RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 GAGE12HA6NDE8 117 aa13.98□□□□□ -0.17
LRFN4-201ENST00000309602 UBE2L6O14933 153 aa13.98□□□□□ -0.17
LRFN4-201ENST00000309602 PF4P02776 101 aa13.98□□□□□ -0.17
LRFN4-201ENST00000309602 CKS1BP61024 79 aa13.97□□□□□ -0.17
LRFN4-201ENST00000309602 FHL2Q14192 279 aa13.97□□□□□ -0.17
LRFN4-201ENST00000309602 LINC00482Q8N8I6 264 aa13.97□□□□□ -0.17
LRFN4-201ENST00000309602 TRIAP1O43715 76 aa13.96□□□□□ -0.17
LRFN4-201ENST00000309602 BAHCC1Q9P281 2608 aa13.96□□□□□ -0.17
LRFN4-201ENST00000309602 F5H768 121 aa13.96□□□□□ -0.17
LRFN4-201ENST00000309602 LY6G6DO95868 133 aa13.96□□□□□ -0.17
LRFN4-201ENST00000309602 TEN1Q86WV5 123 aa13.96□□□□□ -0.17
LRFN4-201ENST00000309602 ZNF625Q96I27 306 aaPredicted RBP13.96□□□□□ -0.17
LRFN4-201ENST00000309602 TRBV30A0A0K0K1B3 111 aa13.95□□□□□ -0.18
LRFN4-201ENST00000309602 CARD19Q96LW7 228 aa13.95□□□□□ -0.18
LRFN4-201ENST00000309602 SPATA25Q9BR10 227 aa13.95□□□□□ -0.18
LRFN4-201ENST00000309602 IFITM1P13164 125 aa13.95□□□□□ -0.18
LRFN4-201ENST00000309602 RNF183Q96D59 192 aa13.95□□□□□ -0.18
LRFN4-201ENST00000309602 C9JAW5 83 aa13.94□□□□□ -0.18
LRFN4-201ENST00000309602 ICOSQ9Y6W8 199 aa13.93□□□□□ -0.18
LRFN4-201ENST00000309602 SLC25A20O43772 301 aa13.93□□□□□ -0.18
LRFN4-201ENST00000309602 GAGE6Q13070 117 aa13.93□□□□□ -0.18
LRFN4-201ENST00000309602 CIRBPQ14011 172 aaKnown RBP13.93□□□□□ -0.18
LRFN4-201ENST00000309602 ANKRD29Q8N6D5 301 aa13.93□□□□□ -0.18
LRFN4-201ENST00000309602 A0A0U1RRA0 63 aa13.92□□□□□ -0.18
LRFN4-201ENST00000309602 CRLF1O75462 422 aa13.92□□□□□ -0.18
LRFN4-201ENST00000309602 PPDPFLQ8WWR9 84 aa13.92□□□□□ -0.18
LRFN4-201ENST00000309602 H7C423 109 aa13.92□□□□□ -0.18
LRFN4-201ENST00000309602 ATXN8Q156A1 80 aa13.92□□□□□ -0.18
LRFN4-201ENST00000309602 DEFB130BP0DP73 79 aa13.91□□□□□ -0.18
LRFN4-201ENST00000309602 DEFB130AP0DP74 79 aa13.91□□□□□ -0.18
LRFN4-201ENST00000309602 SPATA3Q8NHX4 192 aa13.91□□□□□ -0.18
LRFN4-201ENST00000309602 LINC00308Q8TCZ7 52 aa13.91□□□□□ -0.18
LRFN4-201ENST00000309602 NSD1Q96L73 2696 aaPredicted RBP13.91□□□□□ -0.18
LRFN4-201ENST00000309602 TRBV6-8A0A0A6YYG3 113 aa13.9□□□□□ -0.18
LRFN4-201ENST00000309602 PRIMA1Q86XR5 153 aa13.9□□□□□ -0.18
LRFN4-201ENST00000309602 LINC01620Q4KN68 170 aa13.9□□□□□ -0.18
LRFN4-201ENST00000309602 IGLV4-60A0A075B6I1 120 aa13.89□□□□□ -0.19
LRFN4-201ENST00000309602 RPL13AP40429 203 aaKnown RBP13.89□□□□□ -0.19
LRFN4-201ENST00000309602 KIR2DL5BQ8NHK3 375 aa13.88□□□□□ -0.19
LRFN4-201ENST00000309602 IGKV3OR2-268A0A0C4DH90 116 aa13.88□□□□□ -0.19
LRFN4-201ENST00000309602 M0QXV9 152 aa13.88□□□□□ -0.19
LRFN4-201ENST00000309602 SOSTDC1Q6X4U4 206 aa13.88□□□□□ -0.19
LRFN4-201ENST00000309602 LINC00612Q8N6U2 182 aa13.88□□□□□ -0.19
LRFN4-201ENST00000309602 MEIG1Q5JSS6 88 aa13.87□□□□□ -0.19
LRFN4-201ENST00000309602 CFAP161Q6P656 301 aa13.87□□□□□ -0.19
LRFN4-201ENST00000309602 CHCHD5Q9BSY4 110 aa13.87□□□□□ -0.19
LRFN4-201ENST00000309602 X6R8D5 127 aa13.87□□□□□ -0.19
LRFN4-201ENST00000309602 FN1P02751 2386 aaKnown RBP13.87□□□□□ -0.19
LRFN4-201ENST00000309602 CDIP1Q9H305 208 aa13.86□□□□□ -0.19
LRFN4-201ENST00000309602 INAFM1C9JVW0 142 aa13.85□□□□□ -0.19
LRFN4-201ENST00000309602 COX6CP09669 75 aa13.84□□□□□ -0.19
LRFN4-201ENST00000309602 HERV-K104P63124 156 aa13.84□□□□□ -0.19
LRFN4-201ENST00000309602 CLEC2BQ92478 149 aa13.84□□□□□ -0.19
LRFN4-201ENST00000309602 VWFP04275 2813 aa13.84□□□□□ -0.19
LRFN4-201ENST00000309602 F8P00451 2351 aa13.83□□□□□ -0.2
LRFN4-201ENST00000309602 TRBV10-2A0A0K0K1G8 114 aa13.83□□□□□ -0.2
LRFN4-201ENST00000309602 GYPEP15421 78 aa13.82□□□□□ -0.2
LRFN4-201ENST00000309602 COX7B2Q8TF08 81 aa13.81□□□□□ -0.2
LRFN4-201ENST00000309602 LINC01600Q96MT4 127 aa13.81□□□□□ -0.2
LRFN4-201ENST00000309602 C9orf66Q5T8R8 295 aa13.81□□□□□ -0.2
LRFN4-201ENST00000309602 NTN5Q8WTR8 489 aaPredicted RBP13.81□□□□□ -0.2
LRFN4-201ENST00000309602 TEP1Q99973 2627 aaKnown RBP13.8□□□□□ -0.2
LRFN4-201ENST00000309602 IGHV3OR16-9A0A0B4J2B5 98 aa13.8□□□□□ -0.2
LRFN4-201ENST00000309602 COPS9Q8WXC6 57 aa13.8□□□□□ -0.2
LRFN4-201ENST00000309602 TOMM7Q9P0U1 55 aa13.8□□□□□ -0.2
LRFN4-201ENST00000309602 SMIM9A6NGZ8 99 aa13.79□□□□□ -0.2
LRFN4-201ENST00000309602 LST1O00453 97 aa13.79□□□□□ -0.2
LRFN4-201ENST00000309602 NBEAL2Q6ZNJ1 2754 aa13.78□□□□□ -0.2
LRFN4-201ENST00000309602 FAM222AQ5U5X8 452 aa13.78□□□□□ -0.2
LRFN4-201ENST00000309602 PRO0255Q9UI72 69 aa13.76□□□□□ -0.21
LRFN4-201ENST00000309602 C2orf82Q6UX34 121 aa13.76□□□□□ -0.21
LRFN4-201ENST00000309602 C5orf38Q86SI9 138 aa13.76□□□□□ -0.21
LRFN4-201ENST00000309602 A0A087WZ39 114 aa13.75□□□□□ -0.21
LRFN4-201ENST00000309602 A0A096LPF7 62 aa13.75□□□□□ -0.21
LRFN4-201ENST00000309602 LINC00959A0A1B0GUT2 108 aa13.75□□□□□ -0.21
LRFN4-201ENST00000309602 DEFB135Q30KP9 77 aa13.75□□□□□ -0.21
LRFN4-201ENST00000309602 TEX49A0A1B0GTD5 131 aa13.75□□□□□ -0.21
LRFN4-201ENST00000309602 DEFB4AO15263 64 aa13.75□□□□□ -0.21
LRFN4-201ENST00000309602 XGP55808 180 aa13.74□□□□□ -0.21
LRFN4-201ENST00000309602 SHISA2Q6UWI4 295 aa13.74□□□□□ -0.21
LRFN4-201ENST00000309602 TMEM262E9PQX1 116 aa13.74□□□□□ -0.21
LRFN4-201ENST00000309602 MIR7-3HGQ8N6C7 128 aa13.74□□□□□ -0.21
LRFN4-201ENST00000309602 PPDPFQ9H3Y8 114 aa13.74□□□□□ -0.21
LRFN4-201ENST00000309602 H3BT86 120 aa13.73□□□□□ -0.21
LRFN4-201ENST00000309602 MT-ATP8P03928 68 aa13.73□□□□□ -0.21
LRFN4-201ENST00000309602 TENM1Q9UKZ4 2725 aa13.73□□□□□ -0.21
LRFN4-201ENST00000309602 LYRM9A8MSI8 78 aa13.73□□□□□ -0.21
LRFN4-201ENST00000309602 CYSRT1A8MQ03 144 aa13.72□□□□□ -0.21
LRFN4-201ENST00000309602 SS18L2Q9UHA2 77 aa13.72□□□□□ -0.21
LRFN4-201ENST00000309602 COX7A2LO14548 114 aa13.71□□□□□ -0.21
LRFN4-201ENST00000309602 PAX4O43316 350 aa13.71□□□□□ -0.21
LRFN4-201ENST00000309602 UBE2WQ96B02 151 aa13.71□□□□□ -0.21
LRFN4-201ENST00000309602 A0A1B0GUV1 79 aa13.71□□□□□ -0.22
LRFN4-201ENST00000309602 IGHV4-28A0A0C4DH34 117 aa13.7□□□□□ -0.22
LRFN4-201ENST00000309602 XCL1P47992 114 aa13.7□□□□□ -0.22
LRFN4-201ENST00000309602 LINC00158P58513 81 aa13.7□□□□□ -0.22
LRFN4-201ENST00000309602 CLPSL2Q6UWE3 100 aa13.7□□□□□ -0.22
LRFN4-201ENST00000309602 CITED1Q99966 193 aa13.69□□□□□ -0.22
LRFN4-201ENST00000309602 APOC4P55056 127 aa13.68□□□□□ -0.22
LRFN4-201ENST00000309602 SS18Q15532 418 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms