RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 SYCNQ0VAF6 134 aa9.26□□□□□ -0.93
USP38-201ENST00000307017 IGFL2Q6UWQ7 119 aa9.26□□□□□ -0.93
USP38-201ENST00000307017 FAM19A3Q7Z5A8 133 aa9.26□□□□□ -0.93
USP38-201ENST00000307017 Q8N9L7 120 aa9.26□□□□□ -0.93
USP38-201ENST00000307017 SPRY4Q9C004 299 aa9.26□□□□□ -0.93
USP38-201ENST00000307017 LINC00959A0A1B0GUT2 108 aa9.25□□□□□ -0.93
USP38-201ENST00000307017 CRYGAP11844 174 aa9.25□□□□□ -0.93
USP38-201ENST00000307017 LMO4P61968 165 aa9.25□□□□□ -0.93
USP38-201ENST00000307017 OXLD1Q5BKU9 147 aa9.25□□□□□ -0.93
USP38-201ENST00000307017 NUPR2A6NF83 97 aa9.25□□□□□ -0.93
USP38-201ENST00000307017 ODF3BA8MYP8 253 aa9.25□□□□□ -0.93
USP38-201ENST00000307017 KPRPQ5T749 579 aaPredicted RBP9.25□□□□□ -0.93
USP38-201ENST00000307017 YPEL4Q96NS1 127 aa9.25□□□□□ -0.93
USP38-201ENST00000307017 H3BQ85 93 aa9.25□□□□□ -0.93
USP38-201ENST00000307017 P0C879 139 aa9.25□□□□□ -0.93
USP38-201ENST00000307017 Q6YL49 198 aa9.25□□□□□ -0.93
USP38-201ENST00000307017 SBSPONQ8IVN8 264 aa9.25□□□□□ -0.93
USP38-201ENST00000307017 ADAMTS20P59510 1910 aa9.25□□□□□ -0.93
USP38-201ENST00000307017 GPR179Q6PRD1 2367 aa9.25□□□□□ -0.93
USP38-201ENST00000307017 TSPEAR-AS2P59090 65 aa9.25□□□□□ -0.93
USP38-201ENST00000307017 LINC00208Q96KT6 92 aa9.25□□□□□ -0.93
USP38-201ENST00000307017 AGRNO00468 2067 aa9.24□□□□□ -0.93
USP38-201ENST00000307017 UNQ6190/PRO20217Q6UXQ8 127 aa9.23□□□□□ -0.93
USP38-201ENST00000307017 RIF1Q5UIP0 2472 aaKnown RBP9.23□□□□□ -0.93
USP38-201ENST00000307017 PRLHP81277 87 aa9.23□□□□□ -0.93
USP38-201ENST00000307017 PTPRSQ13332 1948 aa9.23□□□□□ -0.93
USP38-201ENST00000307017 COX7CP15954 63 aa9.23□□□□□ -0.93
USP38-201ENST00000307017 C14orf177Q52M58 125 aa9.23□□□□□ -0.93
USP38-201ENST00000307017 U3KQK5 164 aa9.23□□□□□ -0.93
USP38-201ENST00000307017 IBA57-AS1B1ANH7 110 aa9.23□□□□□ -0.93
USP38-201ENST00000307017 CDSNQ15517 529 aa9.22□□□□□ -0.93
USP38-201ENST00000307017 LY6G6DO95868 133 aa9.22□□□□□ -0.93
USP38-201ENST00000307017 EIF4EBP1Q13541 118 aaPredicted RBP9.22□□□□□ -0.93
USP38-201ENST00000307017 UTRNP46939 3433 aa9.22□□□□□ -0.93
USP38-201ENST00000307017 LINC01547P58512 204 aaPredicted RBP9.21□□□□□ -0.93
USP38-201ENST00000307017 Q6ZSR3 168 aa9.21□□□□□ -0.93
USP38-201ENST00000307017 ADAMTSL4-AS1Q5T5F5 129 aa9.21□□□□□ -0.94
USP38-201ENST00000307017 LST1O00453 97 aa9.21□□□□□ -0.94
USP38-201ENST00000307017 DAZAP2Q15038 168 aaPredicted RBP9.21□□□□□ -0.94
USP38-201ENST00000307017 CYSRT1A8MQ03 144 aa9.2□□□□□ -0.94
USP38-201ENST00000307017 TNFRSF13BO14836 293 aaPredicted RBP9.2□□□□□ -0.94
USP38-201ENST00000307017 COL5A1P20908 1838 aaPredicted RBP9.2□□□□□ -0.94
USP38-201ENST00000307017 TRBV7-6A0A0J9YX20 115 aa9.2□□□□□ -0.94
USP38-201ENST00000307017 IGLV4-60A0A075B6I1 120 aa9.19□□□□□ -0.94
USP38-201ENST00000307017 ZNF73O43830 326 aaPredicted RBP9.19□□□□□ -0.94
USP38-201ENST00000307017 PDE6GP18545 87 aa9.19□□□□□ -0.94
USP38-201ENST00000307017 CPAMD8Q8IZJ3 1885 aa9.19□□□□□ -0.94
USP38-201ENST00000307017 ZNF702PQ9H963 129 aa9.17□□□□□ -0.94
USP38-201ENST00000307017 TRBV10-3A0A0K0K1G6 114 aa9.17□□□□□ -0.94
USP38-201ENST00000307017 Q6ZSN1 163 aa9.17□□□□□ -0.94
USP38-201ENST00000307017 LYRM9A8MSI8 78 aa9.17□□□□□ -0.94
USP38-201ENST00000307017 URB1-AS1Q96HZ7 61 aa9.17□□□□□ -0.94
USP38-201ENST00000307017 CSDC2Q9Y534 153 aaKnown RBP9.16□□□□□ -0.94
USP38-201ENST00000307017 IGLV8-61A0A075B6I0 122 aa9.16□□□□□ -0.94
USP38-201ENST00000307017 M0R378 163 aa9.16□□□□□ -0.94
USP38-201ENST00000307017 LINC00310P59036 64 aa9.16□□□□□ -0.94
USP38-201ENST00000307017 C10orf25Q5T742 122 aa9.16□□□□□ -0.94
USP38-201ENST00000307017 PYGO1Q9Y3Y4 419 aa9.15□□□□□ -0.94
USP38-201ENST00000307017 CD164L2Q6UWJ8 174 aa9.15□□□□□ -0.95
USP38-201ENST00000307017 PTPRBP23467 1997 aa9.14□□□□□ -0.95
USP38-201ENST00000307017 LINC00575Q6W349 94 aa9.14□□□□□ -0.95
USP38-201ENST00000307017 LRRC75A-AS1Q8N1F1 130 aa9.14□□□□□ -0.95
USP38-201ENST00000307017 COL4A4P53420 1690 aaPredicted RBP9.14□□□□□ -0.95
USP38-201ENST00000307017 SMIM9A6NGZ8 99 aa9.13□□□□□ -0.95
USP38-201ENST00000307017 Q8N814 137 aa9.13□□□□□ -0.95
USP38-201ENST00000307017 PRRC2AP48634 2157 aaKnown RBP9.13□□□□□ -0.95
USP38-201ENST00000307017 LINC01556Q5JQF7 62 aa9.13□□□□□ -0.95
USP38-201ENST00000307017 SPINT4Q6UDR6 99 aa9.13□□□□□ -0.95
USP38-201ENST00000307017 TECTAO75443 2155 aa9.12□□□□□ -0.95
USP38-201ENST00000307017 C4orf26Q17RF5 130 aa9.12□□□□□ -0.95
USP38-201ENST00000307017 CDC42SE2Q9NRR3 84 aa9.12□□□□□ -0.95
USP38-201ENST00000307017 OTOGLQ3ZCN5 2332 aa9.12□□□□□ -0.95
USP38-201ENST00000307017 TRBV6-4A0A1B0GX49 114 aa9.11□□□□□ -0.95
USP38-201ENST00000307017 AVPP01185 164 aa9.11□□□□□ -0.95
USP38-201ENST00000307017 C1orf137Q5JT78 98 aa9.11□□□□□ -0.95
USP38-201ENST00000307017 ZFHX2Q9C0A1 2572 aaPredicted RBP9.11□□□□□ -0.95
USP38-201ENST00000307017 J3QL48 77 aa9.11□□□□□ -0.95
USP38-201ENST00000307017 ATP5EP2Q5VTU8 51 aa9.11□□□□□ -0.95
USP38-201ENST00000307017 NTM-AS1Q6ZSK4 140 aa9.11□□□□□ -0.95
USP38-201ENST00000307017 IMUPQ9GZP8 106 aa9.1□□□□□ -0.95
USP38-201ENST00000307017 Q8N3U1 123 aa9.1□□□□□ -0.95
USP38-201ENST00000307017 PCNTO95613 3336 aa9.1□□□□□ -0.95
USP38-201ENST00000307017 IGLV5-52A0A0A0MRZ9 124 aa9.09□□□□□ -0.95
USP38-201ENST00000307017 H0Y9P7 68 aa9.09□□□□□ -0.95
USP38-201ENST00000307017 FHL2Q14192 279 aa9.09□□□□□ -0.95
USP38-201ENST00000307017 TRAV10A0A0B4J240 114 aa9.09□□□□□ -0.95
USP38-201ENST00000307017 LINC01006Q8NI28 216 aa9.09□□□□□ -0.95
USP38-201ENST00000307017 LINC00242Q5T6M2 205 aa9.09□□□□□ -0.95
USP38-201ENST00000307017 REG3GQ6UW15 175 aa9.09□□□□□ -0.95
USP38-201ENST00000307017 CSPG4Q6UVK1 2322 aa9.09□□□□□ -0.95
USP38-201ENST00000307017 DHRS4-AS1Q9P1J3 65 aa9.09□□□□□ -0.95
USP38-201ENST00000307017 CUL9Q8IWT3 2517 aa9.08□□□□□ -0.96
USP38-201ENST00000307017 ODF3Q96PU9 254 aa9.08□□□□□ -0.96
USP38-201ENST00000307017 COX6B2Q6YFQ2 88 aa9.08□□□□□ -0.96
USP38-201ENST00000307017 CHCHD7Q9BUK0 85 aa9.08□□□□□ -0.96
USP38-201ENST00000307017 IGIPA6NJ69 53 aa9.07□□□□□ -0.96
USP38-201ENST00000307017 ACYP2P14621 99 aa9.07□□□□□ -0.96
USP38-201ENST00000307017 KRTAP10-9P60411 292 aa9.07□□□□□ -0.96
USP38-201ENST00000307017 Q9BRP9 147 aa9.07□□□□□ -0.96
USP38-201ENST00000307017 PRORYQ9H606 182 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms