RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 ZFYVE26Q68DK2 2539 aa12.47□□□□□ -0.41
GABRB3-202ENST00000311550 COX6A2Q02221 97 aa12.47□□□□□ -0.41
GABRB3-202ENST00000311550 UPK3BQ9BT76 320 aa12.47□□□□□ -0.41
GABRB3-202ENST00000311550 LINC00694P0DN24 101 aa12.47□□□□□ -0.41
GABRB3-202ENST00000311550 SMIM11BQ8TCY0 68 aa12.47□□□□□ -0.41
GABRB3-202ENST00000311550 RANBP2P49792 3224 aaKnown RBP12.46□□□□□ -0.41
GABRB3-202ENST00000311550 ADAMTSL4-AS1Q5T5F5 129 aa12.46□□□□□ -0.42
GABRB3-202ENST00000311550 Q6ZSN1 163 aa12.46□□□□□ -0.42
GABRB3-202ENST00000311550 PCSK5Q92824 1860 aa12.46□□□□□ -0.42
GABRB3-202ENST00000311550 SCXQ7RTU7 201 aa12.45□□□□□ -0.42
GABRB3-202ENST00000311550 POLQO75417 2590 aa12.44□□□□□ -0.42
GABRB3-202ENST00000311550 NDUFS5O43920 106 aa12.44□□□□□ -0.42
GABRB3-202ENST00000311550 IGKV2-24A0A0C4DH68 120 aa12.44□□□□□ -0.42
GABRB3-202ENST00000311550 SMIM1B2RUZ4 78 aa12.44□□□□□ -0.42
GABRB3-202ENST00000311550 J3KT08 172 aa12.44□□□□□ -0.42
GABRB3-202ENST00000311550 C1orf158Q8N1D5 194 aa12.44□□□□□ -0.42
GABRB3-202ENST00000311550 MKI67P46013 3256 aaKnown RBP12.43□□□□□ -0.42
GABRB3-202ENST00000311550 LY6G6DO95868 133 aa12.43□□□□□ -0.42
GABRB3-202ENST00000311550 CD164L2Q6UWJ8 174 aa12.43□□□□□ -0.42
GABRB3-202ENST00000311550 ENHOQ6UWT2 76 aa12.43□□□□□ -0.42
GABRB3-202ENST00000311550 MIFP14174 115 aa12.43□□□□□ -0.42
GABRB3-202ENST00000311550 BRI3O95415 125 aa12.43□□□□□ -0.42
GABRB3-202ENST00000311550 PDE6GP18545 87 aa12.42□□□□□ -0.42
GABRB3-202ENST00000311550 DEFB131BA0A096LNP1 70 aa12.42□□□□□ -0.42
GABRB3-202ENST00000311550 PKD1L2Q7Z442 2459 aa12.41□□□□□ -0.42
GABRB3-202ENST00000311550 PTPRBP23467 1997 aa12.41□□□□□ -0.42
GABRB3-202ENST00000311550 AMELXQ99217 191 aa12.41□□□□□ -0.42
GABRB3-202ENST00000311550 LRRK2Q5S007 2527 aa12.41□□□□□ -0.42
GABRB3-202ENST00000311550 HILS1P60008 231 aa12.41□□□□□ -0.42
GABRB3-202ENST00000311550 SMR3AQ99954 134 aa12.41□□□□□ -0.42
GABRB3-202ENST00000311550 A0A0C4DFX4 3053 aa12.4□□□□□ -0.42
GABRB3-202ENST00000311550 C20orf197Q8N268 126 aa12.4□□□□□ -0.42
GABRB3-202ENST00000311550 KIF25-AS1Q9Y6Z4 181 aa12.4□□□□□ -0.42
GABRB3-202ENST00000311550 TMEM258P61165 79 aa12.4□□□□□ -0.42
GABRB3-202ENST00000311550 UQCRQO14949 82 aa12.4□□□□□ -0.42
GABRB3-202ENST00000311550 AGRNO00468 2067 aa12.4□□□□□ -0.43
GABRB3-202ENST00000311550 UBE2AP49459 152 aa12.39□□□□□ -0.43
GABRB3-202ENST00000311550 MTORP42345 2549 aa12.39□□□□□ -0.43
GABRB3-202ENST00000311550 CLUHP3Q96NS8 147 aa12.39□□□□□ -0.43
GABRB3-202ENST00000311550 IGLV4-60A0A075B6I1 120 aa12.39□□□□□ -0.43
GABRB3-202ENST00000311550 BRCA2P51587 3418 aa12.38□□□□□ -0.43
GABRB3-202ENST00000311550 Q6ZQY7 126 aa12.38□□□□□ -0.43
GABRB3-202ENST00000311550 CCDC179H3BU77 68 aa12.37□□□□□ -0.43
GABRB3-202ENST00000311550 CHD9Q3L8U1 2897 aa12.37□□□□□ -0.43
GABRB3-202ENST00000311550 BPY2O14599 106 aa12.36□□□□□ -0.43
GABRB3-202ENST00000311550 HIGD2AQ9BW72 106 aa12.36□□□□□ -0.43
GABRB3-202ENST00000311550 ZNF462Q96JM2 2506 aa12.36□□□□□ -0.43
GABRB3-202ENST00000311550 C3orf22Q8N5N4 141 aa12.35□□□□□ -0.43
GABRB3-202ENST00000311550 LAMA3Q16787 3333 aa12.35□□□□□ -0.43
GABRB3-202ENST00000311550 IGKV2-28A0A075B6P5 120 aa12.34□□□□□ -0.43
GABRB3-202ENST00000311550 IGKV2D-28P01615 120 aa12.34□□□□□ -0.43
GABRB3-202ENST00000311550 PLA2G2AP14555 144 aa12.34□□□□□ -0.43
GABRB3-202ENST00000311550 C9orf116Q5BN46 136 aaPredicted RBP12.34□□□□□ -0.43
GABRB3-202ENST00000311550 KPRPQ5T749 579 aaPredicted RBP12.34□□□□□ -0.43
GABRB3-202ENST00000311550 IGLV1-51P01701 117 aa12.33□□□□□ -0.43
GABRB3-202ENST00000311550 LELP1Q5T871 98 aa12.33□□□□□ -0.44
GABRB3-202ENST00000311550 Q8IZM0 81 aa12.33□□□□□ -0.44
GABRB3-202ENST00000311550 LINC01546A6NGU7 62 aa12.33□□□□□ -0.44
GABRB3-202ENST00000311550 LINC00315P59091 139 aa12.33□□□□□ -0.44
GABRB3-202ENST00000311550 SYCNQ0VAF6 134 aa12.33□□□□□ -0.44
GABRB3-202ENST00000311550 PRR3P79522 188 aaKnown RBP12.33□□□□□ -0.44
GABRB3-202ENST00000311550 BEAN1Q3B7T3 259 aa12.32□□□□□ -0.44
GABRB3-202ENST00000311550 MP68P56378 58 aa12.32□□□□□ -0.44
GABRB3-202ENST00000311550 FAM19A5Q7Z5A7 132 aaPredicted RBP12.32□□□□□ -0.44
GABRB3-202ENST00000311550 WFDC9Q8NEX5 89 aa12.31□□□□□ -0.44
GABRB3-202ENST00000311550 A0A096LNI7 61 aa12.31□□□□□ -0.44
GABRB3-202ENST00000311550 FHL2Q14192 279 aa12.31□□□□□ -0.44
GABRB3-202ENST00000311550 UNQ6190/PRO20217Q6UXQ8 127 aa12.31□□□□□ -0.44
GABRB3-202ENST00000311550 CYSRT1A8MQ03 144 aa12.3□□□□□ -0.44
GABRB3-202ENST00000311550 CCKP06307 115 aa12.3□□□□□ -0.44
GABRB3-202ENST00000311550 USP17L23D6RBM5 183 aa12.3□□□□□ -0.44
GABRB3-202ENST00000311550 ATP5EP2Q5VTU8 51 aa12.3□□□□□ -0.44
GABRB3-202ENST00000311550 DOPEY1Q5JWR5 2465 aa12.3□□□□□ -0.44
GABRB3-202ENST00000311550 NDUFB1O75438 58 aa12.3□□□□□ -0.44
GABRB3-202ENST00000311550 A0A087WZ39 114 aa12.29□□□□□ -0.44
GABRB3-202ENST00000311550 C3orf84H3BNL1 204 aa12.29□□□□□ -0.44
GABRB3-202ENST00000311550 KIR2DL5BQ8NHK3 375 aa12.29□□□□□ -0.44
GABRB3-202ENST00000311550 IMUPQ9GZP8 106 aa12.29□□□□□ -0.44
GABRB3-202ENST00000311550 A0A087WYN8 130 aa12.29□□□□□ -0.44
GABRB3-202ENST00000311550 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.28□□□□□ -0.44
GABRB3-202ENST00000311550 FAM19A4Q96LR4 140 aa12.28□□□□□ -0.44
GABRB3-202ENST00000311550 OXLD1Q5BKU9 147 aa12.28□□□□□ -0.44
GABRB3-202ENST00000311550 CSDC2Q9Y534 153 aaKnown RBP12.27□□□□□ -0.44
GABRB3-202ENST00000311550 PKIGQ9Y2B9 76 aa12.27□□□□□ -0.45
GABRB3-202ENST00000311550 IGHV4-30-4P0DP06 118 aa12.27□□□□□ -0.45
GABRB3-202ENST00000311550 FAM19A1Q7Z5A9 133 aa12.27□□□□□ -0.45
GABRB3-202ENST00000311550 RPL28P46779 137 aaKnown RBP12.26□□□□□ -0.45
GABRB3-202ENST00000311550 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.26□□□□□ -0.45
GABRB3-202ENST00000311550 COX17Q14061 63 aa12.26□□□□□ -0.45
GABRB3-202ENST00000311550 H0Y9J4 135 aa12.26□□□□□ -0.45
GABRB3-202ENST00000311550 C5orf47Q569G3 176 aa12.25□□□□□ -0.45
GABRB3-202ENST00000311550 COL27A1Q8IZC6 1860 aaPredicted RBP12.25□□□□□ -0.45
GABRB3-202ENST00000311550 Q9UF83 564 aa12.25□□□□□ -0.45
GABRB3-202ENST00000311550 LAMA2P24043 3122 aaKnown RBP12.24□□□□□ -0.45
GABRB3-202ENST00000311550 ZNF73O43830 326 aaPredicted RBP12.24□□□□□ -0.45
GABRB3-202ENST00000311550 C11orf72Q8NBR9 251 aa12.24□□□□□ -0.45
GABRB3-202ENST00000311550 FAM240AA0A1B0GVK7 77 aa12.24□□□□□ -0.45
GABRB3-202ENST00000311550 M0R378 163 aa12.24□□□□□ -0.45
GABRB3-202ENST00000311550 SERP2Q8N6R1 65 aa12.24□□□□□ -0.45
GABRB3-202ENST00000311550 RPL37AP8A6NKH3 93 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms