RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 SLPIP03973 132 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 SMIM29Q86T20 159 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 SHANK2-AS3Q9BTD1 123 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 MACF1Q9UPN3 7388 aaKnown RBP0.71□□□□□ -2.3
CEP290-201ENST00000309041 CUBNO60494 3623 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 IGKV2D-24A0A075B6R9 120 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 TINCRA0A1B0GVN0 87 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 TMEM233B4DJY2 109 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 FAM19A1Q7Z5A9 133 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 BORCS8Q96FH0 119 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 IGKV2D-30A0A075B6S6 120 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 A0A087WXM4 84 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 H3BMQ9 156 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 IGKV3-15P01624 115 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 HMGN2P05204 90 aaKnown RBP0.71□□□□□ -2.3
CEP290-201ENST00000309041 PMAIP1Q13794 54 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 ZNF56Q15929 161 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 ZNF718Q3SXZ3 478 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 GGTA1PQ4G0N0 100 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 CNIH2Q6PI25 160 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 CCL17Q92583 94 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 NOP10Q9NPE3 64 aaKnown RBP0.71□□□□□ -2.3
CEP290-201ENST00000309041 CRIPTQ9P021 101 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 MYH4Q9Y623 1939 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 IGKV1D-8A0A087WSZ0 117 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 A0A0U1RRA0 63 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 PFN1P07737 140 aaKnown RBP0.71□□□□□ -2.3
CEP290-201ENST00000309041 ZNF32P17041 273 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 BSPH1Q075Z2 132 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 ZNF266Q14584 549 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 IGFL3Q6UXB1 125 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 LINC00305Q7Z4B0 112 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 Q8N976 141 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 PSENENQ9NZ42 101 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 TTC28Q96AY4 2481 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 REV3LO60673 3130 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 AMBPP02760 352 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 HSD52Q0P140 79 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 KRTAP5-10Q6L8G5 202 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 TMEM263Q8WUH6 116 aaKnown RBP0.71□□□□□ -2.3
CEP290-201ENST00000309041 SPTSSAQ969W0 71 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 C16orf74Q96GX8 76 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 C18orf15Q96N68 181 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 C5orf42Q9H799 3197 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 AKAIN1P0CW23 69 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 RPS27AP62979 156 aaKnown RBP0.7□□□□□ -2.3
CEP290-201ENST00000309041 UBA52P62987 128 aaKnown RBP0.7□□□□□ -2.3
CEP290-201ENST00000309041 MRPS21P82921 87 aaKnown RBP0.7□□□□□ -2.3
CEP290-201ENST00000309041 LGALS9CQ6DKI2 356 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 CASC2Q6XLA1 102 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 PRO1854Q9UHT4 67 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 TRIP12Q14669 1992 aaPredicted RBP0.7□□□□□ -2.3
CEP290-201ENST00000309041 WDFY4Q6ZS81 3184 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 H3BRM9 83 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 GABARAPL3Q9BY60 117 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 SPCS1Q9Y6A9 102 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 SDK2Q58EX2 2172 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 TRBV25-1A0A075B6N4 114 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 IGKV1D-33P01593 117 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 IGKV1-33P01594 117 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 C2orf83Q53S99 150 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 Q8N2B8 174 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 Q8N377 158 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 SECTM1Q8WVN6 248 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 RETNQ9HD89 108 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 HDGFL3Q9Y3E1 203 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 STAB1Q9NY15 2570 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 IGKV3D-15A0A087WSY6 115 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 A0A0B4J2C4 111 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 KRTAP29-1A8MX34 341 aaPredicted RBP0.7□□□□□ -2.3
CEP290-201ENST00000309041 M0R2Z0 102 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 CORTO00230 105 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 FAUP35544 74 aaKnown RBP0.7□□□□□ -2.3
CEP290-201ENST00000309041 CSN1S1P47710 185 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 DEFA6Q01524 100 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 FAM229BQ4G0N7 80 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 NMES1Q9C002 83 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 PCNX1Q96RV3 2341 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 DCHS1Q96JQ0 3298 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 ESPL1Q14674 2120 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 LOC400499M0QZD8 3231 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 PIEZO1Q92508 2521 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 CGB1A6NKQ9 187 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 ZNF542PQ5EBM4 170 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 C11orf72Q8NBR9 251 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 ZFHX2Q9C0A1 2572 aaPredicted RBP0.7□□□□□ -2.3
CEP290-201ENST00000309041 IGKV1D-43A0A0B4J1Z2 117 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 ATP5LO75964 103 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 IGLV6-57P01721 117 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 MIR7-3HGQ8N6C7 128 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 TIMM17AQ99595 171 aa0.7□□□□□ -2.3
CEP290-201ENST00000309041 A0A1B0GVY2 172 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 LRCOL1A6NCL2 159 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 LECT2O14960 151 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 C1DQ13901 141 aaKnown RBP0.69□□□□□ -2.3
CEP290-201ENST00000309041 FHL2Q14192 279 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 PRNTQ86SH4 94 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 LINC00596Q86U02 117 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 KRTAP11-1Q8IUC1 163 aa0.69□□□□□ -2.3
CEP290-201ENST00000309041 RNASE8Q8TDE3 154 aaKnown RBP0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms