RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 PRO0255Q9UI72 69 aa14.21□□□□□ -0.13
RIPPLY3-201ENST00000329553 A4D1N5 150 aa14.21□□□□□ -0.14
RIPPLY3-201ENST00000329553 MDFIQ99750 246 aa14.21□□□□□ -0.14
RIPPLY3-201ENST00000329553 EIF4EBP3O60516 100 aaPredicted RBP14.2□□□□□ -0.14
RIPPLY3-201ENST00000329553 TCL1BO95988 128 aa14.2□□□□□ -0.14
RIPPLY3-201ENST00000329553 SPART-AS1P0CW21 52 aa14.2□□□□□ -0.14
RIPPLY3-201ENST00000329553 IGHV3-30-3P0DP02 117 aa14.2□□□□□ -0.14
RIPPLY3-201ENST00000329553 SBSPONQ8IVN8 264 aa14.2□□□□□ -0.14
RIPPLY3-201ENST00000329553 GYPEP15421 78 aa14.19□□□□□ -0.14
RIPPLY3-201ENST00000329553 Q6ZUT4 128 aa14.19□□□□□ -0.14
RIPPLY3-201ENST00000329553 SIGMAR1Q99720 223 aa14.19□□□□□ -0.14
RIPPLY3-201ENST00000329553 A0A0J9YXY3 114 aa14.19□□□□□ -0.14
RIPPLY3-201ENST00000329553 TMEM238C9JI98 176 aa14.19□□□□□ -0.14
RIPPLY3-201ENST00000329553 FOXI1Q12951 378 aa14.19□□□□□ -0.14
RIPPLY3-201ENST00000329553 TIMM21Q9BVV7 248 aa14.19□□□□□ -0.14
RIPPLY3-201ENST00000329553 A0A0B4J2C4 111 aa14.18□□□□□ -0.14
RIPPLY3-201ENST00000329553 MUSTN1Q8IVN3 82 aa14.18□□□□□ -0.14
RIPPLY3-201ENST00000329553 DGAT2L7PQ6IED9 249 aa14.17□□□□□ -0.14
RIPPLY3-201ENST00000329553 TINCRA0A1B0GVN0 87 aa14.17□□□□□ -0.14
RIPPLY3-201ENST00000329553 IGHV3-33P01772 117 aa14.17□□□□□ -0.14
RIPPLY3-201ENST00000329553 TMEM243Q9BU79 118 aa14.17□□□□□ -0.14
RIPPLY3-201ENST00000329553 IGHV1-58A0A0C4DH39 117 aa14.16□□□□□ -0.14
RIPPLY3-201ENST00000329553 PAX4O43316 350 aa14.16□□□□□ -0.14
RIPPLY3-201ENST00000329553 LITAFQ99732 161 aa14.16□□□□□ -0.14
RIPPLY3-201ENST00000329553 PRB2P02812 416 aaPredicted RBP14.15□□□□□ -0.14
RIPPLY3-201ENST00000329553 ATP5G1P05496 136 aa14.15□□□□□ -0.14
RIPPLY3-201ENST00000329553 VSIG2Q96IQ7 327 aa14.15□□□□□ -0.14
RIPPLY3-201ENST00000329553 TRBV6-8A0A0A6YYG3 113 aa14.14□□□□□ -0.15
RIPPLY3-201ENST00000329553 TRAV8-3A0A0A6YYJ7 113 aa14.14□□□□□ -0.15
RIPPLY3-201ENST00000329553 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.14□□□□□ -0.15
RIPPLY3-201ENST00000329553 SCGB1A1P11684 91 aa14.14□□□□□ -0.15
RIPPLY3-201ENST00000329553 CSDC2Q9Y534 153 aaKnown RBP14.14□□□□□ -0.15
RIPPLY3-201ENST00000329553 SCGB1C2P0DMR2 95 aa14.13□□□□□ -0.15
RIPPLY3-201ENST00000329553 NOTCH1P46531 2555 aa14.13□□□□□ -0.15
RIPPLY3-201ENST00000329553 UBE2L6O14933 153 aa14.13□□□□□ -0.15
RIPPLY3-201ENST00000329553 ERG28Q9UKR5 140 aa14.13□□□□□ -0.15
RIPPLY3-201ENST00000329553 F5H768 121 aa14.12□□□□□ -0.15
RIPPLY3-201ENST00000329553 TEN1Q86WV5 123 aa14.12□□□□□ -0.15
RIPPLY3-201ENST00000329553 A0A096LPF7 62 aa14.11□□□□□ -0.15
RIPPLY3-201ENST00000329553 HTN3P15516 51 aa14.11□□□□□ -0.15
RIPPLY3-201ENST00000329553 CDC42SE2Q9NRR3 84 aa14.11□□□□□ -0.15
RIPPLY3-201ENST00000329553 NDUFA12Q9UI09 145 aa14.11□□□□□ -0.15
RIPPLY3-201ENST00000329553 TRAV26-1A0A087WT03 109 aa14.1□□□□□ -0.15
RIPPLY3-201ENST00000329553 H7C423 109 aa14.1□□□□□ -0.15
RIPPLY3-201ENST00000329553 SMAGPQ0VAQ4 97 aa14.1□□□□□ -0.15
RIPPLY3-201ENST00000329553 GAGE6Q13070 117 aa14.1□□□□□ -0.15
RIPPLY3-201ENST00000329553 SPANXDQ9BXN6 97 aa14.1□□□□□ -0.15
RIPPLY3-201ENST00000329553 SPANXCQ9NY87 97 aa14.1□□□□□ -0.15
RIPPLY3-201ENST00000329553 CARD19Q96LW7 228 aa14.1□□□□□ -0.15
RIPPLY3-201ENST00000329553 PPDPFLQ8WWR9 84 aa14.09□□□□□ -0.15
RIPPLY3-201ENST00000329553 ADAMTSL4-AS1Q5T5F5 129 aa14.09□□□□□ -0.15
RIPPLY3-201ENST00000329553 CHCHD5Q9BSY4 110 aa14.09□□□□□ -0.15
RIPPLY3-201ENST00000329553 K7EIL1 84 aa14.08□□□□□ -0.16
RIPPLY3-201ENST00000329553 SPINK8P0C7L1 97 aa14.08□□□□□ -0.16
RIPPLY3-201ENST00000329553 M0QXV9 152 aa14.07□□□□□ -0.16
RIPPLY3-201ENST00000329553 ZFAND6Q6FIF0 208 aa14.07□□□□□ -0.16
RIPPLY3-201ENST00000329553 TMEM101Q96IK0 257 aa14.07□□□□□ -0.16
RIPPLY3-201ENST00000329553 IGLV5-45A0A087WSX0 123 aa14.07□□□□□ -0.16
RIPPLY3-201ENST00000329553 CDIP1Q9H305 208 aa14.07□□□□□ -0.16
RIPPLY3-201ENST00000329553 TIRAPP58753 221 aa14.06□□□□□ -0.16
RIPPLY3-201ENST00000329553 GEMIN7Q9H840 131 aaKnown RBP14.06□□□□□ -0.16
RIPPLY3-201ENST00000329553 H7C2G1 150 aa14.06□□□□□ -0.16
RIPPLY3-201ENST00000329553 MIAQ16674 131 aa14.06□□□□□ -0.16
RIPPLY3-201ENST00000329553 C11orf68Q9H3H3 251 aaKnown RBP14.06□□□□□ -0.16
RIPPLY3-201ENST00000329553 NBEAL1Q6ZS30 2694 aa14.05□□□□□ -0.16
RIPPLY3-201ENST00000329553 IGLV4-60A0A075B6I1 120 aa14.05□□□□□ -0.16
RIPPLY3-201ENST00000329553 TRAV13-1A0A0B4J241 112 aa14.05□□□□□ -0.16
RIPPLY3-201ENST00000329553 TRBV30A0A0K0K1B3 111 aa14.05□□□□□ -0.16
RIPPLY3-201ENST00000329553 COX6A2Q02221 97 aa14.05□□□□□ -0.16
RIPPLY3-201ENST00000329553 KPRPQ5T749 579 aaPredicted RBP14.05□□□□□ -0.16
RIPPLY3-201ENST00000329553 CDKN2A-AS1Q9UH64 79 aa14.05□□□□□ -0.16
RIPPLY3-201ENST00000329553 SLC25A20O43772 301 aa14.04□□□□□ -0.16
RIPPLY3-201ENST00000329553 PRSS2P07478 247 aa14.04□□□□□ -0.16
RIPPLY3-201ENST00000329553 LINC00242Q5T6M2 205 aa14.04□□□□□ -0.16
RIPPLY3-201ENST00000329553 ANKRD29Q8N6D5 301 aa14.04□□□□□ -0.16
RIPPLY3-201ENST00000329553 A0A0J9YWU9 116 aa14.03□□□□□ -0.16
RIPPLY3-201ENST00000329553 DEFB121Q5J5C9 76 aa14.03□□□□□ -0.16
RIPPLY3-201ENST00000329553 TIMM17BO60830 172 aa14.03□□□□□ -0.16
RIPPLY3-201ENST00000329553 Q1RN00 199 aa14.03□□□□□ -0.16
RIPPLY3-201ENST00000329553 C9JAW5 83 aa14.02□□□□□ -0.16
RIPPLY3-201ENST00000329553 MRPL23Q16540 153 aaKnown RBP14.02□□□□□ -0.16
RIPPLY3-201ENST00000329553 FAM19A3Q7Z5A8 133 aa14.02□□□□□ -0.16
RIPPLY3-201ENST00000329553 TENM3Q9P273 2699 aa14.02□□□□□ -0.17
RIPPLY3-201ENST00000329553 TRIAP1O43715 76 aa14.01□□□□□ -0.17
RIPPLY3-201ENST00000329553 ATXN8Q156A1 80 aa14.01□□□□□ -0.17
RIPPLY3-201ENST00000329553 MGAM2Q2M2H8 2515 aa14.01□□□□□ -0.17
RIPPLY3-201ENST00000329553 TMEM262E9PQX1 116 aa14□□□□□ -0.17
RIPPLY3-201ENST00000329553 NDUFA1O15239 70 aa14□□□□□ -0.17
RIPPLY3-201ENST00000329553 Q6ZTC4 211 aa14□□□□□ -0.17
RIPPLY3-201ENST00000329553 MRAPQ8TCY5 172 aa14□□□□□ -0.17
RIPPLY3-201ENST00000329553 LINC01600Q96MT4 127 aa14□□□□□ -0.17
RIPPLY3-201ENST00000329553 HERVK_113P63121 156 aa13.99□□□□□ -0.17
RIPPLY3-201ENST00000329553 ICOSQ9Y6W8 199 aa13.99□□□□□ -0.17
RIPPLY3-201ENST00000329553 IGLV5-39A0A0G2JS06 123 aa13.98□□□□□ -0.17
RIPPLY3-201ENST00000329553 IFITM1P13164 125 aa13.98□□□□□ -0.17
RIPPLY3-201ENST00000329553 LINC01620Q4KN68 170 aa13.98□□□□□ -0.17
RIPPLY3-201ENST00000329553 TM2D3Q9BRN9 247 aa13.98□□□□□ -0.17
RIPPLY3-201ENST00000329553 IGKV3OR2-268A0A0C4DH90 116 aa13.97□□□□□ -0.17
RIPPLY3-201ENST00000329553 NANOS2P60321 138 aaKnown RBP13.97□□□□□ -0.17
RIPPLY3-201ENST00000329553 A0A1B0GUV1 79 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms