RNA–Protein interactions for RNA: ENST00000299572.9

CENPN-201, Transcript of centromere protein N, humanhuman

TSL 1 (best) BASIC

Gene CENPN, Length 1,398 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPN-201ENST00000299572 ERASQ7Z444 233 aa13.35□□□□□ -0.27
CENPN-201ENST00000299572 DNAH8Q96JB1 4490 aa13.35□□□□□ -0.27
CENPN-201ENST00000299572 MYCBP2O75592 4640 aa13.35□□□□□ -0.27
CENPN-201ENST00000299572 A0A096LNJ9 63 aa13.34□□□□□ -0.27
CENPN-201ENST00000299572 RNASE13Q5GAN3 156 aaKnown RBP13.34□□□□□ -0.27
CENPN-201ENST00000299572 ENHOQ6UWT2 76 aa13.34□□□□□ -0.27
CENPN-201ENST00000299572 MRPS36P82909 103 aaKnown RBP13.33□□□□□ -0.27
CENPN-201ENST00000299572 Q6ZUT4 128 aa13.33□□□□□ -0.27
CENPN-201ENST00000299572 TMEM141Q96I45 108 aa13.33□□□□□ -0.27
CENPN-201ENST00000299572 C1orf43Q9BWL3 253 aa13.33□□□□□ -0.27
CENPN-201ENST00000299572 PDZD11Q5EBL8 140 aa13.32□□□□□ -0.28
CENPN-201ENST00000299572 COA6Q5JTJ3 125 aaKnown RBP13.32□□□□□ -0.28
CENPN-201ENST00000299572 SCXQ7RTU7 201 aa13.32□□□□□ -0.28
CENPN-201ENST00000299572 TIMM17AQ99595 171 aa13.32□□□□□ -0.28
CENPN-201ENST00000299572 VCX2Q9H322 139 aa13.32□□□□□ -0.28
CENPN-201ENST00000299572 IGLV4-3A0A075B6K6 122 aa13.32□□□□□ -0.28
CENPN-201ENST00000299572 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.32□□□□□ -0.28
CENPN-201ENST00000299572 Q6ZN92 141 aa13.32□□□□□ -0.28
CENPN-201ENST00000299572 FAM104AQ969W3 186 aa13.32□□□□□ -0.28
CENPN-201ENST00000299572 PRR34Q9NV39 138 aa13.32□□□□□ -0.28
CENPN-201ENST00000299572 S100A6P06703 90 aa13.31□□□□□ -0.28
CENPN-201ENST00000299572 C14orf177Q52M58 125 aa13.31□□□□□ -0.28
CENPN-201ENST00000299572 PAPPA-AS1Q5QFB9 102 aa13.31□□□□□ -0.28
CENPN-201ENST00000299572 J3QL48 77 aa13.3□□□□□ -0.28
CENPN-201ENST00000299572 ATP5LO75964 103 aa13.3□□□□□ -0.28
CENPN-201ENST00000299572 NPSP0C0P6 89 aa13.3□□□□□ -0.28
CENPN-201ENST00000299572 ZC2HC1BQ5TFG8 222 aa13.3□□□□□ -0.28
CENPN-201ENST00000299572 TRAV13-1A0A0B4J241 112 aa13.29□□□□□ -0.28
CENPN-201ENST00000299572 LEPROTL1O95214 131 aa13.29□□□□□ -0.28
CENPN-201ENST00000299572 FABP4P15090 132 aa13.29□□□□□ -0.28
CENPN-201ENST00000299572 MIAQ16674 131 aa13.29□□□□□ -0.28
CENPN-201ENST00000299572 TEX43Q6ZNM6 134 aa13.29□□□□□ -0.28
CENPN-201ENST00000299572 IGLV10-54A0A075B6I4 117 aa13.28□□□□□ -0.28
CENPN-201ENST00000299572 LINC00959A0A1B0GUT2 108 aa13.28□□□□□ -0.28
CENPN-201ENST00000299572 SS18Q15532 418 aa13.28□□□□□ -0.28
CENPN-201ENST00000299572 CHAC1Q9BUX1 264 aa13.28□□□□□ -0.28
CENPN-201ENST00000299572 TRAV8-4A0A0B4J246 113 aa13.27□□□□□ -0.29
CENPN-201ENST00000299572 IFITM10A6NMD0 228 aa13.27□□□□□ -0.29
CENPN-201ENST00000299572 C2orf88Q9BSF0 95 aa13.27□□□□□ -0.29
CENPN-201ENST00000299572 PRSS1P07477 247 aa13.26□□□□□ -0.29
CENPN-201ENST00000299572 IFI27L1Q96BM0 104 aa13.26□□□□□ -0.29
CENPN-201ENST00000299572 AMELXQ99217 191 aa13.26□□□□□ -0.29
CENPN-201ENST00000299572 HSPB8Q9UJY1 196 aa13.26□□□□□ -0.29
CENPN-201ENST00000299572 LINC00173Q6ZV60 143 aa13.25□□□□□ -0.29
CENPN-201ENST00000299572 USP17L23D6RBM5 183 aa13.24□□□□□ -0.29
CENPN-201ENST00000299572 PMVKQ15126 192 aa13.24□□□□□ -0.29
CENPN-201ENST00000299572 CIRBP-AS1Q8TBR5 109 aa13.24□□□□□ -0.29
CENPN-201ENST00000299572 CHCHD10Q8WYQ3 142 aaPredicted RBP13.24□□□□□ -0.29
CENPN-201ENST00000299572 CST9LQ9H4G1 147 aa13.24□□□□□ -0.29
CENPN-201ENST00000299572 SNRPEP62304 92 aaKnown RBP13.23□□□□□ -0.29
CENPN-201ENST00000299572 KRTAP29-1A8MX34 341 aaPredicted RBP13.22□□□□□ -0.29
CENPN-201ENST00000299572 CCL25O15444 150 aa13.22□□□□□ -0.29
CENPN-201ENST00000299572 XCL1P47992 114 aa13.22□□□□□ -0.29
CENPN-201ENST00000299572 GAGE12HA6NDE8 117 aa13.21□□□□□ -0.29
CENPN-201ENST00000299572 S100A2P29034 98 aa13.21□□□□□ -0.29
CENPN-201ENST00000299572 TMA7Q9Y2S6 64 aaKnown RBP13.21□□□□□ -0.29
CENPN-201ENST00000299572 UBE2D1P51668 147 aa13.2□□□□□ -0.3
CENPN-201ENST00000299572 H0Y8G0 127 aa13.19□□□□□ -0.3
CENPN-201ENST00000299572 KRTAP10-4P60372 401 aaPredicted RBP13.19□□□□□ -0.3
CENPN-201ENST00000299572 LINC00242Q5T6M2 205 aa13.19□□□□□ -0.3
CENPN-201ENST00000299572 CD164L2Q6UWJ8 174 aa13.19□□□□□ -0.3
CENPN-201ENST00000299572 HIST3H2BBQ8N257 126 aa13.19□□□□□ -0.3
CENPN-201ENST00000299572 MAP1LC3CQ9BXW4 147 aa13.19□□□□□ -0.3
CENPN-201ENST00000299572 A0A0J9YXV3 536 aa13.18□□□□□ -0.3
CENPN-201ENST00000299572 C5orf52A6NGY3 159 aa13.18□□□□□ -0.3
CENPN-201ENST00000299572 KRTAP26-1Q6PEX3 210 aa13.18□□□□□ -0.3
CENPN-201ENST00000299572 PACRGQ96M98 296 aaPredicted RBP13.18□□□□□ -0.3
CENPN-201ENST00000299572 SEC11AP67812 179 aa13.16□□□□□ -0.3
CENPN-201ENST00000299572 COX6A2Q02221 97 aa13.16□□□□□ -0.3
CENPN-201ENST00000299572 FOXI1Q12951 378 aa13.16□□□□□ -0.3
CENPN-201ENST00000299572 GEMIN7Q9H840 131 aaKnown RBP13.16□□□□□ -0.3
CENPN-201ENST00000299572 CHTOPQ9Y3Y2 248 aaKnown RBP13.16□□□□□ -0.3
CENPN-201ENST00000299572 TRAV12-1A0A0B4J245 112 aa13.15□□□□□ -0.3
CENPN-201ENST00000299572 C5orf38Q86SI9 138 aa13.15□□□□□ -0.3
CENPN-201ENST00000299572 C9orf163Q8N9P6 203 aa13.15□□□□□ -0.3
CENPN-201ENST00000299572 FAM19A3Q7Z5A8 133 aa13.13□□□□□ -0.31
CENPN-201ENST00000299572 HIST1H2BLQ99880 126 aa13.13□□□□□ -0.31
CENPN-201ENST00000299572 IGHV3OR16-9A0A0B4J2B5 98 aa13.12□□□□□ -0.31
CENPN-201ENST00000299572 TINCRA0A1B0GVN0 87 aa13.12□□□□□ -0.31
CENPN-201ENST00000299572 COX7A2LO14548 114 aa13.12□□□□□ -0.31
CENPN-201ENST00000299572 MALP21145 153 aa13.12□□□□□ -0.31
CENPN-201ENST00000299572 KRTDAPP60985 99 aa13.12□□□□□ -0.31
CENPN-201ENST00000299572 HERVK_113P63121 156 aa13.12□□□□□ -0.31
CENPN-201ENST00000299572 SYS1-DBNDD2H3BUS1 97 aa13.11□□□□□ -0.31
CENPN-201ENST00000299572 C3orf79P0CE67 100 aa13.1□□□□□ -0.31
CENPN-201ENST00000299572 RPL37AP61513 92 aaKnown RBP13.1□□□□□ -0.31
CENPN-201ENST00000299572 CFAP161Q6P656 301 aa13.1□□□□□ -0.31
CENPN-201ENST00000299572 MRPL35Q9NZE8 188 aaKnown RBP13.1□□□□□ -0.31
CENPN-201ENST00000299572 F8VRH5 84 aa13.09□□□□□ -0.31
CENPN-201ENST00000299572 IGLC3P0DOY3 106 aa13.09□□□□□ -0.31
CENPN-201ENST00000299572 ODF1Q14990 250 aa13.09□□□□□ -0.31
CENPN-201ENST00000299572 PET117Q6UWS5 81 aa13.09□□□□□ -0.31
CENPN-201ENST00000299572 LINC00469Q8N7U9 141 aa13.09□□□□□ -0.31
CENPN-201ENST00000299572 CDKN2A-AS1Q9UH64 79 aa13.09□□□□□ -0.31
CENPN-201ENST00000299572 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.09□□□□□ -0.31
CENPN-201ENST00000299572 IGLV4-69A0A075B6H9 119 aa13.08□□□□□ -0.31
CENPN-201ENST00000299572 hDV102S1A0JD36 115 aa13.08□□□□□ -0.31
CENPN-201ENST00000299572 OXTP01178 125 aa13.08□□□□□ -0.31
CENPN-201ENST00000299572 PMCHL2Q9BQD1 86 aa13.08□□□□□ -0.31
CENPN-201ENST00000299572 CNBPP62633 177 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms