201ENST00000335793 CHCHD7Q9BUK0 85 aa11.96□□□□□ -0.5
CDC42EP4-201ENST00000335793 SETXQ7Z333 2677 aaKnown RBP11.95□□□□□ -0.5
CDC42EP4-201ENST00000335793 TINCRA0A1B0GVN0 87 aa11.95□□□□□ -0.5
CDC42EP4-201ENST00000335793 A0A087WVE0 104 aa11.94□□□□□ -0.5
CDC42EP4-201ENST00000335793 IGHV4-31P0DP07 118 aa11.94□□□□□ -0.5
CDC42EP4-201ENST00000335793 Q9H8V8 135 aa11.94□□□□□ -0.5
CDC42EP4-201ENST00000335793 KRTAP10-9P60411 292 aa11.94□□□□□ -0.5
CDC42EP4-201ENST00000335793 MIAQ16674 131 aa11.93□□□□□ -0.5
CDC42EP4-201ENST00000335793 Q96MF0 132 aa11.93□□□□□ -0.5
CDC42EP4-201ENST00000335793 DEFB114Q30KQ6 69 aa11.92□□□□□ -0.5
CDC42EP4-201ENST00000335793 A0A0U1RQV1 116 aa11.92□□□□□ -0.5
CDC42EP4-201ENST00000335793 RPL36AP83881 106 aaKnown RBP11.92□□□□□ -0.5
CDC42EP4-201ENST00000335793 RPL36ALQ969Q0 106 aaKnown RBP11.92□□□□□ -0.5
CDC42EP4-201ENST00000335793 PRIMA1Q86XR5 153 aa11.92□□□□□ -0.5
CDC42EP4-201ENST00000335793 TRBV30A0A0K0K1B3 111 aa11.91□□□□□ -0.5
CDC42EP4-201ENST00000335793 UBE2L6O14933 153 aa11.91□□□□□ -0.5
CDC42EP4-201ENST00000335793 TOMM7Q9P0U1 55 aa11.91□□□□□ -0.5
CDC42EP4-201ENST00000335793 COX6A2Q02221 97 aa11.9□□□□□ -0.5
CDC42EP4-201ENST00000335793 FAM104AQ969W3 186 aa11.9□□□□□ -0.5
CDC42EP4-201ENST00000335793 TRGV2A0A075B6R0 118 aa11.9□□□□□ -0.5
CDC42EP4-201ENST00000335793 WFDC11Q8NEX6 87 aa11.9□□□□□ -0.5
CDC42EP4-201ENST00000335793 LITAFQ99732 161 aa11.9□□□□□ -0.5
CDC42EP4-201ENST00000335793 UNC79Q9P2D8 2635 aa11.89□□□□□ -0.51
CDC42EP4-201ENST00000335793 H3BT86 120 aa11.89□□□□□ -0.51
CDC42EP4-201ENST00000335793 Q5XG85 94 aa11.89□□□□□ -0.51
CDC42EP4-201ENST00000335793 Q6ZTI0 123 aa11.89□□□□□ -0.51
CDC42EP4-201ENST00000335793 BAHCC1Q9P281 2608 aa11.89□□□□□ -0.51
CDC42EP4-201ENST00000335793 LINC00336Q6ZUF6 198 aa11.89□□□□□ -0.51
CDC42EP4-201ENST00000335793 LINC00643Q86TS7 51 aa11.89□□□□□ -0.51
CDC42EP4-201ENST00000335793 C2orf48Q96LS8 159 aa11.89□□□□□ -0.51
CDC42EP4-201ENST00000335793 NOP10Q9NPE3 64 aaKnown RBP11.89□□□□□ -0.51
CDC42EP4-201ENST00000335793 C4orf3Q8WVX3 66 aa11.88□□□□□ -0.51
CDC42EP4-201ENST00000335793 C11orf72Q8NBR9 251 aa11.88□□□□□ -0.51
CDC42EP4-201ENST00000335793 APCP25054 2843 aa11.87□□□□□ -0.51
CDC42EP4-201ENST00000335793 FAM240AA0A1B0GVK7 77 aa11.87□□□□□ -0.51
CDC42EP4-201ENST00000335793 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.87□□□□□ -0.51
CDC42EP4-201ENST00000335793 SPANXDQ9BXN6 97 aa11.87□□□□□ -0.51
CDC42EP4-201ENST00000335793 SPANXCQ9NY87 97 aa11.87□□□□□ -0.51
CDC42EP4-201ENST00000335793 HIVEP2P31629 2446 aa11.87□□□□□ -0.51
CDC42EP4-201ENST00000335793 CRYGAP11844 174 aa11.87□□□□□ -0.51
CDC42EP4-201ENST00000335793 DAZ2Q13117 558 aaKnown RBP11.87□□□□□ -0.51
CDC42EP4-201ENST00000335793 DAZ4Q86SG3 579 aaKnown RBP11.87□□□□□ -0.51
CDC42EP4-201ENST00000335793 DAZ3Q9NR90 486 aaKnown RBP11.87□□□□□ -0.51
CDC42EP4-201ENST00000335793 FLNAP21333 2647 aaKnown RBP11.86□□□□□ -0.51
CDC42EP4-201ENST00000335793 RPS28P62857 69 aaKnown RBP11.86□□□□□ -0.51
CDC42EP4-201ENST00000335793 ODF3L2Q3SX64 289 aa11.86□□□□□ -0.51
CDC42EP4-201ENST00000335793 A0A096LNT2 108 aa11.86□□□□□ -0.51
CDC42EP4-201ENST00000335793 J3QKU1 62 aa11.85□□□□□ -0.51
CDC42EP4-201ENST00000335793 IMUPQ9GZP8 106 aa11.85□□□□□ -0.51
CDC42EP4-201ENST00000335793 DEFB113Q30KQ7 82 aa11.85□□□□□ -0.51
CDC42EP4-201ENST00000335793 LST1O00453 97 aa11.84□□□□□ -0.51
CDC42EP4-201ENST00000335793 PLA2G2AP14555 144 aa11.84□□□□□ -0.51
CDC42EP4-201ENST00000335793 LINC00242Q5T6M2 205 aa11.84□□□□□ -0.51
CDC42EP4-201ENST00000335793 HIST1H4AP62805 103 aaKnown RBP11.84□□□□□ -0.51
CDC42EP4-201ENST00000335793 CCL24O00175 119 aa11.84□□□□□ -0.51
CDC42EP4-201ENST00000335793 PFN2P35080 140 aa11.84□□□□□ -0.51
CDC42EP4-201ENST00000335793 C1orf158Q8N1D5 194 aa11.84□□□□□ -0.51
CDC42EP4-201ENST00000335793 LINC00308Q8TCZ7 52 aa11.83□□□□□ -0.52
CDC42EP4-201ENST00000335793 K7EQD1 137 aa11.83□□□□□ -0.52
CDC42EP4-201ENST00000335793 ATOX1O00244 68 aa11.83□□□□□ -0.52
CDC42EP4-201ENST00000335793 Q9HAA7 133 aa11.83□□□□□ -0.52
CDC42EP4-201ENST00000335793 NDUFA1O15239 70 aa11.82□□□□□ -0.52
CDC42EP4-201ENST00000335793 TIRAPP58753 221 aa11.82□□□□□ -0.52
CDC42EP4-201ENST00000335793 WFDC10AQ9H1F0 79 aa11.82□□□□□ -0.52
CDC42EP4-201ENST00000335793 NIPBLQ6KC79 2804 aaeCLIP11.82□□□□□ -0.52
CDC42EP4-201ENST00000335793 TRGV4A0A0C4DH28 118 aa11.82□□□□□ -0.52
CDC42EP4-201ENST00000335793 ITPR3Q14573 2671 aa11.82□□□□□ -0.52
CDC42EP4-201ENST00000335793 BEAN1Q3B7T3 259 aa11.82□□□□□ -0.52
CDC42EP4-201ENST00000335793 MRAPQ8TCY5 172 aa11.82□□□□□ -0.52
CDC42EP4-201ENST00000335793 FAM236DA0A1B0GTK5 79 aa11.81□□□□□ -0.52
CDC42EP4-201ENST00000335793 FAM236CP0DP71 79 aa11.81□□□□□ -0.52
CDC42EP4-201ENST00000335793 TMEM258P61165 79 aa11.81□□□□□ -0.52
CDC42EP4-201ENST00000335793 TEP1Q99973 2627 aaKnown RBP11.81□□□□□ -0.52
CDC42EP4-201ENST00000335793 PIK3CD-AS1Q5SR53 167 aa11.8□□□□□ -0.52
CDC42EP4-201ENST00000335793 BAALC-AS2P0C853 105 aa11.8□□□□□ -0.52
CDC42EP4-201ENST00000335793 LOC100131303A0A0U1RQF7 123 aa11.79□□□□□ -0.52
CDC42EP4-201ENST00000335793 WFDC9Q8NEX5 89 aa11.79□□□□□ -0.52
CDC42EP4-201ENST00000335793 TMEM243Q9BU79 118 aa11.79□□□□□ -0.52
CDC42EP4-201ENST00000335793 FSHBP01225 129 aa11.79□□□□□ -0.52
CDC42EP4-201ENST00000335793 NTM-AS1Q6ZSK4 140 aa11.78□□□□□ -0.52
CDC42EP4-201ENST00000335793 ACYP1P07311 99 aa11.78□□□□□ -0.52
CDC42EP4-201ENST00000335793 C11orf68Q9H3H3 251 aaKnown RBP11.78□□□□□ -0.52
CDC42EP4-201ENST00000335793 SMIM1B2RUZ4 78 aa11.78□□□□□ -0.52
CDC42EP4-201ENST00000335793 LINC00158P58513 81 aa11.78□□□□□ -0.52
CDC42EP4-201ENST00000335793 COPS9Q8WXC6 57 aa11.78□□□□□ -0.52
CDC42EP4-201ENST00000335793 SEC61GP60059 68 aa11.77□□□□□ -0.52
CDC42EP4-201ENST00000335793 RPL18AQ02543 176 aaKnown RBP11.77□□□□□ -0.52
CDC42EP4-201ENST00000335793 A8MTW9 85 aa11.77□□□□□ -0.53
CDC42EP4-201ENST00000335793 DNAJC9-AS1A6NH13 148 aa11.77□□□□□ -0.53
CDC42EP4-201ENST00000335793 TIMM17BO60830 172 aa11.77□□□□□ -0.53
CDC42EP4-201ENST00000335793 FHL2Q14192 279 aa11.77□□□□□ -0.53
CDC42EP4-201ENST00000335793 DEFB130BP0DP73 79 aa11.76□□□□□ -0.53
CDC42EP4-201ENST00000335793 DEFB130AP0DP74 79 aa11.76□□□□□ -0.53
CDC42EP4-201ENST00000335793 Q8N2B8 174 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms