RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 JMJD1CQ15652 2540 aa14.55□□□□□ -0.08
HPS6-201ENST00000299238 IGLV4-3A0A075B6K6 122 aa14.54□□□□□ -0.08
HPS6-201ENST00000299238 ATOX1O00244 68 aa14.54□□□□□ -0.08
HPS6-201ENST00000299238 CXCL5P42830 114 aa14.54□□□□□ -0.08
HPS6-201ENST00000299238 C2CD3Q4AC94 2353 aa14.53□□□□□ -0.08
HPS6-201ENST00000299238 TMEM258P61165 79 aa14.53□□□□□ -0.08
HPS6-201ENST00000299238 MIAQ16674 131 aa14.52□□□□□ -0.08
HPS6-201ENST00000299238 DEFB114Q30KQ6 69 aa14.52□□□□□ -0.08
HPS6-201ENST00000299238 Q6ZSN1 163 aa14.52□□□□□ -0.08
HPS6-201ENST00000299238 FAM104AQ969W3 186 aa14.52□□□□□ -0.08
HPS6-201ENST00000299238 TIRAPP58753 221 aa14.52□□□□□ -0.09
HPS6-201ENST00000299238 SPANXDQ9BXN6 97 aa14.51□□□□□ -0.09
HPS6-201ENST00000299238 UPK3BQ9BT76 320 aa14.51□□□□□ -0.09
HPS6-201ENST00000299238 ESM1Q9NQ30 184 aa14.51□□□□□ -0.09
HPS6-201ENST00000299238 NDUFA12Q9UI09 145 aa14.51□□□□□ -0.09
HPS6-201ENST00000299238 A0A087WVE0 104 aa14.5□□□□□ -0.09
HPS6-201ENST00000299238 CITED2Q99967 270 aaPredicted RBP14.5□□□□□ -0.09
HPS6-201ENST00000299238 C22orf24Q9Y442 160 aa14.5□□□□□ -0.09
HPS6-201ENST00000299238 CD28P10747 220 aa14.5□□□□□ -0.09
HPS6-201ENST00000299238 C11orf44Q8N8P7 122 aa14.5□□□□□ -0.09
HPS6-201ENST00000299238 SPANXCQ9NY87 97 aa14.5□□□□□ -0.09
HPS6-201ENST00000299238 PYGO1Q9Y3Y4 419 aa14.49□□□□□ -0.09
HPS6-201ENST00000299238 IGHV3-38A0A0C4DH36 116 aa14.49□□□□□ -0.09
HPS6-201ENST00000299238 PIK3CD-AS1Q5SR53 167 aa14.49□□□□□ -0.09
HPS6-201ENST00000299238 IGKV3D-7A0A0C4DH55 119 aa14.48□□□□□ -0.09
HPS6-201ENST00000299238 A0A1W2PRX2 142 aa14.48□□□□□ -0.09
HPS6-201ENST00000299238 RPL18AQ02543 176 aaKnown RBP14.48□□□□□ -0.09
HPS6-201ENST00000299238 ZNF415Q09FC8 603 aa14.48□□□□□ -0.09
HPS6-201ENST00000299238 C11orf72Q8NBR9 251 aa14.47□□□□□ -0.09
HPS6-201ENST00000299238 PDZD2O15018 2839 aa14.47□□□□□ -0.09
HPS6-201ENST00000299238 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.46□□□□□ -0.09
HPS6-201ENST00000299238 IGKV2-29A2NJV5 120 aaPredicted RBP14.46□□□□□ -0.09
HPS6-201ENST00000299238 BAALC-AS2P0C853 105 aa14.46□□□□□ -0.09
HPS6-201ENST00000299238 KRTAP1-1Q07627 177 aa14.45□□□□□ -0.1
HPS6-201ENST00000299238 LINC00467Q9BRT7 94 aa14.45□□□□□ -0.1
HPS6-201ENST00000299238 MTORP42345 2549 aa14.45□□□□□ -0.1
HPS6-201ENST00000299238 ODF3L2Q3SX64 289 aa14.45□□□□□ -0.1
HPS6-201ENST00000299238 ACANP16112 2415 aa14.44□□□□□ -0.1
HPS6-201ENST00000299238 SETXQ7Z333 2677 aaKnown RBP14.44□□□□□ -0.1
HPS6-201ENST00000299238 INSP01308 110 aa14.44□□□□□ -0.1
HPS6-201ENST00000299238 IGHV3OR16-12A0A075B7B8 117 aa14.44□□□□□ -0.1
HPS6-201ENST00000299238 MRPS36P82909 103 aaKnown RBP14.44□□□□□ -0.1
HPS6-201ENST00000299238 SERP2Q8N6R1 65 aa14.44□□□□□ -0.1
HPS6-201ENST00000299238 A0A0U1RRA0 63 aa14.43□□□□□ -0.1
HPS6-201ENST00000299238 COX7A2LO14548 114 aa14.43□□□□□ -0.1
HPS6-201ENST00000299238 MRAPQ8TCY5 172 aa14.43□□□□□ -0.1
HPS6-201ENST00000299238 CHCHD7Q9BUK0 85 aa14.43□□□□□ -0.1
HPS6-201ENST00000299238 CCL24O00175 119 aa14.43□□□□□ -0.1
HPS6-201ENST00000299238 BEAN1Q3B7T3 259 aa14.43□□□□□ -0.1
HPS6-201ENST00000299238 XCL2Q9UBD3 114 aa14.43□□□□□ -0.1
HPS6-201ENST00000299238 IGHV1-58A0A0C4DH39 117 aa14.42□□□□□ -0.1
HPS6-201ENST00000299238 FAM218AQ96MZ4 157 aa14.42□□□□□ -0.1
HPS6-201ENST00000299238 IGHV3-53P01767 116 aa14.41□□□□□ -0.1
HPS6-201ENST00000299238 Q9HAA7 133 aa14.41□□□□□ -0.1
HPS6-201ENST00000299238 UBE2D4Q9Y2X8 147 aa14.4□□□□□ -0.1
HPS6-201ENST00000299238 ANK3Q12955 4377 aaKnown RBP14.4□□□□□ -0.1
HPS6-201ENST00000299238 FHL2Q14192 279 aa14.4□□□□□ -0.1
HPS6-201ENST00000299238 C9orf129Q5T035 196 aaKnown RBP14.39□□□□□ -0.11
HPS6-201ENST00000299238 LINC00336Q6ZUF6 198 aa14.39□□□□□ -0.11
HPS6-201ENST00000299238 LINC01561Q8N1V8 128 aa14.39□□□□□ -0.11
HPS6-201ENST00000299238 VSIG2Q96IQ7 327 aa14.39□□□□□ -0.11
HPS6-201ENST00000299238 ITPR2Q14571 2701 aa14.39□□□□□ -0.11
HPS6-201ENST00000299238 PLA2G2AP14555 144 aa14.38□□□□□ -0.11
HPS6-201ENST00000299238 STHQ8IWL8 128 aa14.38□□□□□ -0.11
HPS6-201ENST00000299238 LINC01006Q8NI28 216 aa14.37□□□□□ -0.11
HPS6-201ENST00000299238 ZNF625Q96I27 306 aaPredicted RBP14.37□□□□□ -0.11
HPS6-201ENST00000299238 USP17L23D6RBM5 183 aa14.36□□□□□ -0.11
HPS6-201ENST00000299238 RNASE1P07998 156 aaKnown RBP14.36□□□□□ -0.11
HPS6-201ENST00000299238 TINCRA0A1B0GVN0 87 aa14.35□□□□□ -0.11
HPS6-201ENST00000299238 J3QKU1 62 aa14.35□□□□□ -0.11
HPS6-201ENST00000299238 PFN2P35080 140 aa14.35□□□□□ -0.11
HPS6-201ENST00000299238 C1orf43Q9BWL3 253 aa14.35□□□□□ -0.11
HPS6-201ENST00000299238 C1orf158Q8N1D5 194 aa14.34□□□□□ -0.11
HPS6-201ENST00000299238 C16orf95Q9H693 158 aa14.34□□□□□ -0.11
HPS6-201ENST00000299238 IL17DQ8TAD2 202 aa14.34□□□□□ -0.11
HPS6-201ENST00000299238 LINC00846Q9NV44 126 aa14.34□□□□□ -0.11
HPS6-201ENST00000299238 HELZ2Q9BYK8 2649 aaKnown RBP14.34□□□□□ -0.11
HPS6-201ENST00000299238 C14orf132Q9NPU4 83 aa14.33□□□□□ -0.11
HPS6-201ENST00000299238 KMT2BQ9UMN6 2715 aaPredicted RBP14.33□□□□□ -0.11
HPS6-201ENST00000299238 INAFM2P0DMQ5 153 aa14.33□□□□□ -0.12
HPS6-201ENST00000299238 LINC00308Q8TCZ7 52 aa14.33□□□□□ -0.12
HPS6-201ENST00000299238 PKIGQ9Y2B9 76 aa14.33□□□□□ -0.12
HPS6-201ENST00000299238 MALP21145 153 aa14.32□□□□□ -0.12
HPS6-201ENST00000299238 TRGV1A0A0A0MS02 117 aa14.32□□□□□ -0.12
HPS6-201ENST00000299238 SOSTDC1Q6X4U4 206 aa14.32□□□□□ -0.12
HPS6-201ENST00000299238 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.32□□□□□ -0.12
HPS6-201ENST00000299238 UNC79Q9P2D8 2635 aa14.32□□□□□ -0.12
HPS6-201ENST00000299238 RPL35AP18077 110 aaKnown RBP14.31□□□□□ -0.12
HPS6-201ENST00000299238 CDKN2A-AS1Q9UH64 79 aa14.31□□□□□ -0.12
HPS6-201ENST00000299238 DNAL4O96015 105 aa14.31□□□□□ -0.12
HPS6-201ENST00000299238 PRO0628Q9UI54 55 aa14.31□□□□□ -0.12
HPS6-201ENST00000299238 PRIMA1Q86XR5 153 aa14.3□□□□□ -0.12
HPS6-201ENST00000299238 HILS1P60008 231 aa14.29□□□□□ -0.12
HPS6-201ENST00000299238 DGAT2L7PQ6IED9 249 aa14.28□□□□□ -0.12
HPS6-201ENST00000299238 COX6A2Q02221 97 aa14.28□□□□□ -0.12
HPS6-201ENST00000299238 Q6ZTI0 123 aa14.28□□□□□ -0.12
HPS6-201ENST00000299238 FAM222AQ5U5X8 452 aa14.27□□□□□ -0.13
HPS6-201ENST00000299238 Q6JHZ5 121 aa14.27□□□□□ -0.13
HPS6-201ENST00000299238 IGLV5-45A0A087WSX0 123 aa14.26□□□□□ -0.13
HPS6-201ENST00000299238 WFDC9Q8NEX5 89 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms