RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 Q8N2B8 174 aa10.03□□□□□ -0.8
SF1-202ENST00000334944 OR13C6PQ8NH95 151 aa10.03□□□□□ -0.8
SF1-202ENST00000334944 NBEAL2Q6ZNJ1 2754 aa10.03□□□□□ -0.8
SF1-202ENST00000334944 DAZ2Q13117 558 aaKnown RBP10.03□□□□□ -0.8
SF1-202ENST00000334944 DAZ4Q86SG3 579 aaKnown RBP10.03□□□□□ -0.8
SF1-202ENST00000334944 DAZ3Q9NR90 486 aaKnown RBP10.03□□□□□ -0.8
SF1-202ENST00000334944 C2orf48Q96LS8 159 aa10.03□□□□□ -0.8
SF1-202ENST00000334944 A0A087WVE0 104 aa10.02□□□□□ -0.81
SF1-202ENST00000334944 IGKV3D-7A0A0C4DH55 119 aa10.02□□□□□ -0.81
SF1-202ENST00000334944 DEFB121Q5J5C9 76 aa10.02□□□□□ -0.81
SF1-202ENST00000334944 LINC00643Q86TS7 51 aa10.02□□□□□ -0.81
SF1-202ENST00000334944 CITED2Q99967 270 aaPredicted RBP10.02□□□□□ -0.81
SF1-202ENST00000334944 GCN1Q92616 2671 aaKnown RBP10.02□□□□□ -0.81
SF1-202ENST00000334944 TRBV6-5A0A0K0K1A5 114 aa10.01□□□□□ -0.81
SF1-202ENST00000334944 F5H768 121 aa10.01□□□□□ -0.81
SF1-202ENST00000334944 LINC01600Q96MT4 127 aa10.01□□□□□ -0.81
SF1-202ENST00000334944 WFDC10AQ9H1F0 79 aa10.01□□□□□ -0.81
SF1-202ENST00000334944 ODF3L2Q3SX64 289 aa10.01□□□□□ -0.81
SF1-202ENST00000334944 IGLV4-3A0A075B6K6 122 aa10□□□□□ -0.81
SF1-202ENST00000334944 C20orf203Q8NBC4 194 aa10□□□□□ -0.81
SF1-202ENST00000334944 IGHV3-53P01767 116 aa10□□□□□ -0.81
SF1-202ENST00000334944 Q9HAA7 133 aa10□□□□□ -0.81
SF1-202ENST00000334944 TRACP01848 142 aa9.99□□□□□ -0.81
SF1-202ENST00000334944 IMUPQ9GZP8 106 aa9.99□□□□□ -0.81
SF1-202ENST00000334944 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.99□□□□□ -0.81
SF1-202ENST00000334944 A0A1B0GX51 115 aa9.99□□□□□ -0.81
SF1-202ENST00000334944 IGKV2-29A2NJV5 120 aaPredicted RBP9.99□□□□□ -0.81
SF1-202ENST00000334944 CCL24O00175 119 aa9.99□□□□□ -0.81
SF1-202ENST00000334944 TIRAPP58753 221 aa9.99□□□□□ -0.81
SF1-202ENST00000334944 MIAQ16674 131 aa9.99□□□□□ -0.81
SF1-202ENST00000334944 SMR3AQ99954 134 aa9.99□□□□□ -0.81
SF1-202ENST00000334944 VWFP04275 2813 aa9.99□□□□□ -0.81
SF1-202ENST00000334944 DPH3Q96FX2 82 aa9.98□□□□□ -0.81
SF1-202ENST00000334944 BAALC-AS2P0C853 105 aa9.98□□□□□ -0.81
SF1-202ENST00000334944 ZNF415Q09FC8 603 aa9.97□□□□□ -0.81
SF1-202ENST00000334944 C11orf72Q8NBR9 251 aa9.97□□□□□ -0.81
SF1-202ENST00000334944 STHQ8IWL8 128 aa9.96□□□□□ -0.81
SF1-202ENST00000334944 INSP01308 110 aa9.96□□□□□ -0.82
SF1-202ENST00000334944 CRYGAP11844 174 aa9.96□□□□□ -0.82
SF1-202ENST00000334944 TRGV1A0A0A0MS02 117 aa9.95□□□□□ -0.82
SF1-202ENST00000334944 PLA2G2AP14555 144 aa9.95□□□□□ -0.82
SF1-202ENST00000334944 C5orf38Q86SI9 138 aa9.95□□□□□ -0.82
SF1-202ENST00000334944 FAM104AQ969W3 186 aa9.95□□□□□ -0.82
SF1-202ENST00000334944 FAM218AQ96MZ4 157 aa9.95□□□□□ -0.82
SF1-202ENST00000334944 OTOGQ6ZRI0 2925 aa9.95□□□□□ -0.82
SF1-202ENST00000334944 ACYP1P07311 99 aa9.95□□□□□ -0.82
SF1-202ENST00000334944 KRTAP1-1Q07627 177 aa9.94□□□□□ -0.82
SF1-202ENST00000334944 C9orf129Q5T035 196 aaKnown RBP9.94□□□□□ -0.82
SF1-202ENST00000334944 LINC01006Q8NI28 216 aa9.94□□□□□ -0.82
SF1-202ENST00000334944 RPL35AP18077 110 aaKnown RBP9.94□□□□□ -0.82
SF1-202ENST00000334944 C1orf158Q8N1D5 194 aa9.94□□□□□ -0.82
SF1-202ENST00000334944 ANK3Q12955 4377 aaKnown RBP9.94□□□□□ -0.82
SF1-202ENST00000334944 IGHV1-58A0A0C4DH39 117 aa9.93□□□□□ -0.82
SF1-202ENST00000334944 LINC00467Q9BRT7 94 aa9.93□□□□□ -0.82
SF1-202ENST00000334944 SPANXDQ9BXN6 97 aa9.93□□□□□ -0.82
SF1-202ENST00000334944 SPANXCQ9NY87 97 aa9.93□□□□□ -0.82
SF1-202ENST00000334944 C22orf24Q9Y442 160 aa9.93□□□□□ -0.82
SF1-202ENST00000334944 Q6ZTI0 123 aa9.93□□□□□ -0.82
SF1-202ENST00000334944 A8MTW9 85 aa9.92□□□□□ -0.82
SF1-202ENST00000334944 WIPF1O43516 503 aa9.92□□□□□ -0.82
SF1-202ENST00000334944 Q5XG85 94 aa9.92□□□□□ -0.82
SF1-202ENST00000334944 VSIG2Q96IQ7 327 aa9.92□□□□□ -0.82
SF1-202ENST00000334944 ATOX1O00244 68 aa9.91□□□□□ -0.82
SF1-202ENST00000334944 CHCHD7Q9BUK0 85 aa9.91□□□□□ -0.82
SF1-202ENST00000334944 C14orf132Q9NPU4 83 aa9.91□□□□□ -0.82
SF1-202ENST00000334944 COX7A2LO14548 114 aa9.91□□□□□ -0.82
SF1-202ENST00000334944 RPS28P62857 69 aaKnown RBP9.91□□□□□ -0.82
SF1-202ENST00000334944 TENM1Q9UKZ4 2725 aa9.9□□□□□ -0.82
SF1-202ENST00000334944 RPL18AQ02543 176 aaKnown RBP9.9□□□□□ -0.83
SF1-202ENST00000334944 TMEM86BQ8N661 226 aa9.9□□□□□ -0.83
SF1-202ENST00000334944 NOP10Q9NPE3 64 aaKnown RBP9.9□□□□□ -0.83
SF1-202ENST00000334944 SOSTDC1Q6X4U4 206 aa9.89□□□□□ -0.83
SF1-202ENST00000334944 WFDC9Q8NEX5 89 aa9.89□□□□□ -0.83
SF1-202ENST00000334944 CDKN2A-AS1Q9UH64 79 aa9.89□□□□□ -0.83
SF1-202ENST00000334944 CIRBPQ14011 172 aaKnown RBP9.88□□□□□ -0.83
SF1-202ENST00000334944 LINC00308Q8TCZ7 52 aa9.88□□□□□ -0.83
SF1-202ENST00000334944 Q9H8V8 135 aa9.88□□□□□ -0.83
SF1-202ENST00000334944 UBE2D4Q9Y2X8 147 aa9.88□□□□□ -0.83
SF1-202ENST00000334944 PYGO1Q9Y3Y4 419 aa9.88□□□□□ -0.83
SF1-202ENST00000334944 ATRQ13535 2644 aa9.88□□□□□ -0.83
SF1-202ENST00000334944 ATP5G1P05496 136 aa9.88□□□□□ -0.83
SF1-202ENST00000334944 MRPS36P82909 103 aaKnown RBP9.88□□□□□ -0.83
SF1-202ENST00000334944 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.88□□□□□ -0.83
SF1-202ENST00000334944 HILS1P60008 231 aa9.87□□□□□ -0.83
SF1-202ENST00000334944 HIST1H4AP62805 103 aaKnown RBP9.87□□□□□ -0.83
SF1-202ENST00000334944 PIK3CD-AS1Q5SR53 167 aa9.87□□□□□ -0.83
SF1-202ENST00000334944 KMT2BQ9UMN6 2715 aaPredicted RBP9.87□□□□□ -0.83
SF1-202ENST00000334944 CXCL5P42830 114 aa9.87□□□□□ -0.83
SF1-202ENST00000334944 LINC00846Q9NV44 126 aa9.87□□□□□ -0.83
SF1-202ENST00000334944 DNAL4O96015 105 aa9.86□□□□□ -0.83
SF1-202ENST00000334944 GIG44P09565 113 aaPredicted RBP9.86□□□□□ -0.83
SF1-202ENST00000334944 TMEM258P61165 79 aa9.86□□□□□ -0.83
SF1-202ENST00000334944 FHL2Q14192 279 aa9.86□□□□□ -0.83
SF1-202ENST00000334944 DGAT2L7PQ6IED9 249 aa9.86□□□□□ -0.83
SF1-202ENST00000334944 SERP2Q8N6R1 65 aa9.86□□□□□ -0.83
SF1-202ENST00000334944 UPK3BQ9BT76 320 aa9.86□□□□□ -0.83
SF1-202ENST00000334944 LOC100131303A0A0U1RQF7 123 aa9.86□□□□□ -0.83
SF1-202ENST00000334944 USP17L23D6RBM5 183 aa9.86□□□□□ -0.83
SF1-202ENST00000334944 BEAN1Q3B7T3 259 aa9.86□□□□□ -0.83
SF1-202ENST00000334944 LINC01561Q8N1V8 128 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms