RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 CUL9Q8IWT3 2517 aa11.78□□□□□ -0.52
BRD3-201ENST00000303407 SMIM1B2RUZ4 78 aa11.78□□□□□ -0.52
BRD3-201ENST00000303407 HIVEP2P31629 2446 aa11.78□□□□□ -0.52
BRD3-201ENST00000303407 H0Y9J4 135 aa11.77□□□□□ -0.52
BRD3-201ENST00000303407 C16orf95Q9H693 158 aa11.77□□□□□ -0.52
BRD3-201ENST00000303407 IGHV4-30-4P0DP06 118 aa11.77□□□□□ -0.53
BRD3-201ENST00000303407 ATP5EP2Q5VTU8 51 aa11.77□□□□□ -0.53
BRD3-201ENST00000303407 AMELXQ99217 191 aa11.76□□□□□ -0.53
BRD3-201ENST00000303407 IGKV2-28A0A075B6P5 120 aa11.76□□□□□ -0.53
BRD3-201ENST00000303407 IGKV2D-28P01615 120 aa11.76□□□□□ -0.53
BRD3-201ENST00000303407 SPG11Q96JI7 2443 aa11.75□□□□□ -0.53
BRD3-201ENST00000303407 M0R378 163 aa11.75□□□□□ -0.53
BRD3-201ENST00000303407 FHL2Q14192 279 aa11.75□□□□□ -0.53
BRD3-201ENST00000303407 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.74□□□□□ -0.53
BRD3-201ENST00000303407 NANOS2P60321 138 aaKnown RBP11.74□□□□□ -0.53
BRD3-201ENST00000303407 A0A0J9YWU9 116 aa11.74□□□□□ -0.53
BRD3-201ENST00000303407 IGLV4-60A0A075B6I1 120 aa11.73□□□□□ -0.53
BRD3-201ENST00000303407 BEAN1Q3B7T3 259 aa11.73□□□□□ -0.53
BRD3-201ENST00000303407 OXLD1Q5BKU9 147 aa11.73□□□□□ -0.53
BRD3-201ENST00000303407 UQCRQO14949 82 aa11.73□□□□□ -0.53
BRD3-201ENST00000303407 Q6ZQY7 126 aa11.73□□□□□ -0.53
BRD3-201ENST00000303407 ADAMTSL4-AS1Q5T5F5 129 aa11.72□□□□□ -0.53
BRD3-201ENST00000303407 A0A087WZ39 114 aa11.72□□□□□ -0.53
BRD3-201ENST00000303407 C3orf22Q8N5N4 141 aa11.71□□□□□ -0.53
BRD3-201ENST00000303407 CYSRT1A8MQ03 144 aa11.71□□□□□ -0.53
BRD3-201ENST00000303407 XGP55808 180 aa11.71□□□□□ -0.53
BRD3-201ENST00000303407 TET2Q6N021 2002 aaPredicted RBP11.71□□□□□ -0.53
BRD3-201ENST00000303407 PCSK5Q92824 1860 aa11.71□□□□□ -0.53
BRD3-201ENST00000303407 LINC01546A6NGU7 62 aa11.71□□□□□ -0.54
BRD3-201ENST00000303407 A0A096LNI7 61 aa11.7□□□□□ -0.54
BRD3-201ENST00000303407 CCKP06307 115 aa11.7□□□□□ -0.54
BRD3-201ENST00000303407 BRK1Q8WUW1 75 aa11.7□□□□□ -0.54
BRD3-201ENST00000303407 RETNQ9HD89 108 aa11.69□□□□□ -0.54
BRD3-201ENST00000303407 CSDC2Q9Y534 153 aaKnown RBP11.69□□□□□ -0.54
BRD3-201ENST00000303407 C20orf197Q8N268 126 aa11.69□□□□□ -0.54
BRD3-201ENST00000303407 ACACBO00763 2458 aa11.69□□□□□ -0.54
BRD3-201ENST00000303407 KIF25-AS1Q9Y6Z4 181 aa11.69□□□□□ -0.54
BRD3-201ENST00000303407 ZNF73O43830 326 aaPredicted RBP11.68□□□□□ -0.54
BRD3-201ENST00000303407 MRPL55Q7Z7F7 128 aaKnown RBP11.68□□□□□ -0.54
BRD3-201ENST00000303407 C3orf84H3BNL1 204 aa11.68□□□□□ -0.54
BRD3-201ENST00000303407 C9orf116Q5BN46 136 aaPredicted RBP11.68□□□□□ -0.54
BRD3-201ENST00000303407 RPL37AP8A6NKH3 93 aa11.67□□□□□ -0.54
BRD3-201ENST00000303407 C4orf48Q5BLP8 95 aa11.67□□□□□ -0.54
BRD3-201ENST00000303407 UNQ6190/PRO20217Q6UXQ8 127 aa11.67□□□□□ -0.54
BRD3-201ENST00000303407 DHRS4-AS1Q9P1J3 65 aa11.67□□□□□ -0.54
BRD3-201ENST00000303407 PIEZO2Q9H5I5 2752 aa11.67□□□□□ -0.54
BRD3-201ENST00000303407 MUC7Q8TAX7 377 aa11.66□□□□□ -0.54
BRD3-201ENST00000303407 WDR87Q6ZQQ6 2873 aa11.66□□□□□ -0.54
BRD3-201ENST00000303407 FAM19A4Q96LR4 140 aa11.66□□□□□ -0.54
BRD3-201ENST00000303407 IMUPQ9GZP8 106 aa11.66□□□□□ -0.54
BRD3-201ENST00000303407 LOC107984640A0A0U1RRK4 108 aa11.65□□□□□ -0.54
BRD3-201ENST00000303407 RPL28P46779 137 aaKnown RBP11.64□□□□□ -0.55
BRD3-201ENST00000303407 A0A087WYN8 130 aa11.64□□□□□ -0.55
BRD3-201ENST00000303407 Q8N2B8 174 aa11.64□□□□□ -0.55
BRD3-201ENST00000303407 CSPG4Q6UVK1 2322 aa11.63□□□□□ -0.55
BRD3-201ENST00000303407 PRR3P79522 188 aaKnown RBP11.62□□□□□ -0.55
BRD3-201ENST00000303407 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.62□□□□□ -0.55
BRD3-201ENST00000303407 C11orf72Q8NBR9 251 aa11.61□□□□□ -0.55
BRD3-201ENST00000303407 PTPRBP23467 1997 aa11.61□□□□□ -0.55
BRD3-201ENST00000303407 IGF2RP11717 2491 aa11.61□□□□□ -0.55
BRD3-201ENST00000303407 Q8N814 137 aa11.61□□□□□ -0.55
BRD3-201ENST00000303407 FAM236DA0A1B0GTK5 79 aa11.61□□□□□ -0.55
BRD3-201ENST00000303407 FAM236CP0DP71 79 aa11.61□□□□□ -0.55
BRD3-201ENST00000303407 M0R2N4 97 aa11.6□□□□□ -0.55
BRD3-201ENST00000303407 COL27A1Q8IZC6 1860 aaPredicted RBP11.6□□□□□ -0.55
BRD3-201ENST00000303407 USP17L23D6RBM5 183 aa11.6□□□□□ -0.55
BRD3-201ENST00000303407 PPDPFQ9H3Y8 114 aa11.6□□□□□ -0.55
BRD3-201ENST00000303407 WFDC10BQ8IUB3 73 aa11.59□□□□□ -0.55
BRD3-201ENST00000303407 CCDC179H3BU77 68 aa11.59□□□□□ -0.55
BRD3-201ENST00000303407 LINC00315P59091 139 aa11.59□□□□□ -0.55
BRD3-201ENST00000303407 SPTSSBQ8NFR3 76 aa11.59□□□□□ -0.55
BRD3-201ENST00000303407 IGKV4-1P06312 121 aa11.59□□□□□ -0.55
BRD3-201ENST00000303407 CENPFP49454 3210 aa11.59□□□□□ -0.55
BRD3-201ENST00000303407 Q6JHZ5 121 aa11.59□□□□□ -0.55
BRD3-201ENST00000303407 DNAH12Q6ZR08 3092 aa11.59□□□□□ -0.55
BRD3-201ENST00000303407 SEC61GP60059 68 aa11.58□□□□□ -0.56
BRD3-201ENST00000303407 EGFEM1PQ0D2K5 195 aa11.58□□□□□ -0.56
BRD3-201ENST00000303407 Q6ZTC4 211 aa11.58□□□□□ -0.56
BRD3-201ENST00000303407 TRBV10-3A0A0K0K1G6 114 aa11.58□□□□□ -0.56
BRD3-201ENST00000303407 SERP2Q8N6R1 65 aa11.58□□□□□ -0.56
BRD3-201ENST00000303407 WNK1Q9H4A3 2382 aa11.58□□□□□ -0.56
BRD3-201ENST00000303407 PRRC2AP48634 2157 aaKnown RBP11.58□□□□□ -0.56
BRD3-201ENST00000303407 FAM240AA0A1B0GVK7 77 aa11.58□□□□□ -0.56
BRD3-201ENST00000303407 C6orf223Q8N319 242 aa11.57□□□□□ -0.56
BRD3-201ENST00000303407 A0A1B0GUV1 79 aa11.57□□□□□ -0.56
BRD3-201ENST00000303407 LRCOL1A6NCL2 159 aa11.56□□□□□ -0.56
BRD3-201ENST00000303407 UTRNP46939 3433 aa11.55□□□□□ -0.56
BRD3-201ENST00000303407 NTM-AS1Q6ZSK4 140 aa11.55□□□□□ -0.56
BRD3-201ENST00000303407 Q6Q795 121 aa11.54□□□□□ -0.56
BRD3-201ENST00000303407 V9GYY9 64 aa11.54□□□□□ -0.56
BRD3-201ENST00000303407 ATRXP46100 2492 aa11.54□□□□□ -0.56
BRD3-201ENST00000303407 SNURFQ9Y675 71 aa11.53□□□□□ -0.56
BRD3-201ENST00000303407 COX7CP15954 63 aa11.53□□□□□ -0.56
BRD3-201ENST00000303407 NAV2Q8IVL1 2488 aa11.53□□□□□ -0.56
BRD3-201ENST00000303407 PLAC8L1A1L4L8 177 aa11.53□□□□□ -0.56
BRD3-201ENST00000303407 LYPD5Q6UWN5 251 aa11.53□□□□□ -0.56
BRD3-201ENST00000303407 NCOR2Q9Y618 2525 aa11.52□□□□□ -0.57
BRD3-201ENST00000303407 HRCT1Q6UXD1 115 aa11.51□□□□□ -0.57
BRD3-201ENST00000303407 LINC01561Q8N1V8 128 aa11.51□□□□□ -0.57
BRD3-201ENST00000303407 PTPN13Q12923 2485 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms